| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hisC-1 [H]
Identifier: 110833424
GI number: 110833424
Start: 620582
End: 621709
Strand: Direct
Name: hisC-1 [H]
Synonym: ABO_0563
Alternate gene names: 110833424
Gene position: 620582-621709 (Clockwise)
Preceding gene: 110833423
Following gene: 110833425
Centisome position: 19.89
GC content: 53.81
Gene sequence:
>1128_bases ATGAGTAAATATTGGAGCGACTTCGTTCACCATTTGGAGCCTTACGTTCCCGGCGAGCAGCCGAAGATGGACAAGTTAGT GAAGTTAAATACCAACGAGCACCCGCTGGGTCCGTCGCCGAAGGTAATCGAGGCGATTCGGGGCGAAGTGGACGATCGGC TGCGGCTGTATCCGGACCCGGATAGCAGCCAGCTGAAGCAGGCCATCGCCGACTATTATTCCGGCCTGGGCTATGGGATA AAGCGTTCTCAGGTGTTCGTTGGCAATGGCTCCGACGAAGTGCTGGCGCATTTGTTCATGGGCTTTTTCAAACAGCATCA GCCGCTACTTTTCCCAGATATCACCTATAGTTTCTACAAGGTCTATTGCGGCCTGTATCAAATCGACTATCAGCCTGTGC CGCTCGATGATGCTCTGGGTATTGCGGTGGACGATTATCTAGAAGGCGACAAGCCACGCGCAAATGGTGGCATCATCTTC CCTAACCCTAATGCGCCCACCGGTAAGCTGTTGCCGCTGAGTGAAATTGAGCGTTTGTTGCAGGCGAATACGCAAACCCT GGTGGTTATCGATGAGGCCTATATCGACTTTGCCGGCCCCCAAGGGCAGGGCGGCGCTACGGCCATCGCTTTGGTAAACC GCTACCCGAACCTGTTGGTGACTCAGACTTTGTCAAAATCCCGCTCTCTGGCGGGTTTGCGTATCGGCTTGGCGATTGGT GATGGCGCGCTGATTGATGGGCTAAATCGGATTAAAGACAGCTTCAATTCCTATCCGTTGGATCGTCTGGCCATTGCCGC TGGCGTGGCCGCGTTTAAAGATCAGGAGTGGTTCGAAAAAGGCTGTGAGCAAGTAATCATGCAGCGCGAGTGGCTCAACG AGCAGCTCGGGCAGCGAGGTTTTGAGAGCTTGCCGTCGGCGGCCAACTTTCTTTTCACTCGCCACGAGCAGCATAGTGGG CTCTCTCTGGCCCAGGGTTTGCGCGAGCAAGGCATTATTGTGCGTCATTTTGGCAAGCCTGAGCGTATCGCTGACTACCT GAGAATCACTATTGGCACGCCTGAGCAAAATCAGGCGTTGATTGTGGCTTTAGATGGGTTGATTTCAAAGTGGAAAAACG CCGGGTAA
Upstream 100 bases:
>100_bases CCCGCAGTGCGGAATATAGAATCAAGAAACGCTAACACGCCTCACGCATCACGTTTCCACGGGTGATGCGTGTTGCCTGA TGCATGCAGGCGGAATACGT
Downstream 100 bases:
>100_bases TTTTTTGCTGAAATTACATAAAGAGGCCGTGCCCAAACTTTGGGCGCGGCCTCTTTATGTAAAGGAGTAACATTGCAGCT TACTCGCTTTTGAGCTTTTA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSKYWSDFVHHLEPYVPGEQPKMDKLVKLNTNEHPLGPSPKVIEAIRGEVDDRLRLYPDPDSSQLKQAIADYYSGLGYGI KRSQVFVGNGSDEVLAHLFMGFFKQHQPLLFPDITYSFYKVYCGLYQIDYQPVPLDDALGIAVDDYLEGDKPRANGGIIF PNPNAPTGKLLPLSEIERLLQANTQTLVVIDEAYIDFAGPQGQGGATAIALVNRYPNLLVTQTLSKSRSLAGLRIGLAIG DGALIDGLNRIKDSFNSYPLDRLAIAAGVAAFKDQEWFEKGCEQVIMQREWLNEQLGQRGFESLPSAANFLFTRHEQHSG LSLAQGLREQGIIVRHFGKPERIADYLRITIGTPEQNQALIVALDGLISKWKNAG
Sequences:
>Translated_375_residues MSKYWSDFVHHLEPYVPGEQPKMDKLVKLNTNEHPLGPSPKVIEAIRGEVDDRLRLYPDPDSSQLKQAIADYYSGLGYGI KRSQVFVGNGSDEVLAHLFMGFFKQHQPLLFPDITYSFYKVYCGLYQIDYQPVPLDDALGIAVDDYLEGDKPRANGGIIF PNPNAPTGKLLPLSEIERLLQANTQTLVVIDEAYIDFAGPQGQGGATAIALVNRYPNLLVTQTLSKSRSLAGLRIGLAIG DGALIDGLNRIKDSFNSYPLDRLAIAAGVAAFKDQEWFEKGCEQVIMQREWLNEQLGQRGFESLPSAANFLFTRHEQHSG LSLAQGLREQGIIVRHFGKPERIADYLRITIGTPEQNQALIVALDGLISKWKNAG >Mature_374_residues SKYWSDFVHHLEPYVPGEQPKMDKLVKLNTNEHPLGPSPKVIEAIRGEVDDRLRLYPDPDSSQLKQAIADYYSGLGYGIK RSQVFVGNGSDEVLAHLFMGFFKQHQPLLFPDITYSFYKVYCGLYQIDYQPVPLDDALGIAVDDYLEGDKPRANGGIIFP NPNAPTGKLLPLSEIERLLQANTQTLVVIDEAYIDFAGPQGQGGATAIALVNRYPNLLVTQTLSKSRSLAGLRIGLAIGD GALIDGLNRIKDSFNSYPLDRLAIAAGVAAFKDQEWFEKGCEQVIMQREWLNEQLGQRGFESLPSAANFLFTRHEQHSGL SLAQGLREQGIIVRHFGKPERIADYLRITIGTPEQNQALIVALDGLISKWKNAG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=368, Percent_Identity=28.5326086956522, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1788722, Length=259, Percent_Identity=25.4826254826255, Blast_Score=65, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=390, Percent_Identity=28.974358974359, Blast_Score=114, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41629; Mature: 41498
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYWSDFVHHLEPYVPGEQPKMDKLVKLNTNEHPLGPSPKVIEAIRGEVDDRLRLYPDP CCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCC DSSQLKQAIADYYSGLGYGIKRSQVFVGNGSDEVLAHLFMGFFKQHQPLLFPDITYSFYK CHHHHHHHHHHHHHHCCCCCEECEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VYCGLYQIDYQPVPLDDALGIAVDDYLEGDKPRANGGIIFPNPNAPTGKLLPLSEIERLL HHHHHHEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH QANTQTLVVIDEAYIDFAGPQGQGGATAIALVNRYPNLLVTQTLSKSRSLAGLRIGLAIG HCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEHHHHHHCCCCCEEEEEEEEC DGALIDGLNRIKDSFNSYPLDRLAIAAGVAAFKDQEWFEKGCEQVIMQREWLNEQLGQRG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FESLPSAANFLFTRHEQHSGLSLAQGLREQGIIVRHFGKPERIADYLRITIGTPEQNQAL HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHEEEEECCCCCCCEE IVALDGLISKWKNAG EEEEHHHHHHHCCCC >Mature Secondary Structure SKYWSDFVHHLEPYVPGEQPKMDKLVKLNTNEHPLGPSPKVIEAIRGEVDDRLRLYPDP CHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCC DSSQLKQAIADYYSGLGYGIKRSQVFVGNGSDEVLAHLFMGFFKQHQPLLFPDITYSFYK CHHHHHHHHHHHHHHCCCCCEECEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VYCGLYQIDYQPVPLDDALGIAVDDYLEGDKPRANGGIIFPNPNAPTGKLLPLSEIERLL HHHHHHEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH QANTQTLVVIDEAYIDFAGPQGQGGATAIALVNRYPNLLVTQTLSKSRSLAGLRIGLAIG HCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEHHHHHHCCCCCEEEEEEEEC DGALIDGLNRIKDSFNSYPLDRLAIAAGVAAFKDQEWFEKGCEQVIMQREWLNEQLGQRG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FESLPSAANFLFTRHEQHSGLSLAQGLREQGIIVRHFGKPERIADYLRITIGTPEQNQAL HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHEEEEECCCCCCCEE IVALDGLISKWKNAG EEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA