| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is ptsP [H]
Identifier: 110635329
GI number: 110635329
Start: 3267878
End: 3270148
Strand: Reverse
Name: ptsP [H]
Synonym: Meso_3000
Alternate gene names: 110635329
Gene position: 3270148-3267878 (Counterclockwise)
Preceding gene: 110635330
Following gene: 110635328
Centisome position: 74.11
GC content: 63.94
Gene sequence:
>2271_bases ATGCGCGACATTGGCGGCGGCCCGCGTGTACTCTTAAAGCGGCTGCGTGAACTGATGGCAGAGCCGGTCGAGCCGCAGCA GCGGCTCGACCGGATCGTGCGCGAGATCGCCCAGAACATGGTCGCGGAGGTCTGCTCGCTCTATGTGCTGCGCGCCGATT CCGTGCTCGAGCTATATGCGACGGAGGGCCTCAATCCGACCGCGGTGCACCTGGCGCAGTTGCGCCTCGGGCAAGGCCTC GTCGGCACGATCGCAGCGAGCGCGCGGCCGCTCAACCTTTCCGATGCGCAGAAACATCCGGCTTTTGCCTATCTGCCGGA GACCGGAGAAGAGATCTACCATTCCTTTCTCGGCGTGCCGGTTTTAAGGGCGGGCCGTACGCTTGGCGTGCTGGTCGTCC AGAACCGCACCATGCGGCACTACCGCGAGGACGAGGTGGAAGCGCTGGAAACGGTCGCCATGGTGGTGGCCGAGATGATC GCCACGGGCGATCTTGCGCGTCTGACCCGGCCGGGCATCGAGCTCGATCTCAGGCGTGCTGCCAGCTTCAAGGGGCTGCC GCTCAATGACGGCGTAGGGCTCGGCCATGTCGTGCTGCACGAGCCGCGCATCGTCGTCACCAATCTCTTCAACGAAGACA GCGATCGCGAGCGGGAGCGCCTTGAGGAGGCGCTTTCCTCGCTCAGGCTTTCAATCGACGACATGCTTTCCCGGCGCGAT GTGGCCTTCGAGGGCGAGCACCGGGCGGTGCTGGAAGCTTATCGCATGTTTGCCAATGACCGGGGCTGGGTGCGGCGGCT GGAGGAGGCAGTCAGCAACGGGCTTACCGCCGAGGCCGCTGTCGAAAAAGTGCAGAGCGACATGCGCGCGCGGATGCTGC ACATGACCGATCCTTATCTTCGCGAGCGCATGAGCGATTTCGACGATCTGGCAAACCGGCTTTTGCGCCAGCTCCTGGGC CGTGGGCCGGAGGCGCTCGCCGACATCGTGCCGAAGGATGCGATCATCGTCGCCCGCTCCATGGGGGCGGCCGAACTGCT CGACTATCCGCGCGAGCGGCTGCGGGGCCTGGTGCTGGAGGATGGCGCTCCGACCAGCCATATCGTGATCGTCGCGCGCG CGATCGGCCTTCCGACGGTGGGGCAGGTGAAGGGCGCAGTCGCGATGTCGGAAAACGGCGATGCGATCGTTGTCGATGGT GAGGACGGGCAGGTTCATCTGCGCCCGCAGGCCGATGTCGAAACGGCCTATGCGGAGAAGGTGCGTTTCCGCGCAAGACG GCAGCAGCATTATCGGGAACTGCGCGACCGTCCTGCGGTCACCAAGGACGGTGTGCCGGTCCAGCTCCTGATGAATGCCG GGCTGGCGGTCGATTTGCCCCAACTGGCGCAATCGGGAGCAGAAGGGATTGGCCTGTTTCGCACCGAGCTTCAATTCATG GTGGTCTCCACCTTCCCGCGCGTCGAGGCGCAGGAGGGGCTTTACCGCGAGGTTCTGGACGCAGCGGGTGAAAAGCCGGT TACGTTCCGCACCATCGATATCGGCGGCGACAAGGTGCTCCCCTACTTCAAGGGTGCGCAGCAGGAGGAAAATCCCGCCC TGGGTTGGCGCGCGATCCGGTTGACGCTCGACAGGCCAGGGCTGTTACGCACGCAGATCCGCGCACTCCTGAAGGCGGCC GGCGGGCGCGAGCTTAAGCTTATGCTGCCAATGGTGACGGAAATCGACGAGGTGCGGCAGGCTCGCGCCATCATCGACCG GGAGGTCCGGCACTTATCGCGGTTCGCCCATCTTCTGCCGACCAGCTTGAAGCTTGGCGCGATGATCGAGGTGCCGGCGC TCCTCTGGCAACTCGAAGAGCTGATGCAAGCGGTGGATTTCGTGTCGGTAGGATCGAACGATCTTTTTCAGTTCATCACC GCCGCGGACCGGGGGAATACGCTGATTTCCAACCGTTTCGATCCGCTTGGCGTGCCGTTCCTCAGGGTGCTGAAGCAGAT CGCGGCGGCAGGGCAGGCGACGCACACGCCGGTGACACTCTGCGGAGAGCTCGCCGGCAAACCAATCTCCGCCATGGCGC TGCTCGGCATCGGCTATCGGTCCATTTCGATGAATTCCGCTTCCATCGGCCCGGTGAAGGCCATGCTTTGCGAACTGCCG CTGCAGAAGCTCAGCGAACGGCTTGAAGCAGCCCTTGCCAATCGCAGCGGGAAGATCGATATCCGGGCCGAGCTGCAGCA GTTTGCCAGCGAATACGACATTCCTCTTTAG
Upstream 100 bases:
>100_bases TTCCGTCTACGGTCTGGATAAGCATTAGGACAGTTTTCTTTAACCATGCTTTGCGCGCTGCCAGATGGGCCAGCGCCCGC GAAGCTTTGGAGGAAGTCCG
Downstream 100 bases:
>100_bases ATAGAACAAGGGAAATATGGCCGAGCTGCCGCGCGAACGGATGGACCAGGTTTTGAAGCGTTTCGAGCTGATCGAAACGC AGATGGCGGCCGGCCCTTCG
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MRDIGGGPRVLLKRLRELMAEPVEPQQRLDRIVREIAQNMVAEVCSLYVLRADSVLELYATEGLNPTAVHLAQLRLGQGL VGTIAASARPLNLSDAQKHPAFAYLPETGEEIYHSFLGVPVLRAGRTLGVLVVQNRTMRHYREDEVEALETVAMVVAEMI ATGDLARLTRPGIELDLRRAASFKGLPLNDGVGLGHVVLHEPRIVVTNLFNEDSDRERERLEEALSSLRLSIDDMLSRRD VAFEGEHRAVLEAYRMFANDRGWVRRLEEAVSNGLTAEAAVEKVQSDMRARMLHMTDPYLRERMSDFDDLANRLLRQLLG RGPEALADIVPKDAIIVARSMGAAELLDYPRERLRGLVLEDGAPTSHIVIVARAIGLPTVGQVKGAVAMSENGDAIVVDG EDGQVHLRPQADVETAYAEKVRFRARRQQHYRELRDRPAVTKDGVPVQLLMNAGLAVDLPQLAQSGAEGIGLFRTELQFM VVSTFPRVEAQEGLYREVLDAAGEKPVTFRTIDIGGDKVLPYFKGAQQEENPALGWRAIRLTLDRPGLLRTQIRALLKAA GGRELKLMLPMVTEIDEVRQARAIIDREVRHLSRFAHLLPTSLKLGAMIEVPALLWQLEELMQAVDFVSVGSNDLFQFIT AADRGNTLISNRFDPLGVPFLRVLKQIAAAGQATHTPVTLCGELAGKPISAMALLGIGYRSISMNSASIGPVKAMLCELP LQKLSERLEAALANRSGKIDIRAELQQFASEYDIPL
Sequences:
>Translated_756_residues MRDIGGGPRVLLKRLRELMAEPVEPQQRLDRIVREIAQNMVAEVCSLYVLRADSVLELYATEGLNPTAVHLAQLRLGQGL VGTIAASARPLNLSDAQKHPAFAYLPETGEEIYHSFLGVPVLRAGRTLGVLVVQNRTMRHYREDEVEALETVAMVVAEMI ATGDLARLTRPGIELDLRRAASFKGLPLNDGVGLGHVVLHEPRIVVTNLFNEDSDRERERLEEALSSLRLSIDDMLSRRD VAFEGEHRAVLEAYRMFANDRGWVRRLEEAVSNGLTAEAAVEKVQSDMRARMLHMTDPYLRERMSDFDDLANRLLRQLLG RGPEALADIVPKDAIIVARSMGAAELLDYPRERLRGLVLEDGAPTSHIVIVARAIGLPTVGQVKGAVAMSENGDAIVVDG EDGQVHLRPQADVETAYAEKVRFRARRQQHYRELRDRPAVTKDGVPVQLLMNAGLAVDLPQLAQSGAEGIGLFRTELQFM VVSTFPRVEAQEGLYREVLDAAGEKPVTFRTIDIGGDKVLPYFKGAQQEENPALGWRAIRLTLDRPGLLRTQIRALLKAA GGRELKLMLPMVTEIDEVRQARAIIDREVRHLSRFAHLLPTSLKLGAMIEVPALLWQLEELMQAVDFVSVGSNDLFQFIT AADRGNTLISNRFDPLGVPFLRVLKQIAAAGQATHTPVTLCGELAGKPISAMALLGIGYRSISMNSASIGPVKAMLCELP LQKLSERLEAALANRSGKIDIRAELQQFASEYDIPL >Mature_756_residues MRDIGGGPRVLLKRLRELMAEPVEPQQRLDRIVREIAQNMVAEVCSLYVLRADSVLELYATEGLNPTAVHLAQLRLGQGL VGTIAASARPLNLSDAQKHPAFAYLPETGEEIYHSFLGVPVLRAGRTLGVLVVQNRTMRHYREDEVEALETVAMVVAEMI ATGDLARLTRPGIELDLRRAASFKGLPLNDGVGLGHVVLHEPRIVVTNLFNEDSDRERERLEEALSSLRLSIDDMLSRRD VAFEGEHRAVLEAYRMFANDRGWVRRLEEAVSNGLTAEAAVEKVQSDMRARMLHMTDPYLRERMSDFDDLANRLLRQLLG RGPEALADIVPKDAIIVARSMGAAELLDYPRERLRGLVLEDGAPTSHIVIVARAIGLPTVGQVKGAVAMSENGDAIVVDG EDGQVHLRPQADVETAYAEKVRFRARRQQHYRELRDRPAVTKDGVPVQLLMNAGLAVDLPQLAQSGAEGIGLFRTELQFM VVSTFPRVEAQEGLYREVLDAAGEKPVTFRTIDIGGDKVLPYFKGAQQEENPALGWRAIRLTLDRPGLLRTQIRALLKAA GGRELKLMLPMVTEIDEVRQARAIIDREVRHLSRFAHLLPTSLKLGAMIEVPALLWQLEELMQAVDFVSVGSNDLFQFIT AADRGNTLISNRFDPLGVPFLRVLKQIAAAGQATHTPVTLCGELAGKPISAMALLGIGYRSISMNSASIGPVKAMLCELP LQKLSERLEAALANRSGKIDIRAELQQFASEYDIPL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=738, Percent_Identity=35.9078590785908, Blast_Score=392, Evalue=1e-110, Organism=Escherichia coli, GI1788756, Length=558, Percent_Identity=32.4372759856631, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI1788726, Length=573, Percent_Identity=32.8097731239092, Blast_Score=268, Evalue=1e-72, Organism=Escherichia coli, GI48994992, Length=544, Percent_Identity=29.9632352941176, Blast_Score=242, Evalue=5e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 83512; Mature: 83512
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDIGGGPRVLLKRLRELMAEPVEPQQRLDRIVREIAQNMVAEVCSLYVLRADSVLELYA CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TEGLNPTAVHLAQLRLGQGLVGTIAASARPLNLSDAQKHPAFAYLPETGEEIYHSFLGVP HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCH VLRAGRTLGVLVVQNRTMRHYREDEVEALETVAMVVAEMIATGDLARLTRPGIELDLRRA HHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEHHHH ASFKGLPLNDGVGLGHVVLHEPRIVVTNLFNEDSDRERERLEEALSSLRLSIDDMLSRRD CCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCC VAFEGEHRAVLEAYRMFANDRGWVRRLEEAVSNGLTAEAAVEKVQSDMRARMLHMTDPYL CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH RERMSDFDDLANRLLRQLLGRGPEALADIVPKDAIIVARSMGAAELLDYPRERLRGLVLE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCEEEE DGAPTSHIVIVARAIGLPTVGQVKGAVAMSENGDAIVVDGEDGQVHLRPQADVETAYAEK CCCCCCCEEEEEHHHCCCCCHHCCCCEEECCCCCEEEEECCCCEEEECCCCCHHHHHHHH VRFRARRQQHYRELRDRPAVTKDGVPVQLLMNAGLAVDLPQLAQSGAEGIGLFRTELQFM HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEECHHHHHCCCCCCHHHHHHHHHH VVSTFPRVEAQEGLYREVLDAAGEKPVTFRTIDIGGDKVLPYFKGAQQEENPALGWRAIR HHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCHHCCCCCCCCCCCCEEEEE LTLDRPGLLRTQIRALLKAAGGRELKLMLPMVTEIDEVRQARAIIDREVRHLSRFAHLLP EEECCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSLKLGAMIEVPALLWQLEELMQAVDFVSVGSNDLFQFITAADRGNTLISNRFDPLGVPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHH LRVLKQIAAAGQATHTPVTLCGELAGKPISAMALLGIGYRSISMNSASIGPVKAMLCELP HHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH LQKLSERLEAALANRSGKIDIRAELQQFASEYDIPL HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MRDIGGGPRVLLKRLRELMAEPVEPQQRLDRIVREIAQNMVAEVCSLYVLRADSVLELYA CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TEGLNPTAVHLAQLRLGQGLVGTIAASARPLNLSDAQKHPAFAYLPETGEEIYHSFLGVP HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCH VLRAGRTLGVLVVQNRTMRHYREDEVEALETVAMVVAEMIATGDLARLTRPGIELDLRRA HHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEHHHH ASFKGLPLNDGVGLGHVVLHEPRIVVTNLFNEDSDRERERLEEALSSLRLSIDDMLSRRD CCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCC VAFEGEHRAVLEAYRMFANDRGWVRRLEEAVSNGLTAEAAVEKVQSDMRARMLHMTDPYL CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH RERMSDFDDLANRLLRQLLGRGPEALADIVPKDAIIVARSMGAAELLDYPRERLRGLVLE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCEEEE DGAPTSHIVIVARAIGLPTVGQVKGAVAMSENGDAIVVDGEDGQVHLRPQADVETAYAEK CCCCCCCEEEEEHHHCCCCCHHCCCCEEECCCCCEEEEECCCCEEEECCCCCHHHHHHHH VRFRARRQQHYRELRDRPAVTKDGVPVQLLMNAGLAVDLPQLAQSGAEGIGLFRTELQFM HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEECHHHHHCCCCCCHHHHHHHHHH VVSTFPRVEAQEGLYREVLDAAGEKPVTFRTIDIGGDKVLPYFKGAQQEENPALGWRAIR HHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCHHCCCCCCCCCCCCEEEEE LTLDRPGLLRTQIRALLKAAGGRELKLMLPMVTEIDEVRQARAIIDREVRHLSRFAHLLP EEECCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSLKLGAMIEVPALLWQLEELMQAVDFVSVGSNDLFQFITAADRGNTLISNRFDPLGVPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHH LRVLKQIAAAGQATHTPVTLCGELAGKPISAMALLGIGYRSISMNSASIGPVKAMLCELP HHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH LQKLSERLEAALANRSGKIDIRAELQQFASEYDIPL HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]