| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834445
Identifier: 110834445
GI number: 110834445
Start: 1807503
End: 1807799
Strand: Direct
Name: 110834445
Synonym: ABO_1584
Alternate gene names: NA
Gene position: 1807503-1807799 (Clockwise)
Preceding gene: 110834442
Following gene: 110834446
Centisome position: 57.93
GC content: 53.54
Gene sequence:
>297_bases ATGCATACCGATAATCATCACCGCTGGATGTACGATTTTCTGGATGAAATGGGCCTTCCCCTCAGAGCCGAACTCTTAGG CTATGTGTTGTACGAACCGCAGCAAAATGCCTTTATCGCCGGCAACAACACCGTAACCGCCCCCTCATCACCCCAGCCAC TGGTGAAACCCTGTGCCTGGGCGCACTGCTACCCTTGTATCGTGCAGGCGAGCAATGCCGCTAATACATTGGGAGCAGAA TACGAAATCCATGCGCTTTTCCAGCTCGACAGCCGCTATCTGTCCTGCCCGCTATAA
Upstream 100 bases:
>100_bases AGCAATGGCTCACAAAAACCGACAAAAATACCAAACAACTACTATCCACCCTCTGCAACGGCTGGCGTAACGTGTTGGGA AAATACTAGAGAACCAATCG
Downstream 100 bases:
>100_bases TGATAATTACTTCACCGGATCGCGAGCGAGAGCTCGCCCAGAATCAACCAAGAATGCTCCAGACAAAAAAAACCGCCTGA AGGCGGTTTTTTTTATGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MHTDNHHRWMYDFLDEMGLPLRAELLGYVLYEPQQNAFIAGNNTVTAPSSPQPLVKPCAWAHCYPCIVQASNAANTLGAE YEIHALFQLDSRYLSCPL
Sequences:
>Translated_98_residues MHTDNHHRWMYDFLDEMGLPLRAELLGYVLYEPQQNAFIAGNNTVTAPSSPQPLVKPCAWAHCYPCIVQASNAANTLGAE YEIHALFQLDSRYLSCPL >Mature_98_residues MHTDNHHRWMYDFLDEMGLPLRAELLGYVLYEPQQNAFIAGNNTVTAPSSPQPLVKPCAWAHCYPCIVQASNAANTLGAE YEIHALFQLDSRYLSCPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11052; Mature: 11052
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDNHHRWMYDFLDEMGLPLRAELLGYVLYEPQQNAFIAGNNTVTAPSSPQPLVKPCAW CCCCCCCHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEECCCEEECCCCCCCCCCCCCH AHCYPCIVQASNAANTLGAEYEIHALFQLDSRYLSCPL HCCCCCEEECCCCCCCCCCCEEEEEEEEECCCEECCCC >Mature Secondary Structure MHTDNHHRWMYDFLDEMGLPLRAELLGYVLYEPQQNAFIAGNNTVTAPSSPQPLVKPCAW CCCCCCCHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEECCCEEECCCCCCCCCCCCCH AHCYPCIVQASNAANTLGAEYEIHALFQLDSRYLSCPL HCCCCCEEECCCCCCCCCCCEEEEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA