| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110834561
Identifier: 110834561
GI number: 110834561
Start: 1934096
End: 1936459
Strand: Direct
Name: 110834561
Synonym: ABO_1700
Alternate gene names: NA
Gene position: 1934096-1936459 (Clockwise)
Preceding gene: 110834560
Following gene: 110834562
Centisome position: 61.99
GC content: 51.27
Gene sequence:
>2364_bases ATGAAAAACCATTGGGATTCACATGGCCCCTTTTCACTAGGGATATTGTTCTTTTTGCTTTGCGCTCTGTCTGCACCGGT TACCAGCGCCCCGCTCCCTCCCAAGTACCTCACCAATACCTCACCCAATTACCATGACGACATTCATCCTATTTTCGAAA AGAAATGTTTAGCCTGTCATGGCTGCTATGACGCCCCCTGCCAATTGAAACTTGAAGCGGTAGAAGGCCTAGACCGGGGG GCCAGCAAGAAAAACGTTTACGATGGGGCTCGTACTCAAACCATCTCCCCAACGCGCTTGTTCAAGGATGCACAAACCAC GGCACAATGGCGTGACAAGGGCTTCTATTCTGTCATCGACAGCACCTCTGGCCTGCAGGATTCTTTGCTTTATCAAATGC TGGCGTTAGGAAAAAAACACAGTTTTAAACCGAACCAGAAACTTCCAGACGATATTGTCTTGGGCCTAGCTCGGCAGAAC GAATGCCCCGCACCAGATGAATTCGATGACTATGCCGAAAGTCACCCCATGGAAGGCATGCCATTGGCGGTCGCAGGGCT GACCGACAGCGAATTTACGACCATCCGTCAATGGTTGGAGCAAGGGGCCCCTTTGGAGCCTAAAATAATTACTCCCACCA ACGAAGAGCAGCAACTGATTGCCGACTGGGAAGCTTTTCTCAACCAAAGAGACCTAAAACACCAGCTGGTGGCCCGCTGG CTATACGAACACCTTTTTCTTGCCCACCTGTACCTGGACAAAGGTCAAGACAGCAAGCCGGCACATTTTTTTAAACTTCA TCGCTCTAGCACCCCTCCCGGGGAGCCGATTAAGCCAGTAGCCACCGATCGCCCCAATGGCATGCCACCGGAAAATTTCT GGTACCGTATTGCACCTGTGCCCGGCACCTTAGTGCACAAAACACACATTACCTTTGGCCTAGCCAAGGACAAACTGGCT AGGACCAAAGAGCACTTCTTCAGCACTGACTGGAGCGTGGAAACGTTACCAGGCTATGGCTACGAACAACGTGCCAATCC CTTTGTTACCTTTTCCGCTATCCCAGCCCGGGCCCGCTACCAGTTTATGCTGGATGAAGCCGAATACTTTGTTCGTACCT TCATTCGCGGTCCGGTTTGTCGCGGGCAAGTAGCCACCGATGTAATTCGCGATCATTTCTGGGCCGTGTTTCAGGCCCCG GAACAGGACCTTTACATCACCGATAACAATTACCGCGCGCAAGTCAGTGATCTGTTGGGCTTACCCGGTCAAGACGATGA CCTATTGGCTTTAGGGCCACAGTGGCTCAAGTACAGTGAAAAACGTAACGACTACCTGAAAGCTCGCAAACAGGCCTATG GCACCAATAAACCCAAAGGCCCAGATTGGGATTCATTGTGGGATGGCGATGGGGATAATCGCAATGCACTACTAACCATC TTCCGTCACCACGATAACTCCTCGGTACGCAAAGGCCTGATCGGCGACTTGCCTTTAACGACCTGGGTGATGGATTACCC GTTATTCGAACGCAGCTATTACAACCTAGTGGTTAACTTTAATGTTTTCGGATCCGTGTCCCATCAGGCGCAGACTCGCC TCTACTTTGATCTGATCCGTAATGGCGCAGAACAGAACACGCTCCGCTACCTCCCAGCAAAACTGCGCCAACTCGTGTTG GCCAACTGGTATCAAAACACCGGGAAACTGCGGTTGGCGATCAGTTATGAATCCGTAGATACGGATCTGCCCACGAGTAT CCAGTTCGATACCAGCACCCCAATGAACGAGTTCAACAATAATCTGCTGATTAAATTTGCCAAACTAAACGCCCGCCCAG ACCCGATAAACCGTTGTGACGGTGAAAACTGCCAACGGCCCAATGTCTCTGCCTGGAAACAGGACGCAGACCACATCCTC AGCAGTATCTCTTCACGGCGCGCGGCCAACCTGCAAGCCGTCAATTTCATGCCGGAAGTCAGCATGATCCACGTAAGGGG CAACAAGGGTGAACAGGAAATCTATTCCTTATTCCGAAACCGGGCACACACCAATGTCGCGTTCATGATGGGTGAATCTC TGCGCTACCAACCGCCACTGGACACCTTAACCCTGTATCCCGGCGTCTTGGCGAGCTATCCCAACTTCATGTTCCTGGTG CAGGAAGATCAGCTGCAAGCTTTCGTTACTCAAATGGAAGCGGTGAAAACGGAGAAAGATTTTACCGAACTAGTGGATGC CTATGGTATTCGCCGCACTCACCCTGAGTTTTGGCAATACTTCCATGCGCTGAACCAGTATCTGGAAAAGCACGAGCCAA CCCAGGCTGGCATTCTCGATATGAACCGGTACGAAAACCTTTGA
Upstream 100 bases:
>100_bases CGGCTTTTTACAAAACAACAGATGCTGATAGGGGGCCAGCCATGGCCGGCTCTGTCCGCCCCCGCTACACTGTCAATCCG TTATAGGGAGATTCGGGAAT
Downstream 100 bases:
>100_bases AAAAACTGCATCAGCAGCAATAACAAGACCACGCGGGAGGGATGAGTGCCATACGGCAGCTGCCCTCTCCGTGTGATCTA ATTGAAAGTAACACATTGAG
Product: esterified fatty acid cis/trans isomerase family protein
Products: NA
Alternate protein names: Fatty Acid Cistrans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase; Cis/Trans Isomerase; 9-Hexadecenoic Acid Cis-Trans Isomerase; Fatty Acid Cis/Trans Isomerase Superfamily; Fatty Acid Cis/Trans Isomerase Superfamily Protein; Type IIA poisomerase B Subunit; Fatty Acid Cis-Trans Isomerase; Exported Fatty Acid Cis/Trans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase Family Protein
Number of amino acids: Translated: 787; Mature: 787
Protein sequence:
>787_residues MKNHWDSHGPFSLGILFFLLCALSAPVTSAPLPPKYLTNTSPNYHDDIHPIFEKKCLACHGCYDAPCQLKLEAVEGLDRG ASKKNVYDGARTQTISPTRLFKDAQTTAQWRDKGFYSVIDSTSGLQDSLLYQMLALGKKHSFKPNQKLPDDIVLGLARQN ECPAPDEFDDYAESHPMEGMPLAVAGLTDSEFTTIRQWLEQGAPLEPKIITPTNEEQQLIADWEAFLNQRDLKHQLVARW LYEHLFLAHLYLDKGQDSKPAHFFKLHRSSTPPGEPIKPVATDRPNGMPPENFWYRIAPVPGTLVHKTHITFGLAKDKLA RTKEHFFSTDWSVETLPGYGYEQRANPFVTFSAIPARARYQFMLDEAEYFVRTFIRGPVCRGQVATDVIRDHFWAVFQAP EQDLYITDNNYRAQVSDLLGLPGQDDDLLALGPQWLKYSEKRNDYLKARKQAYGTNKPKGPDWDSLWDGDGDNRNALLTI FRHHDNSSVRKGLIGDLPLTTWVMDYPLFERSYYNLVVNFNVFGSVSHQAQTRLYFDLIRNGAEQNTLRYLPAKLRQLVL ANWYQNTGKLRLAISYESVDTDLPTSIQFDTSTPMNEFNNNLLIKFAKLNARPDPINRCDGENCQRPNVSAWKQDADHIL SSISSRRAANLQAVNFMPEVSMIHVRGNKGEQEIYSLFRNRAHTNVAFMMGESLRYQPPLDTLTLYPGVLASYPNFMFLV QEDQLQAFVTQMEAVKTEKDFTELVDAYGIRRTHPEFWQYFHALNQYLEKHEPTQAGILDMNRYENL
Sequences:
>Translated_787_residues MKNHWDSHGPFSLGILFFLLCALSAPVTSAPLPPKYLTNTSPNYHDDIHPIFEKKCLACHGCYDAPCQLKLEAVEGLDRG ASKKNVYDGARTQTISPTRLFKDAQTTAQWRDKGFYSVIDSTSGLQDSLLYQMLALGKKHSFKPNQKLPDDIVLGLARQN ECPAPDEFDDYAESHPMEGMPLAVAGLTDSEFTTIRQWLEQGAPLEPKIITPTNEEQQLIADWEAFLNQRDLKHQLVARW LYEHLFLAHLYLDKGQDSKPAHFFKLHRSSTPPGEPIKPVATDRPNGMPPENFWYRIAPVPGTLVHKTHITFGLAKDKLA RTKEHFFSTDWSVETLPGYGYEQRANPFVTFSAIPARARYQFMLDEAEYFVRTFIRGPVCRGQVATDVIRDHFWAVFQAP EQDLYITDNNYRAQVSDLLGLPGQDDDLLALGPQWLKYSEKRNDYLKARKQAYGTNKPKGPDWDSLWDGDGDNRNALLTI FRHHDNSSVRKGLIGDLPLTTWVMDYPLFERSYYNLVVNFNVFGSVSHQAQTRLYFDLIRNGAEQNTLRYLPAKLRQLVL ANWYQNTGKLRLAISYESVDTDLPTSIQFDTSTPMNEFNNNLLIKFAKLNARPDPINRCDGENCQRPNVSAWKQDADHIL SSISSRRAANLQAVNFMPEVSMIHVRGNKGEQEIYSLFRNRAHTNVAFMMGESLRYQPPLDTLTLYPGVLASYPNFMFLV QEDQLQAFVTQMEAVKTEKDFTELVDAYGIRRTHPEFWQYFHALNQYLEKHEPTQAGILDMNRYENL >Mature_787_residues MKNHWDSHGPFSLGILFFLLCALSAPVTSAPLPPKYLTNTSPNYHDDIHPIFEKKCLACHGCYDAPCQLKLEAVEGLDRG ASKKNVYDGARTQTISPTRLFKDAQTTAQWRDKGFYSVIDSTSGLQDSLLYQMLALGKKHSFKPNQKLPDDIVLGLARQN ECPAPDEFDDYAESHPMEGMPLAVAGLTDSEFTTIRQWLEQGAPLEPKIITPTNEEQQLIADWEAFLNQRDLKHQLVARW LYEHLFLAHLYLDKGQDSKPAHFFKLHRSSTPPGEPIKPVATDRPNGMPPENFWYRIAPVPGTLVHKTHITFGLAKDKLA RTKEHFFSTDWSVETLPGYGYEQRANPFVTFSAIPARARYQFMLDEAEYFVRTFIRGPVCRGQVATDVIRDHFWAVFQAP EQDLYITDNNYRAQVSDLLGLPGQDDDLLALGPQWLKYSEKRNDYLKARKQAYGTNKPKGPDWDSLWDGDGDNRNALLTI FRHHDNSSVRKGLIGDLPLTTWVMDYPLFERSYYNLVVNFNVFGSVSHQAQTRLYFDLIRNGAEQNTLRYLPAKLRQLVL ANWYQNTGKLRLAISYESVDTDLPTSIQFDTSTPMNEFNNNLLIKFAKLNARPDPINRCDGENCQRPNVSAWKQDADHIL SSISSRRAANLQAVNFMPEVSMIHVRGNKGEQEIYSLFRNRAHTNVAFMMGESLRYQPPLDTLTLYPGVLASYPNFMFLV QEDQLQAFVTQMEAVKTEKDFTELVDAYGIRRTHPEFWQYFHALNQYLEKHEPTQAGILDMNRYENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90159; Mature: 90159
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNHWDSHGPFSLGILFFLLCALSAPVTSAPLPPKYLTNTSPNYHDDIHPIFEKKCLACH CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHC GCYDAPCQLKLEAVEGLDRGASKKNVYDGARTQTISPTRLFKDAQTTAQWRDKGFYSVID CCCCCCCCEEEHHHHCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC STSGLQDSLLYQMLALGKKHSFKPNQKLPDDIVLGLARQNECPAPDEFDDYAESHPMEGM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC PLAVAGLTDSEFTTIRQWLEQGAPLEPKIITPTNEEQQLIADWEAFLNQRDLKHQLVARW CEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYEHLFLAHLYLDKGQDSKPAHFFKLHRSSTPPGEPIKPVATDRPNGMPPENFWYRIAPV HHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC PGTLVHKTHITFGLAKDKLARTKEHFFSTDWSVETLPGYGYEQRANPFVTFSAIPARARY CCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHH QFMLDEAEYFVRTFIRGPVCRGQVATDVIRDHFWAVFQAPEQDLYITDNNYRAQVSDLLG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHC LPGQDDDLLALGPQWLKYSEKRNDYLKARKQAYGTNKPKGPDWDSLWDGDGDNRNALLTI CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE FRHHDNSSVRKGLIGDLPLTTWVMDYPLFERSYYNLVVNFNVFGSVSHQAQTRLYFDLIR EEECCCCHHHHCCCCCCCHHHHHHHCCHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHH NGAEQNTLRYLPAKLRQLVLANWYQNTGKLRLAISYESVDTDLPTSIQFDTSTPMNEFNN CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCHHHCCC NLLIKFAKLNARPDPINRCDGENCQRPNVSAWKQDADHILSSISSRRAANLQAVNFMPEV CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE SMIHVRGNKGEQEIYSLFRNRAHTNVAFMMGESLRYQPPLDTLTLYPGVLASYPNFMFLV EEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHCCCCEEEEE QEDQLQAFVTQMEAVKTEKDFTELVDAYGIRRTHPEFWQYFHALNQYLEKHEPTQAGILD EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE MNRYENL CHHHCCC >Mature Secondary Structure MKNHWDSHGPFSLGILFFLLCALSAPVTSAPLPPKYLTNTSPNYHDDIHPIFEKKCLACH CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHC GCYDAPCQLKLEAVEGLDRGASKKNVYDGARTQTISPTRLFKDAQTTAQWRDKGFYSVID CCCCCCCCEEEHHHHCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC STSGLQDSLLYQMLALGKKHSFKPNQKLPDDIVLGLARQNECPAPDEFDDYAESHPMEGM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC PLAVAGLTDSEFTTIRQWLEQGAPLEPKIITPTNEEQQLIADWEAFLNQRDLKHQLVARW CEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYEHLFLAHLYLDKGQDSKPAHFFKLHRSSTPPGEPIKPVATDRPNGMPPENFWYRIAPV HHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC PGTLVHKTHITFGLAKDKLARTKEHFFSTDWSVETLPGYGYEQRANPFVTFSAIPARARY CCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHH QFMLDEAEYFVRTFIRGPVCRGQVATDVIRDHFWAVFQAPEQDLYITDNNYRAQVSDLLG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHC LPGQDDDLLALGPQWLKYSEKRNDYLKARKQAYGTNKPKGPDWDSLWDGDGDNRNALLTI CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE FRHHDNSSVRKGLIGDLPLTTWVMDYPLFERSYYNLVVNFNVFGSVSHQAQTRLYFDLIR EEECCCCHHHHCCCCCCCHHHHHHHCCHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHH NGAEQNTLRYLPAKLRQLVLANWYQNTGKLRLAISYESVDTDLPTSIQFDTSTPMNEFNN CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCHHHCCC NLLIKFAKLNARPDPINRCDGENCQRPNVSAWKQDADHILSSISSRRAANLQAVNFMPEV CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE SMIHVRGNKGEQEIYSLFRNRAHTNVAFMMGESLRYQPPLDTLTLYPGVLASYPNFMFLV EEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHCCCCEEEEE QEDQLQAFVTQMEAVKTEKDFTELVDAYGIRRTHPEFWQYFHALNQYLEKHEPTQAGILD EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE MNRYENL CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA