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The map label for this gene is amaB [H]

Identifier: 110634887

GI number: 110634887

Start: 2728693

End: 2729961

Strand: Reverse

Name: amaB [H]

Synonym: Meso_2546

Alternate gene names: 110634887

Gene position: 2729961-2728693 (Counterclockwise)

Preceding gene: 110634888

Following gene: 110634886

Centisome position: 61.87

GC content: 63.67

Gene sequence:

>1269_bases
ATGAACTTGGTGGAAAGGCCTAACCGGCTCGCAATCGATGCGCAGCGCCTGTGGTCGAATTTGATGGACCTGGCGGCGAT
CACCGATAATGCTCGGCCCTACACCCGCCGGTCGTTCAGCGGCCTTTTCGTGGAAGGGCGCACGTGGCTGCGCCGCCGTT
TTCTTGATGCTGGCATGACCGTGCGTGAGGATGCAGCGCCGAACCTGATCGGACGCCTGGAAGGGCAGGACCCGGCACTG
CCGGTGATCGCGATCGGTTCGCATTCCGATACGGTCCCCTCAGGCGGACGGTTCGACGGCATCCTCGGCGTCCTTGCAGG
GCTGGAAGCTGTGCGTTCGCTCGCGGACCGAGGCATCCGCCTCCGGCACACCGTCGAGGTGATAGATTTTCTTGCCGAAG
AGCCAAGCGAATACGGTCTCTCCTGCGTGGGAAGCCGCGTGATGAGTGGGAGCCTCGAGGATCGGCATCTGGCCCTGACT
GCGCCAGATGGCGAGCAGTTGATCGACGCGATGGAACGAATAGGCGGCAAACCCCATGACCGGGCTGGCGCAAAGCGGAC
CGATATCGGCGCCTTTCTCGAACTGCACATCGAGCAGGGGCGGGTTCTGGAGCAATCGGGGACAGATATCGGGATTGTGA
CCGGGATTGTCGGCATCGTCCGAGTCGAGATCGTCTTCCAGGGTGCTGCCGACCATGCCGGGACGACTCCCATGGATTTG
CGGGCGGATGCACTGGTCGCCGCCGCGGAAACCGTCATGCAGGTGTGTGAGAGTGCCGAGAAGCTTGCCCGGAAGCGCTT
CTTCGTGGCCACTACCGGTGTGATTGCCTCCGAGCCGAATGCCGCAAATGTCGTGCCCGGAAGAGTGAGGCTGATCGTCG
AGGCACGGTCCGAGCACGTGGCGGATTTGGAAACCTTCCTCGCGGAGCTGGACGCTTTCACCAGTGGCGCGGCAGTGCGT
TCGCGGGTAAAGCGGACGGCGTTCACCGAACTCTCGCGTTCGCTGCCGTCGCCTTGCAACGAGGCGCTGCGAGGCCATTT
GGCGGCTGCCGCCGAAAGCCTCGGCCTTTCGACCCGCGAGATGCCGAGCGGCGCAGGCCATGATGCCGCCTTCATGGGCA
AGATCGCGCCGATGGCGATGATTTTCGTTCCCAGCAAGGACGGCCGCAGCCATTGCCCTGAGGAATGGACGGCGCCGGAG
CAATGCGCCGCAGGCGCCGGAGTGCTGCTGGAAGCGTTGATCCGCATCGACGCAGCACTGGAACATTGA

Upstream 100 bases:

>100_bases
TCGGTGGCTATGACATGGGCATCTATCAGAACATCGGCGCATGGCTTCGACGCGTCGAAGCCCAGCCCGGCTGGGAGCCG
CTGGTCGTTGAGGCCACGTC

Downstream 100 bases:

>100_bases
GTTGGCTTGTATGGCTGCAAGGAGGTTCGCGTGACCAGACCCCCTCTACCGATCCAGGCCCAGCGCGGCCCTCAGCTTCG
CTGTAAGGGCTGGCGGCAGG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNLVERPNRLAIDAQRLWSNLMDLAAITDNARPYTRRSFSGLFVEGRTWLRRRFLDAGMTVREDAAPNLIGRLEGQDPAL
PVIAIGSHSDTVPSGGRFDGILGVLAGLEAVRSLADRGIRLRHTVEVIDFLAEEPSEYGLSCVGSRVMSGSLEDRHLALT
APDGEQLIDAMERIGGKPHDRAGAKRTDIGAFLELHIEQGRVLEQSGTDIGIVTGIVGIVRVEIVFQGAADHAGTTPMDL
RADALVAAAETVMQVCESAEKLARKRFFVATTGVIASEPNAANVVPGRVRLIVEARSEHVADLETFLAELDAFTSGAAVR
SRVKRTAFTELSRSLPSPCNEALRGHLAAAAESLGLSTREMPSGAGHDAAFMGKIAPMAMIFVPSKDGRSHCPEEWTAPE
QCAAGAGVLLEALIRIDAALEH

Sequences:

>Translated_422_residues
MNLVERPNRLAIDAQRLWSNLMDLAAITDNARPYTRRSFSGLFVEGRTWLRRRFLDAGMTVREDAAPNLIGRLEGQDPAL
PVIAIGSHSDTVPSGGRFDGILGVLAGLEAVRSLADRGIRLRHTVEVIDFLAEEPSEYGLSCVGSRVMSGSLEDRHLALT
APDGEQLIDAMERIGGKPHDRAGAKRTDIGAFLELHIEQGRVLEQSGTDIGIVTGIVGIVRVEIVFQGAADHAGTTPMDL
RADALVAAAETVMQVCESAEKLARKRFFVATTGVIASEPNAANVVPGRVRLIVEARSEHVADLETFLAELDAFTSGAAVR
SRVKRTAFTELSRSLPSPCNEALRGHLAAAAESLGLSTREMPSGAGHDAAFMGKIAPMAMIFVPSKDGRSHCPEEWTAPE
QCAAGAGVLLEALIRIDAALEH
>Mature_422_residues
MNLVERPNRLAIDAQRLWSNLMDLAAITDNARPYTRRSFSGLFVEGRTWLRRRFLDAGMTVREDAAPNLIGRLEGQDPAL
PVIAIGSHSDTVPSGGRFDGILGVLAGLEAVRSLADRGIRLRHTVEVIDFLAEEPSEYGLSCVGSRVMSGSLEDRHLALT
APDGEQLIDAMERIGGKPHDRAGAKRTDIGAFLELHIEQGRVLEQSGTDIGIVTGIVGIVRVEIVFQGAADHAGTTPMDL
RADALVAAAETVMQVCESAEKLARKRFFVATTGVIASEPNAANVVPGRVRLIVEARSEHVADLETFLAELDAFTSGAAVR
SRVKRTAFTELSRSLPSPCNEALRGHLAAAAESLGLSTREMPSGAGHDAAFMGKIAPMAMIFVPSKDGRSHCPEEWTAPE
QCAAGAGVLLEALIRIDAALEH

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=390, Percent_Identity=34.6153846153846, Blast_Score=191, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45176; Mature: 45176

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVERPNRLAIDAQRLWSNLMDLAAITDNARPYTRRSFSGLFVEGRTWLRRRFLDAGMT
CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCE
VREDAAPNLIGRLEGQDPALPVIAIGSHSDTVPSGGRFDGILGVLAGLEAVRSLADRGIR
ECCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
LRHTVEVIDFLAEEPSEYGLSCVGSRVMSGSLEDRHLALTAPDGEQLIDAMERIGGKPHD
HHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
RAGAKRTDIGAFLELHIEQGRVLEQSGTDIGIVTGIVGIVRVEIVFQGAADHAGTTPMDL
CCCCCCCHHHHHHEEEECCCCEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
RADALVAAAETVMQVCESAEKLARKRFFVATTGVIASEPNAANVVPGRVRLIVEARSEHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCEEEEEEHHHHHH
ADLETFLAELDAFTSGAAVRSRVKRTAFTELSRSLPSPCNEALRGHLAAAAESLGLSTRE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHC
MPSGAGHDAAFMGKIAPMAMIFVPSKDGRSHCPEEWTAPEQCAAGAGVLLEALIRIDAAL
CCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
EH
CC
>Mature Secondary Structure
MNLVERPNRLAIDAQRLWSNLMDLAAITDNARPYTRRSFSGLFVEGRTWLRRRFLDAGMT
CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCE
VREDAAPNLIGRLEGQDPALPVIAIGSHSDTVPSGGRFDGILGVLAGLEAVRSLADRGIR
ECCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
LRHTVEVIDFLAEEPSEYGLSCVGSRVMSGSLEDRHLALTAPDGEQLIDAMERIGGKPHD
HHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
RAGAKRTDIGAFLELHIEQGRVLEQSGTDIGIVTGIVGIVRVEIVFQGAADHAGTTPMDL
CCCCCCCHHHHHHEEEECCCCEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
RADALVAAAETVMQVCESAEKLARKRFFVATTGVIASEPNAANVVPGRVRLIVEARSEHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCEEEEEEHHHHHH
ADLETFLAELDAFTSGAAVRSRVKRTAFTELSRSLPSPCNEALRGHLAAAAESLGLSTRE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHC
MPSGAGHDAAFMGKIAPMAMIFVPSKDGRSHCPEEWTAPEQCAAGAGVLLEALIRIDAAL
CCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
EH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]