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The map label for this gene is rssA [H]

Identifier: 110833655

GI number: 110833655

Start: 887181

End: 888110

Strand: Direct

Name: rssA [H]

Synonym: ABO_0794

Alternate gene names: 110833655

Gene position: 887181-888110 (Clockwise)

Preceding gene: 110833654

Following gene: 110833658

Centisome position: 28.43

GC content: 55.7

Gene sequence:

>930_bases
ATGACGACCGAGATGGGTAGCCAAGAGCCTGTCCAGCCTGTTGTCGGCTTGGCGTTAGGCAGTGGCTCGGCCAGGGGGTG
GGCACATATTGGCGTTATTCAGGCGCTGGATGAGATCGGCGTTCATCCTCAGGTGGTGGCAGGTACCTCTATTGGCGCCT
TGGTGGGCGGCGCTTATGTCACCGGTTCGCTCAACGCCTTTGCCGATTGGGTCGAGTCCCTGACGGTGAAAGATGTATTT
GGTTTGCTGGATATCAGCTTTTCCGGAGGTATGGTGAAGGGGGAGAAGCTGTTTAGCTTTTTCCAGAACAACCACGATAA
TCCCGAAATAGAAACCCTGGATAAGAAGTTGGTCACCGTTGCCACGGACATGGCCAGCGGCCGCGAAGTTTGGATAACCA
AAGGGCGCATGTTGGATGCTGCACGGGCTTCTTGTGCTTTGCCTGGCCTGTTTTCTCCGGTGAAGATGCAGGGGCGCTGG
ATGCTCGATGGCGGTTTGGTTAACCCCGTACCTGTTTCTGCGGCTCGAGCCATGGGTGCAGATGTTGTGATCGCGGTAAA
CTTGAATGCTCAGCTGGTGGGCGCTCACCTGTCACGGGACACTCGTAGCCAGGCAGAGGGTGAAGAGAGCACCGCTGAAG
AGCGCAGCATCTGGCAAAAAATGATGGATTATTTTGCCTCAGGCGATGGTCAGGACCCGGGGTTTTTTGATGTAGTGGCG
TCTAGTATCAATATCATGCAGGACCGTATTACCCGCTCGCGTATGGCTGGCGACCCACCAGAGGTGACACTGGTGCCAAT
GCTGGAAGATTTTGCGCTGATGGACTTCCACCGCGCGAAGGAAGCGATAGCAGAAGGGCGTGCGCTGGTTAAACGCTATG
AAGCCGATATTCTCGCTTGGGTGGGTTCGCCGATCGCGGACAGAGTTTGA

Upstream 100 bases:

>100_bases
GGTTGCTCTCGGATGATGAAAAGCGAGAAGTGTTTCGCCGTATTGATCAGCGCATGAATGGCGAGCCAGCCCCCTGCGTA
GTGCGTAAGGAGAACGATAA

Downstream 100 bases:

>100_bases
AGCTGCTGGATAATTGAGGGCTGGCGTTGGCGTTCCGCCTGCGCTTCTCGCACAGTAATCAATTATCCATCCGTAGTGAT
TAATTAACTTCTGCCCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTTEMGSQEPVQPVVGLALGSGSARGWAHIGVIQALDEIGVHPQVVAGTSIGALVGGAYVTGSLNAFADWVESLTVKDVF
GLLDISFSGGMVKGEKLFSFFQNNHDNPEIETLDKKLVTVATDMASGREVWITKGRMLDAARASCALPGLFSPVKMQGRW
MLDGGLVNPVPVSAARAMGADVVIAVNLNAQLVGAHLSRDTRSQAEGEESTAEERSIWQKMMDYFASGDGQDPGFFDVVA
SSINIMQDRITRSRMAGDPPEVTLVPMLEDFALMDFHRAKEAIAEGRALVKRYEADILAWVGSPIADRV

Sequences:

>Translated_309_residues
MTTEMGSQEPVQPVVGLALGSGSARGWAHIGVIQALDEIGVHPQVVAGTSIGALVGGAYVTGSLNAFADWVESLTVKDVF
GLLDISFSGGMVKGEKLFSFFQNNHDNPEIETLDKKLVTVATDMASGREVWITKGRMLDAARASCALPGLFSPVKMQGRW
MLDGGLVNPVPVSAARAMGADVVIAVNLNAQLVGAHLSRDTRSQAEGEESTAEERSIWQKMMDYFASGDGQDPGFFDVVA
SSINIMQDRITRSRMAGDPPEVTLVPMLEDFALMDFHRAKEAIAEGRALVKRYEADILAWVGSPIADRV
>Mature_308_residues
TTEMGSQEPVQPVVGLALGSGSARGWAHIGVIQALDEIGVHPQVVAGTSIGALVGGAYVTGSLNAFADWVESLTVKDVFG
LLDISFSGGMVKGEKLFSFFQNNHDNPEIETLDKKLVTVATDMASGREVWITKGRMLDAARASCALPGLFSPVKMQGRWM
LDGGLVNPVPVSAARAMGADVVIAVNLNAQLVGAHLSRDTRSQAEGEESTAEERSIWQKMMDYFASGDGQDPGFFDVVAS
SINIMQDRITRSRMAGDPPEVTLVPMLEDFALMDFHRAKEAIAEGRALVKRYEADILAWVGSPIADRV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=186, Percent_Identity=31.7204301075269, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI260656043, Length=186, Percent_Identity=31.7204301075269, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI260656041, Length=186, Percent_Identity=31.7204301075269, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI116256487, Length=186, Percent_Identity=31.7204301075269, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI260656039, Length=186, Percent_Identity=31.7204301075269, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI148727290, Length=189, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI148727335, Length=189, Percent_Identity=32.8042328042328, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI226510936, Length=299, Percent_Identity=41.4715719063545, Blast_Score=240, Evalue=7e-65,
Organism=Drosophila melanogaster, GI281376913, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571388, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33096; Mature: 32965

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEMGSQEPVQPVVGLALGSGSARGWAHIGVIQALDEIGVHPQVVAGTSIGALVGGAYV
CCCCCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCHHE
TGSLNAFADWVESLTVKDVFGLLDISFSGGMVKGEKLFSFFQNNHDNPEIETLDKKLVTV
ECCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
ATDMASGREVWITKGRMLDAARASCALPGLFSPVKMQGRWMLDGGLVNPVPVSAARAMGA
HHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCEECCEEEECCCCCCCCCCHHHHHCCC
DVVIAVNLNAQLVGAHLSRDTRSQAEGEESTAEERSIWQKMMDYFASGDGQDPGFFDVVA
CEEEEEECCCEEEEHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SSINIMQDRITRSRMAGDPPEVTLVPMLEDFALMDFHRAKEAIAEGRALVKRYEADILAW
HHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGSPIADRV
HCCCHHCCC
>Mature Secondary Structure 
TTEMGSQEPVQPVVGLALGSGSARGWAHIGVIQALDEIGVHPQVVAGTSIGALVGGAYV
CCCCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCHHE
TGSLNAFADWVESLTVKDVFGLLDISFSGGMVKGEKLFSFFQNNHDNPEIETLDKKLVTV
ECCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
ATDMASGREVWITKGRMLDAARASCALPGLFSPVKMQGRWMLDGGLVNPVPVSAARAMGA
HHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCEECCEEEECCCCCCCCCCHHHHHCCC
DVVIAVNLNAQLVGAHLSRDTRSQAEGEESTAEERSIWQKMMDYFASGDGQDPGFFDVVA
CEEEEEECCCEEEEHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SSINIMQDRITRSRMAGDPPEVTLVPMLEDFALMDFHRAKEAIAEGRALVKRYEADILAW
HHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGSPIADRV
HCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]