| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110833399
Identifier: 110833399
GI number: 110833399
Start: 592730
End: 594328
Strand: Direct
Name: 110833399
Synonym: ABO_0538
Alternate gene names: NA
Gene position: 592730-594328 (Clockwise)
Preceding gene: 110833398
Following gene: 110833401
Centisome position: 19.0
GC content: 54.53
Gene sequence:
>1599_bases TTGCTCGCCTGTTATGCACTCACCTGCGTCGTACATCGTCCCAGCTGGCACAATTTAAACTGCCGGTGGGTTAATGAAGA GCCGTTGCTTATGAGAACGCTTTGTCTGTTTGTGTGGCTAATGTTGCTGGCGGCCTGTGATCCGGGACAGTTACCTGCGG ATGTGCGGCTGCCCGATGGCGCTGTGTATGAAGGTGATGTAAAGAGCAATTTGTTTCACGGTGAGGGCACTCTGACTTGG CCCGGTGGCCGGCGTTATAAGGGGGAGTTTCAGGACGGGCTAATGACCGGCGAGGGTCGGTTGGAGGAACGCGACGGTTG TGTTCAGGAGGGCCAGTTCGTTAATGGTGTTCTTAATGGCGAAGGCGCTTACACCTGCCAAGATGCTTCTTGGCAGGGAG AGTTCAAAGATGGCGAACTGATTAAAGGCTCAGTGGAATATCTGGATGATAATTCCTACCAGGGTGAATTTCGCGATTTT CAACCCCATGGGCAGGGGCTGTGGGTTACTGCATCCGGGGAGCAGTTTGAAGGGACATTCGCCGATGGCTACATGGTCAA AGGTTCCTACCGCAACGATGAAGGCTATCATTATCAGGGTGAATTTGATTTTTTTACCTTCGAGGGAAAAGGTGTTTTGA CCCGCCCGGACGGCGCCGTGATTCGGGCCGATTTTGAAAAGGGCAAAGCGCAAGGCCCTGGCACCCGCACTCGTTTCGAT GATGGAGGAACGGCGGTGGTGGAAAAGGGTTTTTTTGTGCGAGGTGACTATTACCCTAGCGAAAAGGCCTGGCGTCAGCG TAAGCAGCGGCAGGCGGCAGCCATGGAAGCGAGGCTGTACACGGAATCAAGCCGTTTGCAGTCGGTGTTGTCGTCACTGG CGCCCCAGCGGCCGGGCGTGCGTGATGTCTATTTATTGGTGGTGGGCGGAGATGGCACTGAAGCGGTGTTTGCCCGTGAA GTGGATTGGGTCGCACAACGGCTGGACTCTGTGTTTAATTTGAAGCGGCGGCACGTGCGTTTGATTAATGGGGGCAGTGA TGATTTGCCCTTGGCCACCCGAACTAGTATCCAGGAAAGCCTTAAAGCGCTGGATGCCTTGATGGACCCAAATGAAGATC TGTTACTGATGCATGTTGTTAGCCACGGATCGCCCAACGGGGATTTGGTACTGGATGATAAGAGCCTCAAGCTCAATAAT CTTTCTGTTGCTGATGGTAAGGCGTGGCTGGATGAGCTTGCTGCTCGTCATCAATGGCTGGTGGTGTCGGCCTGTTACTC GGGTAAATGGGTGGAAAGCTTGGCTTCACCGGAGCGAGTGGTGTTTTCCTCTGCTGCGGCGGACCGTACCTCGTTTGGTT GTGGTGATGATTCCGAGCGAACTTGGTTCAGTAAGGCGCTGTATGGCGAAGCAATGCTGGCCGGGGTCCAAGACCCCGAC GCCTGGTTTGAGGCGGCTGAAGAAAATGTCTCGCTCATGGAAAAGGAGCGGGGCACCGAAGATGACGACCTATCCTTGCC CCAGAAATCCGTCGGCGGGAACTTCTTGCAATGGTGGCAGGCGGATAAAACTGCAGTGGTGATTCCGGTAAGGCCCTGA
Upstream 100 bases:
>100_bases CGTGCCGCAGAAGACGCTACTTTGATTGTGTTGACCCGCAAAGGGATTGAACAGTTACGCAAACGCAGCCCTCATGCGGT GAGCTTGGTGATGGAAAATA
Downstream 100 bases:
>100_bases CTCCACTTGCAAGTCTACTCGTGGAGTCAGTACAGCGGTGCGGTTTTATCCAGCTGGTTGAGGTAATTGATCAGTTTGCG GCGTTCGCGTTTGAATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Morn Repeat Protein; Peptidase; MORN Repeat Family Protein; MORN Domain-Containing Protein; Morn Repeat-Containing Protein; Phosphatidylinositol-4-Phosphate 5-Kinase; Cytoplasmic Protein; MORN Motif-Containing Protein; PEGA Domain-Containing Protein; MorN Domain-Containing Protein; Morn Motif-Containing Protein
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MLACYALTCVVHRPSWHNLNCRWVNEEPLLMRTLCLFVWLMLLAACDPGQLPADVRLPDGAVYEGDVKSNLFHGEGTLTW PGGRRYKGEFQDGLMTGEGRLEERDGCVQEGQFVNGVLNGEGAYTCQDASWQGEFKDGELIKGSVEYLDDNSYQGEFRDF QPHGQGLWVTASGEQFEGTFADGYMVKGSYRNDEGYHYQGEFDFFTFEGKGVLTRPDGAVIRADFEKGKAQGPGTRTRFD DGGTAVVEKGFFVRGDYYPSEKAWRQRKQRQAAAMEARLYTESSRLQSVLSSLAPQRPGVRDVYLLVVGGDGTEAVFARE VDWVAQRLDSVFNLKRRHVRLINGGSDDLPLATRTSIQESLKALDALMDPNEDLLLMHVVSHGSPNGDLVLDDKSLKLNN LSVADGKAWLDELAARHQWLVVSACYSGKWVESLASPERVVFSSAAADRTSFGCGDDSERTWFSKALYGEAMLAGVQDPD AWFEAAEENVSLMEKERGTEDDDLSLPQKSVGGNFLQWWQADKTAVVIPVRP
Sequences:
>Translated_532_residues MLACYALTCVVHRPSWHNLNCRWVNEEPLLMRTLCLFVWLMLLAACDPGQLPADVRLPDGAVYEGDVKSNLFHGEGTLTW PGGRRYKGEFQDGLMTGEGRLEERDGCVQEGQFVNGVLNGEGAYTCQDASWQGEFKDGELIKGSVEYLDDNSYQGEFRDF QPHGQGLWVTASGEQFEGTFADGYMVKGSYRNDEGYHYQGEFDFFTFEGKGVLTRPDGAVIRADFEKGKAQGPGTRTRFD DGGTAVVEKGFFVRGDYYPSEKAWRQRKQRQAAAMEARLYTESSRLQSVLSSLAPQRPGVRDVYLLVVGGDGTEAVFARE VDWVAQRLDSVFNLKRRHVRLINGGSDDLPLATRTSIQESLKALDALMDPNEDLLLMHVVSHGSPNGDLVLDDKSLKLNN LSVADGKAWLDELAARHQWLVVSACYSGKWVESLASPERVVFSSAAADRTSFGCGDDSERTWFSKALYGEAMLAGVQDPD AWFEAAEENVSLMEKERGTEDDDLSLPQKSVGGNFLQWWQADKTAVVIPVRP >Mature_532_residues MLACYALTCVVHRPSWHNLNCRWVNEEPLLMRTLCLFVWLMLLAACDPGQLPADVRLPDGAVYEGDVKSNLFHGEGTLTW PGGRRYKGEFQDGLMTGEGRLEERDGCVQEGQFVNGVLNGEGAYTCQDASWQGEFKDGELIKGSVEYLDDNSYQGEFRDF QPHGQGLWVTASGEQFEGTFADGYMVKGSYRNDEGYHYQGEFDFFTFEGKGVLTRPDGAVIRADFEKGKAQGPGTRTRFD DGGTAVVEKGFFVRGDYYPSEKAWRQRKQRQAAAMEARLYTESSRLQSVLSSLAPQRPGVRDVYLLVVGGDGTEAVFARE VDWVAQRLDSVFNLKRRHVRLINGGSDDLPLATRTSIQESLKALDALMDPNEDLLLMHVVSHGSPNGDLVLDDKSLKLNN LSVADGKAWLDELAARHQWLVVSACYSGKWVESLASPERVVFSSAAADRTSFGCGDDSERTWFSKALYGEAMLAGVQDPD AWFEAAEENVSLMEKERGTEDDDLSLPQKSVGGNFLQWWQADKTAVVIPVRP
Specific function: Unknown
COG id: COG4642
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI21358361, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59161; Mature: 59161
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLACYALTCVVHRPSWHNLNCRWVNEEPLLMRTLCLFVWLMLLAACDPGQLPADVRLPDG CEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC AVYEGDVKSNLFHGEGTLTWPGGRRYKGEFQDGLMTGEGRLEERDGCVQEGQFVNGVLNG CEEECCCCCCEEECCCEEECCCCCCCCCCCCCCEECCCCCCCHHCCCHHCCCEEEEEECC EGAYTCQDASWQGEFKDGELIKGSVEYLDDNSYQGEFRDFQPHGQGLWVTASGEQFEGTF CCCEEECCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE ADGYMVKGSYRNDEGYHYQGEFDFFTFEGKGVLTRPDGAVIRADFEKGKAQGPGTRTRFD CCCEEEECCCCCCCCEEECCCEEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCEEC DGGTAVVEKGFFVRGDYYPSEKAWRQRKQRQAAAMEARLYTESSRLQSVLSSLAPQRPGV CCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC RDVYLLVVGGDGTEAVFAREVDWVAQRLDSVFNLKRRHVRLINGGSDDLPLATRTSIQES CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHH LKALDALMDPNEDLLLMHVVSHGSPNGDLVLDDKSLKLNNLSVADGKAWLDELAARHQWL HHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCEEECCEEECCCHHHHHHHHHCCCEE VVSACYSGKWVESLASPERVVFSSAAADRTSFGCGDDSERTWFSKALYGEAMLAGVQDPD EEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHH AWFEAAEENVSLMEKERGTEDDDLSLPQKSVGGNFLQWWQADKTAVVIPVRP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEHCCCCCEEEEEEECC >Mature Secondary Structure MLACYALTCVVHRPSWHNLNCRWVNEEPLLMRTLCLFVWLMLLAACDPGQLPADVRLPDG CEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC AVYEGDVKSNLFHGEGTLTWPGGRRYKGEFQDGLMTGEGRLEERDGCVQEGQFVNGVLNG CEEECCCCCCEEECCCEEECCCCCCCCCCCCCCEECCCCCCCHHCCCHHCCCEEEEEECC EGAYTCQDASWQGEFKDGELIKGSVEYLDDNSYQGEFRDFQPHGQGLWVTASGEQFEGTF CCCEEECCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE ADGYMVKGSYRNDEGYHYQGEFDFFTFEGKGVLTRPDGAVIRADFEKGKAQGPGTRTRFD CCCEEEECCCCCCCCEEECCCEEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCEEC DGGTAVVEKGFFVRGDYYPSEKAWRQRKQRQAAAMEARLYTESSRLQSVLSSLAPQRPGV CCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC RDVYLLVVGGDGTEAVFAREVDWVAQRLDSVFNLKRRHVRLINGGSDDLPLATRTSIQES CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHH LKALDALMDPNEDLLLMHVVSHGSPNGDLVLDDKSLKLNNLSVADGKAWLDELAARHQWL HHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCEEECCEEECCCHHHHHHHHHCCCEE VVSACYSGKWVESLASPERVVFSSAAADRTSFGCGDDSERTWFSKALYGEAMLAGVQDPD EEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHH AWFEAAEENVSLMEKERGTEDDDLSLPQKSVGGNFLQWWQADKTAVVIPVRP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA