| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ydhL [C]
Identifier: 110833654
GI number: 110833654
Start: 886975
End: 887184
Strand: Direct
Name: ydhL [C]
Synonym: ABO_0793
Alternate gene names: 110833654
Gene position: 886975-887184 (Clockwise)
Preceding gene: 110833653
Following gene: 110833655
Centisome position: 28.43
GC content: 50.95
Gene sequence:
>210_bases ATGACTGAAAGACAGCTAGTGTCGCCGTGTGTGTCGATTTGCGCATTGGATGAAGATGATATCTGTGTGGGCTGTTTCCG TACCGGTGGAGAGATTTCCATCTGGGGGTTGCTCTCGGATGATGAAAAGCGAGAAGTGTTTCGCCGTATTGATCAGCGCA TGAATGGCGAGCCAGCCCCCTGCGTAGTGCGTAAGGAGAACGATAAATGA
Upstream 100 bases:
>100_bases ATTGGTGAGGGGCATAAGGCTATGTTGACCATGGGCAGCATGCACTATGTGGCCCACGCGAAAGAGTTTGCTCAGCACCT GGAGGTGGACGAGCGGTTCC
Downstream 100 bases:
>100_bases CGACCGAGATGGGTAGCCAAGAGCCTGTCCAGCCTGTTGTCGGCTTGGCGTTAGGCAGTGGCTCGGCCAGGGGGTGGGCA CATATTGGCGTTATTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTERQLVSPCVSICALDEDDICVGCFRTGGEISIWGLLSDDEKREVFRRIDQRMNGEPAPCVVRKENDK
Sequences:
>Translated_69_residues MTERQLVSPCVSICALDEDDICVGCFRTGGEISIWGLLSDDEKREVFRRIDQRMNGEPAPCVVRKENDK >Mature_68_residues TERQLVSPCVSICALDEDDICVGCFRTGGEISIWGLLSDDEKREVFRRIDQRMNGEPAPCVVRKENDK
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7831; Mature: 7700
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERQLVSPCVSICALDEDDICVGCFRTGGEISIWGLLSDDEKREVFRRIDQRMNGEPAP CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC CVVRKENDK EEEEECCCC >Mature Secondary Structure TERQLVSPCVSICALDEDDICVGCFRTGGEISIWGLLSDDEKREVFRRIDQRMNGEPAP CCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC CVVRKENDK EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA