| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634878
Identifier: 110634878
GI number: 110634878
Start: 2717474
End: 2717866
Strand: Reverse
Name: 110634878
Synonym: Meso_2537
Alternate gene names: NA
Gene position: 2717866-2717474 (Counterclockwise)
Preceding gene: 110634880
Following gene: 110634877
Centisome position: 61.6
GC content: 61.58
Gene sequence:
>393_bases ATGCCGAAAGGTTACAAGGAGATGCTTGCGGAGGCCGACGCGGTCGTCAAATCCGTGAGCGTCGAGGAGATGGCTGCGCA GCACGGTTCCGATGAATTCGTGCTGGTCGACATCCGCGATCCGCGGGAGCTAGAGCGCGATGGGATGATTCCGTCCGCCT TCCATGCGCCGCGAGGCATGCTGGAATTCTGGATCGATCCCGAGAGCCCCTACCACAAGCCGAAATTCGCCGAAGGCAAG ACATATGTCTTCTATTGCGCGTCCGGCTGGCGGTCGCTCCTTGCCGCCCGGCTGGCGATGGAGATGGGAATCGATGCACG CAGCCTTCGTGGCGGCTTTGGAGACTGGAAGCGCGCCGGGTATCCGGTTGCCCAGAAGACCAAGCAGGGTTGA
Upstream 100 bases:
>100_bases TATCGAAAGCGAAGCCGCTCGACAAACCCTATTGTTCGCGGCATCGATGAATTTTGAGGCAGGCATTGCCTGCCTCAGCC GAGTGGGGAGAGGACAAAAG
Downstream 100 bases:
>100_bases GCGCGCAGATATCTCCAGTCCAGCGAGGATGACGGATGGATAAGTACGACGATGGATTGCCGCGTTGCGCGGCCAATTAT CAACCCATGACGCCCATCAG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese-Like Protein; Rhodanese Domain-Containing Protein; Rhodanese Domain Protein Sulfur Transferase; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Molybdopterin Biosynthesis Protein; Rhodanese-Like Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPKGYKEMLAEADAVVKSVSVEEMAAQHGSDEFVLVDIRDPRELERDGMIPSAFHAPRGMLEFWIDPESPYHKPKFAEGK TYVFYCASGWRSLLAARLAMEMGIDARSLRGGFGDWKRAGYPVAQKTKQG
Sequences:
>Translated_130_residues MPKGYKEMLAEADAVVKSVSVEEMAAQHGSDEFVLVDIRDPRELERDGMIPSAFHAPRGMLEFWIDPESPYHKPKFAEGK TYVFYCASGWRSLLAARLAMEMGIDARSLRGGFGDWKRAGYPVAQKTKQG >Mature_129_residues PKGYKEMLAEADAVVKSVSVEEMAAQHGSDEFVLVDIRDPRELERDGMIPSAFHAPRGMLEFWIDPESPYHKPKFAEGKT YVFYCASGWRSLLAARLAMEMGIDARSLRGGFGDWKRAGYPVAQKTKQG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14571; Mature: 14440
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKGYKEMLAEADAVVKSVSVEEMAAQHGSDEFVLVDIRDPRELERDGMIPSAFHAPRGM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCHHCCCCCC LEFWIDPESPYHKPKFAEGKTYVFYCASGWRSLLAARLAMEMGIDARSLRGGFGDWKRAG EEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCC YPVAQKTKQG CCCCCCCCCC >Mature Secondary Structure PKGYKEMLAEADAVVKSVSVEEMAAQHGSDEFVLVDIRDPRELERDGMIPSAFHAPRGM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCHHCCCCCC LEFWIDPESPYHKPKFAEGKTYVFYCASGWRSLLAARLAMEMGIDARSLRGGFGDWKRAG EEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCC YPVAQKTKQG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA