Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is groES

Identifier: 110833494

GI number: 110833494

Start: 699261

End: 699551

Strand: Direct

Name: groES

Synonym: ABO_0633

Alternate gene names: 110833494

Gene position: 699261-699551 (Clockwise)

Preceding gene: 110833484

Following gene: 110833495

Centisome position: 22.41

GC content: 55.33

Gene sequence:

>291_bases
ATGAGCATCCGTCCTTTGCATGATCGCGTGCTGGTTCGCCGTGAAGAGGAAGAAACCAAATCTGCTGGCGGTATTGTGCT
GCCTGGTTCCGCTGCCGAGAAGCCGTCCCGTGGTGAAGTTATCGCCGTTGGCAATGGCAAAATCACCGAAAATGGCGATG
TGCGTCCGCTGGACGTAAAAGCCGGTGATACGGTGATCTTCGGCCAATACTCCGGCAGCACCGTGAAGGTGGAAGGCGAA
GAGCTGCTGATCATGAGCGAAGCTGAAATTCTGGCCGTCGTCGAAGACTAA

Upstream 100 bases:

>100_bases
ATGATTAGCACTCCACTCATGAGAGTGCTAATTCTGACTATTGAGTCCGGCCATTGTGCCGACTCGGGTGTCGAAGAACT
AACTGGGAGTTTAAGGAAAA

Downstream 100 bases:

>100_bases
GTTGCGAAGGCCAAGGGTTGCAAGGCTCAGCGCTTAAGGCGAATAGCCAGGGTAACCCAGTTCCGCTCCAGACAGACATC
GAACGCCCGCAAGGGCATTC

Product: chaperonin, 10 kDa

Products: NA

Alternate protein names: GroES protein; Protein Cpn10

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGE
ELLIMSEAEILAVVED

Sequences:

>Translated_96_residues
MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGE
ELLIMSEAEILAVVED
>Mature_95_residues
SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGEE
LLIMSEAEILAVVED

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family

Homologues:

Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=67.7083333333333, Blast_Score=129, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=40.4255319148936, Blast_Score=69, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324594, Length=92, Percent_Identity=44.5652173913043, Blast_Score=74, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21356029, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): CH10_ALCBS (Q0VRW7)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_692353.1
- ProteinModelPortal:   Q0VRW7
- SMR:   Q0VRW7
- STRING:   Q0VRW7
- GeneID:   4212356
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_0633
- NMPDR:   fig|393595.12.peg.633
- eggNOG:   COG0234
- HOGENOM:   HBG703377
- OMA:   IILALSE
- PhylomeDB:   Q0VRW7
- BioCyc:   ABOR393595:ABO_0633-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00580
- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032
- Gene3D:   G3DSA:2.30.33.40
- PANTHER:   PTHR10772
- PRINTS:   PR00297
- SMART:   SM00883

Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like

EC number: NA

Molecular weight: Translated: 10218; Mature: 10086

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVK
CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEECCCCCEEEEEEC
AGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVED
CCCEEEEEECCCCEEEECCCEEEEEECCEEEEEEEC
>Mature Secondary Structure 
SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVK
CCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEECCCCCEEEEEEC
AGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVED
CCCEEEEEECCCCEEEECCCEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA