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The map label for this gene is oruR [H]

Identifier: 110834441

GI number: 110834441

Start: 1802712

End: 1803749

Strand: Direct

Name: oruR [H]

Synonym: ABO_1580

Alternate gene names: 110834441

Gene position: 1802712-1803749 (Clockwise)

Preceding gene: 110834440

Following gene: 110834442

Centisome position: 57.78

GC content: 57.32

Gene sequence:

>1038_bases
ATGGACGCATTGGGCCAGATTTGTAGCGCTGCACTGCAACAATACCTGGCCCACGCAGACGCCCGTGGGCTGGATACGAT
TGCCGCACTGCAACACGCCAATCTGGACCCAGCGCATATCCAGAAGCCGGATACCCGCATCCATGGTCAGCATTTCCAGA
CCTTACTGCACGCTCTTATCGAGCAATCCGGCGACCCGCTGTTCGGTTTACATACCTCCGAATTCGTGCAACCTGGCTCT
TATAATGTCATGGGCTACATTGCCATGAGCGCCAGCACACTCCAGCAAGCCCTGTCGAAAGTCAGTTTGTATGAAAAGCT
GGTAGGCGACATGGGCACCACGCAAACCACCCTTGATGCCCATCAGGCCGCGATTCGCTGGGATTGCCTGTACCGAGAAC
AACCAGCGCGCCAACACCTGATTGATAACGTGCTTGGCTCCTGGGTGCGTTATGCCCGCTGGCTCACTGGCAACGACCAG
TTGGCACCGGATCAAGTCTGGCTGGAACACCCCACGCCCCCGGCCGCCCAAGTGGACGAATACCGGCGCGTATTTCTTTG
TGATGTGCTGTTCGAACAACCCTGTTCTGCTTTGGTGGGGCCGCCACAGTTACTCCAGCAACCCATCCGCCAACCAGACC
CGCTGTTGCTCTCCACTCTGGAAGCCCACGCCATCCAGCAGCTGAATCAGCTAGGCGTAGATACCAACCTCAGCCAACGA
GTGAAGCAATGCATCCAAGACGCCATTGGCCACTCCCTGCCGCGCAAGGAAACCGTCGCCGAACGGTTAGGCATGAACGT
TCGTACCCTGCACCGCCGGCTAGCCGACGAACAGCAAAGCTGGCAAAAGCTGCTTGATTCCGTGCGCCTGCAACAGGCAC
GGCACCTGCTCACCACCACCAGCTTGCCCCAGGCCGACATTGCCGCAGCCCTAGGTTATTCCGATATTCGTTCTTTTCAG
CGCAGCTTCAAACGCCATACCACCATGACCCCAGGGCAGTATCGAAACACGCCCAAAGATACGCAAATAAACTCATAG

Upstream 100 bases:

>100_bases
GGCCAAGGATAGCGGCGCAGCGGAAAGTTACCGCCCAGGCGAAACGGAAATTTCCGCTCAGGTACAAATCACTTTTGAAC
TAGACTGATCAGGCATCGTC

Downstream 100 bases:

>100_bases
TTGCGGGCGTTATTATGTACCCCTCAGTACTTTTTATCCTACAAGCCCTTAAATCTTGCCCCCACCCCTGTCTATACTGA
CATCAGTCAATGACAACAAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MDALGQICSAALQQYLAHADARGLDTIAALQHANLDPAHIQKPDTRIHGQHFQTLLHALIEQSGDPLFGLHTSEFVQPGS
YNVMGYIAMSASTLQQALSKVSLYEKLVGDMGTTQTTLDAHQAAIRWDCLYREQPARQHLIDNVLGSWVRYARWLTGNDQ
LAPDQVWLEHPTPPAAQVDEYRRVFLCDVLFEQPCSALVGPPQLLQQPIRQPDPLLLSTLEAHAIQQLNQLGVDTNLSQR
VKQCIQDAIGHSLPRKETVAERLGMNVRTLHRRLADEQQSWQKLLDSVRLQQARHLLTTTSLPQADIAAALGYSDIRSFQ
RSFKRHTTMTPGQYRNTPKDTQINS

Sequences:

>Translated_345_residues
MDALGQICSAALQQYLAHADARGLDTIAALQHANLDPAHIQKPDTRIHGQHFQTLLHALIEQSGDPLFGLHTSEFVQPGS
YNVMGYIAMSASTLQQALSKVSLYEKLVGDMGTTQTTLDAHQAAIRWDCLYREQPARQHLIDNVLGSWVRYARWLTGNDQ
LAPDQVWLEHPTPPAAQVDEYRRVFLCDVLFEQPCSALVGPPQLLQQPIRQPDPLLLSTLEAHAIQQLNQLGVDTNLSQR
VKQCIQDAIGHSLPRKETVAERLGMNVRTLHRRLADEQQSWQKLLDSVRLQQARHLLTTTSLPQADIAAALGYSDIRSFQ
RSFKRHTTMTPGQYRNTPKDTQINS
>Mature_345_residues
MDALGQICSAALQQYLAHADARGLDTIAALQHANLDPAHIQKPDTRIHGQHFQTLLHALIEQSGDPLFGLHTSEFVQPGS
YNVMGYIAMSASTLQQALSKVSLYEKLVGDMGTTQTTLDAHQAAIRWDCLYREQPARQHLIDNVLGSWVRYARWLTGNDQ
LAPDQVWLEHPTPPAAQVDEYRRVFLCDVLFEQPCSALVGPPQLLQQPIRQPDPLLLSTLEAHAIQQLNQLGVDTNLSQR
VKQCIQDAIGHSLPRKETVAERLGMNVRTLHRRLADEQQSWQKLLDSVRLQQARHLLTTTSLPQADIAAALGYSDIRSFQ
RSFKRHTTMTPGQYRNTPKDTQINS

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38721; Mature: 38721

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALGQICSAALQQYLAHADARGLDTIAALQHANLDPAHIQKPDTRIHGQHFQTLLHALI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH
EQSGDPLFGLHTSEFVQPGSYNVMGYIAMSASTLQQALSKVSLYEKLVGDMGTTQTTLDA
HCCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HQAAIRWDCLYREQPARQHLIDNVLGSWVRYARWLTGNDQLAPDQVWLEHPTPPAAQVDE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHH
YRRVFLCDVLFEQPCSALVGPPQLLQQPIRQPDPLLLSTLEAHAIQQLNQLGVDTNLSQR
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
VKQCIQDAIGHSLPRKETVAERLGMNVRTLHRRLADEQQSWQKLLDSVRLQQARHLLTTT
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SLPQADIAAALGYSDIRSFQRSFKRHTTMTPGQYRNTPKDTQINS
CCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDALGQICSAALQQYLAHADARGLDTIAALQHANLDPAHIQKPDTRIHGQHFQTLLHALI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH
EQSGDPLFGLHTSEFVQPGSYNVMGYIAMSASTLQQALSKVSLYEKLVGDMGTTQTTLDA
HCCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HQAAIRWDCLYREQPARQHLIDNVLGSWVRYARWLTGNDQLAPDQVWLEHPTPPAAQVDE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHH
YRRVFLCDVLFEQPCSALVGPPQLLQQPIRQPDPLLLSTLEAHAIQQLNQLGVDTNLSQR
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
VKQCIQDAIGHSLPRKETVAERLGMNVRTLHRRLADEQQSWQKLLDSVRLQQARHLLTTT
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SLPQADIAAALGYSDIRSFQRSFKRHTTMTPGQYRNTPKDTQINS
CCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]