| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hisD [H]
Identifier: 110833423
GI number: 110833423
Start: 619215
End: 620516
Strand: Direct
Name: hisD [H]
Synonym: ABO_0562
Alternate gene names: 110833423
Gene position: 619215-620516 (Clockwise)
Preceding gene: 110833422
Following gene: 110833424
Centisome position: 19.85
GC content: 58.37
Gene sequence:
>1302_bases ATGGAAACCACCTGGCTTAACGCCCAAGATGCGGATTTCGATGCCAAGCTCGCCGCGCTAACCGCCTGGTCGGAAGAGCG TGACGAAGAGGTGGCGCATCGTGTGCGCGGCATCCTCAAGGGTGTGGCCCAGCGTGGCGACGTGGCACTGGTGGAGTACA CCAACCGCTTTGACCGTCGTGATGTGTCGGCCATGGATGAGCTGGTAGTGGATCAGGCTCAGTTGCAGGCCGCGCTGGCG CGTATTCCCGCTGAACAACGCGAAGCCCTGGAGGCGGCCGCTGATCGTGTGCGTCGCTACCATGAAAAGCAGAAACAGGA TTCCTGGCACTACCGGGAAGCGGACGGCACCTTGCTGGGCCAGCAGGTGACGCCTTTGGATCGGGCCGGTATTTATGTGC CCGGCGGTAAAGCCGCGTACCCCAGCTCAGTATTAATGAATGCGCTACCGGCAAAGGTGGCGGGTGTCGGCGAGATCATA ATGGTATCGCCTGCCCCAGAGGGCATCATCAATGACATGGTGCTGGCGGCGGCGGCTATTGCGGGTGTCGACAAGCTCTT TACTCTGGGCGGCGGGCAAGCGGTGGCCGCTTTGGCCTACGGTACAGAGACGGTGCCGGCGGTGGATAAAATTGTCGGCC CCGGCAATATCTATGTGGCCGAAGCCAAACGGCAGGTGTTTGGCAAAGTAGGCATCGACATGATTGCCGGCCCTTCGGAA ATTTTGGTGGTCTGTGACGGCAAGACCAACCCGGACTGGATTGCCATGGATCTGTTTTCTCAGGCTGAGCATGATGAGGA AGCTCAGGCCATTTTGGTGTCACCGGACGCCGATTTTTTGAAGCAGGTTGCGCAGTCCATGGAAACCTTGGCCGCGACTC TGGAGCGGGAAACCATTATTCGCACGTCCATGAAGCACCGGGGGGCGTTGATTCAGGTGAAGGATCTGGATCAGGCCATC GAAATCGCCAACCGCATTGCTTCTGAGCATCTGGAATTATCCATTGATGACGCGGAGCAATGGGCGAAAAAAGTTCGCCA TGCCGGTGCGATTTTTCTGGGTCGCCACACTCCCGAAGCGTTGGGTGATTACTGCGCCGGGCCGAACCACGTGCTGCCTA CGAGTGCCACCGCCCGCTTTTCTTCGCCATTGGGTGTGTACGATTTTCAGAAACGCAGTTCGCTGATTGGCTGCTCCCCG GAAGGGGCTAGCAGTCTTGCAAAAATTGCCTCTCCGCTTGCCCGTGGCGAAAGCCTCACGGCCCATGCCCGCAGTGCGGA ATATAGAATCAAGAAACGCTAA
Upstream 100 bases:
>100_bases TTTTGCTTATCTTTGCGATAGAAAAAGCGTCGCTTTTTTTCCGTGAACCCTGAGCCCTCTGTGGTAAAAATAGATTCTGA CTTTTAAAACGGTGCCAACC
Downstream 100 bases:
>100_bases CACGCCTCACGCATCACGTTTCCACGGGTGATGCGTGTTGCCTGATGCATGCAGGCGGAATACGTATGAGTAAATATTGG AGCGACTTCGTTCACCATTT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues METTWLNAQDADFDAKLAALTAWSEERDEEVAHRVRGILKGVAQRGDVALVEYTNRFDRRDVSAMDELVVDQAQLQAALA RIPAEQREALEAAADRVRRYHEKQKQDSWHYREADGTLLGQQVTPLDRAGIYVPGGKAAYPSSVLMNALPAKVAGVGEII MVSPAPEGIINDMVLAAAAIAGVDKLFTLGGGQAVAALAYGTETVPAVDKIVGPGNIYVAEAKRQVFGKVGIDMIAGPSE ILVVCDGKTNPDWIAMDLFSQAEHDEEAQAILVSPDADFLKQVAQSMETLAATLERETIIRTSMKHRGALIQVKDLDQAI EIANRIASEHLELSIDDAEQWAKKVRHAGAIFLGRHTPEALGDYCAGPNHVLPTSATARFSSPLGVYDFQKRSSLIGCSP EGASSLAKIASPLARGESLTAHARSAEYRIKKR
Sequences:
>Translated_433_residues METTWLNAQDADFDAKLAALTAWSEERDEEVAHRVRGILKGVAQRGDVALVEYTNRFDRRDVSAMDELVVDQAQLQAALA RIPAEQREALEAAADRVRRYHEKQKQDSWHYREADGTLLGQQVTPLDRAGIYVPGGKAAYPSSVLMNALPAKVAGVGEII MVSPAPEGIINDMVLAAAAIAGVDKLFTLGGGQAVAALAYGTETVPAVDKIVGPGNIYVAEAKRQVFGKVGIDMIAGPSE ILVVCDGKTNPDWIAMDLFSQAEHDEEAQAILVSPDADFLKQVAQSMETLAATLERETIIRTSMKHRGALIQVKDLDQAI EIANRIASEHLELSIDDAEQWAKKVRHAGAIFLGRHTPEALGDYCAGPNHVLPTSATARFSSPLGVYDFQKRSSLIGCSP EGASSLAKIASPLARGESLTAHARSAEYRIKKR >Mature_433_residues METTWLNAQDADFDAKLAALTAWSEERDEEVAHRVRGILKGVAQRGDVALVEYTNRFDRRDVSAMDELVVDQAQLQAALA RIPAEQREALEAAADRVRRYHEKQKQDSWHYREADGTLLGQQVTPLDRAGIYVPGGKAAYPSSVLMNALPAKVAGVGEII MVSPAPEGIINDMVLAAAAIAGVDKLFTLGGGQAVAALAYGTETVPAVDKIVGPGNIYVAEAKRQVFGKVGIDMIAGPSE ILVVCDGKTNPDWIAMDLFSQAEHDEEAQAILVSPDADFLKQVAQSMETLAATLERETIIRTSMKHRGALIQVKDLDQAI EIANRIASEHLELSIDDAEQWAKKVRHAGAIFLGRHTPEALGDYCAGPNHVLPTSATARFSSPLGVYDFQKRSSLIGCSP EGASSLAKIASPLARGESLTAHARSAEYRIKKR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=406, Percent_Identity=41.6256157635468, Blast_Score=304, Evalue=6e-84, Organism=Saccharomyces cerevisiae, GI6319819, Length=416, Percent_Identity=35.5769230769231, Blast_Score=255, Evalue=9e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46740; Mature: 46740
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTWLNAQDADFDAKLAALTAWSEERDEEVAHRVRGILKGVAQRGDVALVEYTNRFDRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCC DVSAMDELVVDQAQLQAALARIPAEQREALEAAADRVRRYHEKQKQDSWHYREADGTLLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEC QQVTPLDRAGIYVPGGKAAYPSSVLMNALPAKVAGVGEIIMVSPAPEGIINDMVLAAAAI CCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH AGVDKLFTLGGGQAVAALAYGTETVPAVDKIVGPGNIYVAEAKRQVFGKVGIDMIAGPSE HHHHHHHCCCCCCEEEHHHCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCEECCCCE ILVVCDGKTNPDWIAMDLFSQAEHDEEAQAILVSPDADFLKQVAQSMETLAATLERETII EEEEECCCCCCCEEHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RTSMKHRGALIQVKDLDQAIEIANRIASEHLELSIDDAEQWAKKVRHAGAIFLGRHTPEA HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEECCCHHH LGDYCAGPNHVLPTSATARFSSPLGVYDFQKRSSLIGCSPEGASSLAKIASPLARGESLT HHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCC AHARSAEYRIKKR HHHCCCCEEECCC >Mature Secondary Structure METTWLNAQDADFDAKLAALTAWSEERDEEVAHRVRGILKGVAQRGDVALVEYTNRFDRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCC DVSAMDELVVDQAQLQAALARIPAEQREALEAAADRVRRYHEKQKQDSWHYREADGTLLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEC QQVTPLDRAGIYVPGGKAAYPSSVLMNALPAKVAGVGEIIMVSPAPEGIINDMVLAAAAI CCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH AGVDKLFTLGGGQAVAALAYGTETVPAVDKIVGPGNIYVAEAKRQVFGKVGIDMIAGPSE HHHHHHHCCCCCCEEEHHHCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCEECCCCE ILVVCDGKTNPDWIAMDLFSQAEHDEEAQAILVSPDADFLKQVAQSMETLAATLERETII EEEEECCCCCCCEEHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RTSMKHRGALIQVKDLDQAIEIANRIASEHLELSIDDAEQWAKKVRHAGAIFLGRHTPEA HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEECCCHHH LGDYCAGPNHVLPTSATARFSSPLGVYDFQKRSSLIGCSPEGASSLAKIASPLARGESLT HHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCC AHARSAEYRIKKR HHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]