| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834442
Identifier: 110834442
GI number: 110834442
Start: 1803868
End: 1805337
Strand: Direct
Name: 110834442
Synonym: ABO_1581
Alternate gene names: NA
Gene position: 1803868-1805337 (Clockwise)
Preceding gene: 110834441
Following gene: 110834445
Centisome position: 57.81
GC content: 54.42
Gene sequence:
>1470_bases ATGAAAGGCACCCTCAAACAGCTCGAACGCGCCATCGACAAGGCGACTACCTACGATGAATGGTATGAAGCCAGCCAGGA ACACGACCGCCTTTCCGGCGCGGACAGATGGAAAGAAGTAGACCGCTCGCCCTACTACGACTATGAATTAATTCGTAATC GGCTCTGGCAGATTCGTCAGGCCCGCGAGCGAAACGATGTGAATAAGCTGGTTTTCCATTTGCACGAAGGCCTGCATGGC AACTTAGGCAACATTTCCAACCCTCGCCTTTATCAACACAGCCGCGTGGGTACTAAACGCCTCATCGAAAACTATCTGAG CGAAGTTTCCACCGCGCTGAATTACCTGTGTGATAGCAACTTCAAGGAATTCGGGCTGAAAGAAAAACTCGATTTCTTTG AAACCACCGGCCAAGCCTTCGGACAAAGCTGCCTGATGTTATCCGGCGGTGCCGCGCTGGGCCTATTCCATATTGGTGTG GCCCGCTGCCTGTGGAAACAAAATTTGCTGCCCTCAGTAATATCCGGTTCCAGTGCTGGCAGCATCATTGCTTCGGTTGT CGGCACCCATAATGATGAAGAGTTAAAAGTAAAACTGGAGCCGGAAAACATCTATCTGGAAGCGTTCAAGGTGCTGGGCT GGAAGGGCCTGGTGCGCGGCACGCCGGTACTCGATGGCGACCACCTGGAAGCCTGCCTGGAAGAAAATATCTCCGACATG ACCTTTGAAGAGGCCTATCGGCACACCGGGCGCGAAATCAATATTACCGTCAGCCCCTATGATCGTAACCAACGTGCGCG CCTGCTGAACTGGCGCACCTCCCCCAACGTGCTGATCCGCAAGGCCTCGCTGGCTTCCTGCGCTATTCCCAGCATCTACC CGCCGGTTTCCCTGTGGGCGAAGAACATCGATGGTGAGCGCGTACCCTACATTCCTGGGCGCAAATTCGTCGATGGCTCC ATTGTTGACGATCTTCCCATCCGCCGGCTGGCACGCCTCTATGGCGTCAACCACTCCATCGTCAGCCAAACCAACCCCCA CATCGTGCCCTTCCTGTCGCGCAACGAAAACACCGACAGCTCCCTGAGCACACTGGGCGATTGGGCTTTGCGCAACGTAT CCATGAACCTGCGCTATGGCCTACAACTGGTACAGCACCAGGTAGCCTCCAACGACCTTGGGCTAATTATCGACAAGGCA AAAAGTATGGTGACGCAGAAATACATTGGTGACATCAACATGATCCCTCCCCGCCAACCACTCAATGCCCTGCGGATTCT GAACAACCCCACACTGCAAGATGTGCAAACCTATATCCGCAAAGGTGAACAAGCGACCTGGCCAAAACTCGACATGGTTG CCAACACCACATGCATAAGCCGCACCTTCCGCGACTGCCGCGCACGCCTGGACCGCATTGAAGAACGCATGCTGGACCGA GTAAACATGACCTCGATAGCTAACCAGTGA
Upstream 100 bases:
>100_bases ACCCCTCAGTACTTTTTATCCTACAAGCCCTTAAATCTTGCCCCCACCCCTGTCTATACTGACATCAGTCAATGACAACA ACTCATGGTGGAGAGCCTCA
Downstream 100 bases:
>100_bases GCCTCAGCACGGCAGCAACAACTAGAAGCCGTGCTTATTTCACCGTGTGCGCCATTATTAATAACAACCCCGCTGGCCCT GAACGTGGCCAGCGGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase Patatin Family; Patatin Family Protein; Esterase Of Alpha-Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MKGTLKQLERAIDKATTYDEWYEASQEHDRLSGADRWKEVDRSPYYDYELIRNRLWQIRQARERNDVNKLVFHLHEGLHG NLGNISNPRLYQHSRVGTKRLIENYLSEVSTALNYLCDSNFKEFGLKEKLDFFETTGQAFGQSCLMLSGGAALGLFHIGV ARCLWKQNLLPSVISGSSAGSIIASVVGTHNDEELKVKLEPENIYLEAFKVLGWKGLVRGTPVLDGDHLEACLEENISDM TFEEAYRHTGREINITVSPYDRNQRARLLNWRTSPNVLIRKASLASCAIPSIYPPVSLWAKNIDGERVPYIPGRKFVDGS IVDDLPIRRLARLYGVNHSIVSQTNPHIVPFLSRNENTDSSLSTLGDWALRNVSMNLRYGLQLVQHQVASNDLGLIIDKA KSMVTQKYIGDINMIPPRQPLNALRILNNPTLQDVQTYIRKGEQATWPKLDMVANTTCISRTFRDCRARLDRIEERMLDR VNMTSIANQ
Sequences:
>Translated_489_residues MKGTLKQLERAIDKATTYDEWYEASQEHDRLSGADRWKEVDRSPYYDYELIRNRLWQIRQARERNDVNKLVFHLHEGLHG NLGNISNPRLYQHSRVGTKRLIENYLSEVSTALNYLCDSNFKEFGLKEKLDFFETTGQAFGQSCLMLSGGAALGLFHIGV ARCLWKQNLLPSVISGSSAGSIIASVVGTHNDEELKVKLEPENIYLEAFKVLGWKGLVRGTPVLDGDHLEACLEENISDM TFEEAYRHTGREINITVSPYDRNQRARLLNWRTSPNVLIRKASLASCAIPSIYPPVSLWAKNIDGERVPYIPGRKFVDGS IVDDLPIRRLARLYGVNHSIVSQTNPHIVPFLSRNENTDSSLSTLGDWALRNVSMNLRYGLQLVQHQVASNDLGLIIDKA KSMVTQKYIGDINMIPPRQPLNALRILNNPTLQDVQTYIRKGEQATWPKLDMVANTTCISRTFRDCRARLDRIEERMLDR VNMTSIANQ >Mature_489_residues MKGTLKQLERAIDKATTYDEWYEASQEHDRLSGADRWKEVDRSPYYDYELIRNRLWQIRQARERNDVNKLVFHLHEGLHG NLGNISNPRLYQHSRVGTKRLIENYLSEVSTALNYLCDSNFKEFGLKEKLDFFETTGQAFGQSCLMLSGGAALGLFHIGV ARCLWKQNLLPSVISGSSAGSIIASVVGTHNDEELKVKLEPENIYLEAFKVLGWKGLVRGTPVLDGDHLEACLEENISDM TFEEAYRHTGREINITVSPYDRNQRARLLNWRTSPNVLIRKASLASCAIPSIYPPVSLWAKNIDGERVPYIPGRKFVDGS IVDDLPIRRLARLYGVNHSIVSQTNPHIVPFLSRNENTDSSLSTLGDWALRNVSMNLRYGLQLVQHQVASNDLGLIIDKA KSMVTQKYIGDINMIPPRQPLNALRILNNPTLQDVQTYIRKGEQATWPKLDMVANTTCISRTFRDCRARLDRIEERMLDR VNMTSIANQ
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322942, Length=478, Percent_Identity=36.1924686192469, Blast_Score=276, Evalue=7e-75, Organism=Saccharomyces cerevisiae, GI6324655, Length=480, Percent_Identity=29.7916666666667, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6323973, Length=381, Percent_Identity=29.6587926509186, Blast_Score=153, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55656; Mature: 55656
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTLKQLERAIDKATTYDEWYEASQEHDRLSGADRWKEVDRSPYYDYELIRNRLWQIRQ CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH ARERNDVNKLVFHLHEGLHGNLGNISNPRLYQHSRVGTKRLIENYLSEVSTALNYLCDSN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FKEFGLKEKLDFFETTGQAFGQSCLMLSGGAALGLFHIGVARCLWKQNLLPSVISGSSAG HHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHH SIIASVVGTHNDEELKVKLEPENIYLEAFKVLGWKGLVRGTPVLDGDHLEACLEENISDM HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHCCCCCC TFEEAYRHTGREINITVSPYDRNQRARLLNWRTSPNVLIRKASLASCAIPSIYPPVSLWA HHHHHHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCEEEECCHHHHCCCCCCCCHHHHH KNIDGERVPYIPGRKFVDGSIVDDLPIRRLARLYGVNHSIVSQTNPHIVPFLSRNENTDS HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCCH SLSTLGDWALRNVSMNLRYGLQLVQHQVASNDLGLIIDKAKSMVTQKYIGDINMIPPRQP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCC LNALRILNNPTLQDVQTYIRKGEQATWPKLDMVANTTCISRTFRDCRARLDRIEERMLDR HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNMTSIANQ HHHHHHCCC >Mature Secondary Structure MKGTLKQLERAIDKATTYDEWYEASQEHDRLSGADRWKEVDRSPYYDYELIRNRLWQIRQ CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH ARERNDVNKLVFHLHEGLHGNLGNISNPRLYQHSRVGTKRLIENYLSEVSTALNYLCDSN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FKEFGLKEKLDFFETTGQAFGQSCLMLSGGAALGLFHIGVARCLWKQNLLPSVISGSSAG HHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHH SIIASVVGTHNDEELKVKLEPENIYLEAFKVLGWKGLVRGTPVLDGDHLEACLEENISDM HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHCCCCCC TFEEAYRHTGREINITVSPYDRNQRARLLNWRTSPNVLIRKASLASCAIPSIYPPVSLWA HHHHHHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCEEEECCHHHHCCCCCCCCHHHHH KNIDGERVPYIPGRKFVDGSIVDDLPIRRLARLYGVNHSIVSQTNPHIVPFLSRNENTDS HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCCH SLSTLGDWALRNVSMNLRYGLQLVQHQVASNDLGLIIDKAKSMVTQKYIGDINMIPPRQP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCC LNALRILNNPTLQDVQTYIRKGEQATWPKLDMVANTTCISRTFRDCRARLDRIEERMLDR HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNMTSIANQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA