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The map label for this gene is ydhP [H]

Identifier: 110635380

GI number: 110635380

Start: 3325732

End: 3326946

Strand: Reverse

Name: ydhP [H]

Synonym: Meso_3051

Alternate gene names: 110635380

Gene position: 3326946-3325732 (Counterclockwise)

Preceding gene: 110635381

Following gene: 110635375

Centisome position: 75.4

GC content: 64.53

Gene sequence:

>1215_bases
ATGAACGCCAATGTCTCGACGGCCGGAACGACGGCCGAAGCATCCTCGTCCCCCCGCTGGGCGCTTCTCGCTCTTGCGAT
CGGCGCTTTCGGTATCGGCACGACCGAGTTCTCGCCGATGGGGCTTCTGCCCGTCATCGCGCAGGGGGTCGATGTTTCGA
TCCCGACGGCGGGGCTCCTCATCAGCGCCTATGCGATCGGCGTGATGATTGGCGCGCCGATCATGACGCTCGCCTTCAGC
CGTTTCGGCAAGCGTACGGCGTTGATCCTTCGGATGGTTATCTTCACCATCGGCAATCTGATGTCGGCCATGGCTCCGGG
CTACTTTACGCTGCTCGCTGCCCGTCTCGTCACCAGCCTCAATCACGGCGCCTTCTTCGGCCTGGGCGCGGTGGTGGCGG
CAAGCGTGGTGCCGAAAGAAAAACAGGCAAGCGCCGTGGCCGCCATGTTCATGGGCCTGACTATCGCCAATATCGGCGGT
GTGCCGGCAGCGACCTGGGTTGGCCAGCAGATCGGCTGGCGCATGGCCTTCGCCGGAACGGCACTTATCGGTATCGCAGC
CATCGCGGCGCTTTGGACCGCTCTTCCAAAGGGCGTGCGCGGCTCGATGCCGGATCTGAAGCGCGAGATGGGCGTGCTTA
CTCGACCCACGGTGCTGCTTGCGATGGCGACCACCGTCATGGGGGCGGGGGCGATGTTCACGCTTTACACTTATGTCGCG
CCTACCCTTGAGACCCTCACCGGCGCGTCCGACCGTTTCGTCACCATTGGGCTCGCGTTGATCGGCATCGGCTTTACCAT
CGGCAATTGGCTGGGCGGGCGGCTGGCCGACTGGTCGCTCGATGGCGCGACCAAAATATTCCTCGGTGCGCTCGCCGTGA
TCATGCTCGTCCTTCCGCTGGCCTTTGGCACTCATGCGGGGGCGGCCATCGGTCTCCTTGTCTGGGGCGCTGCGGCATTC
GCCATCGTCCCGCCGGTGCAGATGCGGGTGATGCAAGCCGCATCGGAAGCGCCGGGCCTGGCCTCCTCCATCAATGTCGG
AGCCTTCAACCTTGGCAACGCGCTGGGAGCGGCCATCGGCGCTGGAGTTATCAGCCTCGATCTTGGCTATGCGGCGGTCT
CCATCGCTGGCGGCCTGCTCGCCTCCGCGGGTCTTGGCATGGTGCTCATCGGCGGCCGCGAGAAATCCCCACGACTCAAG
ATGTGTGGAGCCTAA

Upstream 100 bases:

>100_bases
AACCGATATGGCCGCCATCGCCAAGCTTGCCCGCCCCGACGGGCGGCTCGTCAGCCCTCCCGGCCTTGCTCCTGATTGGG
ACGCCTAAGGAGCTTCAATC

Downstream 100 bases:

>100_bases
AGCGGGGTTGGGTGGGCTTGGTCTGGAAAGCCTGCGTCCATAGCGGCCGATCCAAACGCAAAACACGCCCCGCCCAGCCT
TTCGGCAAGCGGGGCGTGCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNANVSTAGTTAEASSSPRWALLALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLLISAYAIGVMIGAPIMTLAFS
RFGKRTALILRMVIFTIGNLMSAMAPGYFTLLAARLVTSLNHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGG
VPAATWVGQQIGWRMAFAGTALIGIAAIAALWTALPKGVRGSMPDLKREMGVLTRPTVLLAMATTVMGAGAMFTLYTYVA
PTLETLTGASDRFVTIGLALIGIGFTIGNWLGGRLADWSLDGATKIFLGALAVIMLVLPLAFGTHAGAAIGLLVWGAAAF
AIVPPVQMRVMQAASEAPGLASSINVGAFNLGNALGAAIGAGVISLDLGYAAVSIAGGLLASAGLGMVLIGGREKSPRLK
MCGA

Sequences:

>Translated_404_residues
MNANVSTAGTTAEASSSPRWALLALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLLISAYAIGVMIGAPIMTLAFS
RFGKRTALILRMVIFTIGNLMSAMAPGYFTLLAARLVTSLNHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGG
VPAATWVGQQIGWRMAFAGTALIGIAAIAALWTALPKGVRGSMPDLKREMGVLTRPTVLLAMATTVMGAGAMFTLYTYVA
PTLETLTGASDRFVTIGLALIGIGFTIGNWLGGRLADWSLDGATKIFLGALAVIMLVLPLAFGTHAGAAIGLLVWGAAAF
AIVPPVQMRVMQAASEAPGLASSINVGAFNLGNALGAAIGAGVISLDLGYAAVSIAGGLLASAGLGMVLIGGREKSPRLK
MCGA
>Mature_404_residues
MNANVSTAGTTAEASSSPRWALLALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLLISAYAIGVMIGAPIMTLAFS
RFGKRTALILRMVIFTIGNLMSAMAPGYFTLLAARLVTSLNHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGG
VPAATWVGQQIGWRMAFAGTALIGIAAIAALWTALPKGVRGSMPDLKREMGVLTRPTVLLAMATTVMGAGAMFTLYTYVA
PTLETLTGASDRFVTIGLALIGIGFTIGNWLGGRLADWSLDGATKIFLGALAVIMLVLPLAFGTHAGAAIGLLVWGAAAF
AIVPPVQMRVMQAASEAPGLASSINVGAFNLGNALGAAIGAGVISLDLGYAAVSIAGGLLASAGLGMVLIGGREKSPRLK
MCGA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=377, Percent_Identity=63.9257294429708, Blast_Score=451, Evalue=1e-128,
Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=34.2036553524804, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI145693198, Length=356, Percent_Identity=28.3707865168539, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787808, Length=381, Percent_Identity=28.8713910761155, Blast_Score=105, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40753; Mature: 40753

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANVSTAGTTAEASSSPRWALLALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH
ISAYAIGVMIGAPIMTLAFSRFGKRTALILRMVIFTIGNLMSAMAPGYFTLLAARLVTSL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
NHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGGVPAATWVGQQIGWRMAFAGT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
ALIGIAAIAALWTALPKGVRGSMPDLKREMGVLTRPTVLLAMATTVMGAGAMFTLYTYVA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
PTLETLTGASDRFVTIGLALIGIGFTIGNWLGGRLADWSLDGATKIFLGALAVIMLVLPL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFGTHAGAAIGLLVWGAAAFAIVPPVQMRVMQAASEAPGLASSINVGAFNLGNALGAAIG
HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH
AGVISLDLGYAAVSIAGGLLASAGLGMVLIGGREKSPRLKMCGA
CCHHEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNANVSTAGTTAEASSSPRWALLALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHH
ISAYAIGVMIGAPIMTLAFSRFGKRTALILRMVIFTIGNLMSAMAPGYFTLLAARLVTSL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
NHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGGVPAATWVGQQIGWRMAFAGT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
ALIGIAAIAALWTALPKGVRGSMPDLKREMGVLTRPTVLLAMATTVMGAGAMFTLYTYVA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
PTLETLTGASDRFVTIGLALIGIGFTIGNWLGGRLADWSLDGATKIFLGALAVIMLVLPL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFGTHAGAAIGLLVWGAAAFAIVPPVQMRVMQAASEAPGLASSINVGAFNLGNALGAAIG
HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH
AGVISLDLGYAAVSIAGGLLASAGLGMVLIGGREKSPRLKMCGA
CCHHEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]