| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gstA [H]
Identifier: 110634888
GI number: 110634888
Start: 2729958
End: 2730569
Strand: Reverse
Name: gstA [H]
Synonym: Meso_2547
Alternate gene names: 110634888
Gene position: 2730569-2729958 (Counterclockwise)
Preceding gene: 110634889
Following gene: 110634887
Centisome position: 61.88
GC content: 61.6
Gene sequence:
>612_bases ATGTACCGTCTTCACGACAGTCTGATGTCCTGCAACGCCTGGAAGGTGCGCATCCTGCTGCGCCAACTCGGGATACCCTT CGAAAGAGTCACTCACGACCTTGCGAAAGGTGCGGCCAAGACCGATGCCTTCACCGCCATGAATCCGCTTCAGCGCGTGC CGGTACTGGAGCTGGAGGACGGCCGCGCGATCGCGGAATCGGGTGCGATCCTGCTCTATCTTGCGGAAGGAACACCGCTT CTGCCGACCGAGCCGCTTGCTCGGGCTCAGGTCACTTCATGGCTGTTCTTTGAGCAAGCCGACCTGCTGAAGCCCCTGGC GCTGCCGCGCTTCTACAATCTGCGCGGAACGCAAGCCGAGAATGCCGAGCGTATGCGATTCTATCATGAGGCCGGCAAGG CGGGCCTCTCTCGGCTTGACGGGTGTCTCGCGGGCCGCGAATGGATCACTGATGCCGGCTTCACCATCGCCGATATCGCG CTTTACGGCTACGTCTCCCAAGCCCATTTCGGTGGCTATGACATGGGCATCTATCAGAACATCGGCGCATGGCTTCGACG CGTCGAAGCCCAGCCCGGCTGGGAGCCGCTGGTCGTTGAGGCCACGTCATGA
Upstream 100 bases:
>100_bases CCAAGTTTCCAATCGGCAAAGGCGCGCTCGATCCGGCGGTCTACCCGGAAGCCGAAGAGGCAATGGGCGTCGATTTGCGT TCCTATCTGTGAGTATCGCC
Downstream 100 bases:
>100_bases ACTTGGTGGAAAGGCCTAACCGGCTCGCAATCGATGCGCAGCGCCTGTGGTCGAATTTGATGGACCTGGCGGCGATCACC GATAATGCTCGGCCCTACAC
Product: glutathione S-transferase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MYRLHDSLMSCNAWKVRILLRQLGIPFERVTHDLAKGAAKTDAFTAMNPLQRVPVLELEDGRAIAESGAILLYLAEGTPL LPTEPLARAQVTSWLFFEQADLLKPLALPRFYNLRGTQAENAERMRFYHEAGKAGLSRLDGCLAGREWITDAGFTIADIA LYGYVSQAHFGGYDMGIYQNIGAWLRRVEAQPGWEPLVVEATS
Sequences:
>Translated_203_residues MYRLHDSLMSCNAWKVRILLRQLGIPFERVTHDLAKGAAKTDAFTAMNPLQRVPVLELEDGRAIAESGAILLYLAEGTPL LPTEPLARAQVTSWLFFEQADLLKPLALPRFYNLRGTQAENAERMRFYHEAGKAGLSRLDGCLAGREWITDAGFTIADIA LYGYVSQAHFGGYDMGIYQNIGAWLRRVEAQPGWEPLVVEATS >Mature_203_residues MYRLHDSLMSCNAWKVRILLRQLGIPFERVTHDLAKGAAKTDAFTAMNPLQRVPVLELEDGRAIAESGAILLYLAEGTPL LPTEPLARAQVTSWLFFEQADLLKPLALPRFYNLRGTQAENAERMRFYHEAGKAGLSRLDGCLAGREWITDAGFTIADIA LYGYVSQAHFGGYDMGIYQNIGAWLRRVEAQPGWEPLVVEATS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=197, Percent_Identity=27.4111675126904, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI87082195, Length=204, Percent_Identity=29.4117647058824, Blast_Score=63, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864598, Length=180, Percent_Identity=28.8888888888889, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864594, Length=191, Percent_Identity=26.7015706806283, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI17933730, Length=198, Percent_Identity=24.7474747474747, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI28571670, Length=180, Percent_Identity=28.3333333333333, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17864592, Length=188, Percent_Identity=27.1276595744681, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922532, Length=187, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24646251, Length=205, Percent_Identity=27.3170731707317, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 22641; Mature: 22641
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLHDSLMSCNAWKVRILLRQLGIPFERVTHDLAKGAAKTDAFTAMNPLQRVPVLELED CCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCEEEECC GRAIAESGAILLYLAEGTPLLPTEPLARAQVTSWLFFEQADLLKPLALPRFYNLRGTQAE CCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC NAERMRFYHEAGKAGLSRLDGCLAGREWITDAGFTIADIALYGYVSQAHFGGYDMGIYQN CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH IGAWLRRVEAQPGWEPLVVEATS HHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure MYRLHDSLMSCNAWKVRILLRQLGIPFERVTHDLAKGAAKTDAFTAMNPLQRVPVLELED CCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCEEEECC GRAIAESGAILLYLAEGTPLLPTEPLARAQVTSWLFFEQADLLKPLALPRFYNLRGTQAE CCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC NAERMRFYHEAGKAGLSRLDGCLAGREWITDAGFTIADIALYGYVSQAHFGGYDMGIYQN CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH IGAWLRRVEAQPGWEPLVVEATS HHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA