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The map label for this gene is ydjR [C]

Identifier: 110635311

GI number: 110635311

Start: 3241683

End: 3242258

Strand: Reverse

Name: ydjR [C]

Synonym: Meso_2982

Alternate gene names: 110635311

Gene position: 3242258-3241683 (Counterclockwise)

Preceding gene: 110635312

Following gene: 110635305

Centisome position: 73.48

GC content: 58.33

Gene sequence:

>576_bases
ATGCGCATTCTCCGTGCTGGCGATCATAAGCGCATGCCGTGGAAGAACGGTAAGGGGGAGACGGTGGAAATCGCCGTCTT
TCCGCCCGGCGCATCGGTTGGCGATTTCGACTGGCGCATCAGCATGGCGACCGTTGCGGAAGACGGCCCGTTTTCCGTTT
TCGACGGTATCGATCGCACTCTATCCATCTTGAGCGGTGAAGGGCTGGAGCTTTTCGTGGAGGGGCGGGAGCCGGTCGCA
TTGAGGCAGGATACGGTTCCGCACGCCTTTCCGGCCGATGTCGCGACGTCAGCCATGTTGCTGAAGGATACCGTCACCGA
CCTCAATGTCATGACGCGACGTGGCGGGTATGCGCATCGCGTAATCTGCTACAGCCTGCCGCAGACGATCGCGCTCCCAT
CAGCGGATTCGGACCTTTTTGTATTGGCTCCGGATGGCTGCAGCAGCTCAACCCATAATATCATTTTGGAACCATATGAT
GCCTTGCTGATGACCGGAGAGCAGGAGGCGATTCATCTCGAGCCGAGTGGTGCTGACCCGCGGCTCTTTGTGATCATCAT
CCGAACACAAGCCTGA

Upstream 100 bases:

>100_bases
ACCGGCGTCATGCGCCACGCGGATGCGGGTTACGAAATCGCGGTCGACTGCGCCAAGGAGAAAGGTCTGCGCCTTCCCGG
CATTCTCGGGAACTGATCCG

Downstream 100 bases:

>100_bases
CTGCTCGAACCATTTGTACCTAGCAGGGCATGATAGACAAAGCGCCGGTGAGGGAGCCAAGTGTGCTTCTCACCGGTCGC
TAAAGTCGTAATTTCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRILRAGDHKRMPWKNGKGETVEIAVFPPGASVGDFDWRISMATVAEDGPFSVFDGIDRTLSILSGEGLELFVEGREPVA
LRQDTVPHAFPADVATSAMLLKDTVTDLNVMTRRGGYAHRVICYSLPQTIALPSADSDLFVLAPDGCSSSTHNIILEPYD
ALLMTGEQEAIHLEPSGADPRLFVIIIRTQA

Sequences:

>Translated_191_residues
MRILRAGDHKRMPWKNGKGETVEIAVFPPGASVGDFDWRISMATVAEDGPFSVFDGIDRTLSILSGEGLELFVEGREPVA
LRQDTVPHAFPADVATSAMLLKDTVTDLNVMTRRGGYAHRVICYSLPQTIALPSADSDLFVLAPDGCSSSTHNIILEPYD
ALLMTGEQEAIHLEPSGADPRLFVIIIRTQA
>Mature_191_residues
MRILRAGDHKRMPWKNGKGETVEIAVFPPGASVGDFDWRISMATVAEDGPFSVFDGIDRTLSILSGEGLELFVEGREPVA
LRQDTVPHAFPADVATSAMLLKDTVTDLNVMTRRGGYAHRVICYSLPQTIALPSADSDLFVLAPDGCSSSTHNIILEPYD
ALLMTGEQEAIHLEPSGADPRLFVIIIRTQA

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=111, Percent_Identity=37.8378378378378, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20764; Mature: 20764

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILRAGDHKRMPWKNGKGETVEIAVFPPGASVGDFDWRISMATVAEDGPFSVFDGIDRT
CCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHCCHHH
LSILSGEGLELFVEGREPVALRQDTVPHAFPADVATSAMLLKDTVTDLNVMTRRGGYAHR
HHHHCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHEEHHHHCCCEEEECCCCCEEE
VICYSLPQTIALPSADSDLFVLAPDGCSSSTHNIILEPYDALLMTGEQEAIHLEPSGADP
EEEEECCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCC
RLFVIIIRTQA
EEEEEEEEECC
>Mature Secondary Structure
MRILRAGDHKRMPWKNGKGETVEIAVFPPGASVGDFDWRISMATVAEDGPFSVFDGIDRT
CCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHCCHHH
LSILSGEGLELFVEGREPVALRQDTVPHAFPADVATSAMLLKDTVTDLNVMTRRGGYAHR
HHHHCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHEEHHHHCCCEEEECCCCCEEE
VICYSLPQTIALPSADSDLFVLAPDGCSSSTHNIILEPYDALLMTGEQEAIHLEPSGADP
EEEEECCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCC
RLFVIIIRTQA
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]