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The map label for this gene is yiaM [C]

Identifier: 110634858

GI number: 110634858

Start: 2695718

End: 2696206

Strand: Reverse

Name: yiaM [C]

Synonym: Meso_2517

Alternate gene names: 110634858

Gene position: 2696206-2695718 (Counterclockwise)

Preceding gene: 110634859

Following gene: 110634857

Centisome position: 61.1

GC content: 56.65

Gene sequence:

>489_bases
ATGAGCGGCTTTGATACTTTCTTCCACCGGACATGCCAGGTGCTTGCGTATGTCCTGTCGGCGCTGACGGTCCTTTCCCT
GGCCGCGATGTTTGTCGGTATCGTCGTTCAGGTCGTCGCCCGAACCCTGTTCAGCACGTCTGTGCTCTGGCTCGACGATT
TGCTCATGTCCTGTTTCACAGTGTCGATCTTTTGCGGTATCGCGCTGGCCTTTCGTGCCCGGGCTCACCTAGCCATATCG
ACCATTGCCGACAGCCTGCCAGTCGGTGCATCGCGCCTTCTCAATAGGCTGATCGATATCGGCTGCATATTTGCCATGGC
CGGAATCGGTTGGTTCGGCATCGAGTTCACGCAAAGCGGATTCGGCCAGTTCACCCCGGTCCTGCGGCTGCCGCTTGGCT
GGGTCTACATCATCATTCCCGTGTCGGCCGCACTGTCGATCCTCTTTATCCTCGAAAACCAACTAACAAGTACGAAAGCA
CCAACATGA

Upstream 100 bases:

>100_bases
TTTGGGACGTGGCGCGGGAATGCGTGCCGTTCATTCTCGCAATGACCGCCGTCGCTGCCTTGATCTGGATCTTTCCTCCT
CTGGTTACGTGGGTCGTGCC

Downstream 100 bases:

>100_bases
CAGAACCCGAGGTCAGTTCATTGCCCGCGCTCGCCTTCATCGGAGCCGGGGTTATGGGGCGGCCCATGATTGCGAATCTT
CGCAAAGCCGGCTTCGCCCT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSGFDTFFHRTCQVLAYVLSALTVLSLAAMFVGIVVQVVARTLFSTSVLWLDDLLMSCFTVSIFCGIALAFRARAHLAIS
TIADSLPVGASRLLNRLIDIGCIFAMAGIGWFGIEFTQSGFGQFTPVLRLPLGWVYIIIPVSAALSILFILENQLTSTKA
PT

Sequences:

>Translated_162_residues
MSGFDTFFHRTCQVLAYVLSALTVLSLAAMFVGIVVQVVARTLFSTSVLWLDDLLMSCFTVSIFCGIALAFRARAHLAIS
TIADSLPVGASRLLNRLIDIGCIFAMAGIGWFGIEFTQSGFGQFTPVLRLPLGWVYIIIPVSAALSILFILENQLTSTKA
PT
>Mature_161_residues
SGFDTFFHRTCQVLAYVLSALTVLSLAAMFVGIVVQVVARTLFSTSVLWLDDLLMSCFTVSIFCGIALAFRARAHLAIST
IADSLPVGASRLLNRLIDIGCIFAMAGIGWFGIEFTQSGFGQFTPVLRLPLGWVYIIIPVSAALSILFILENQLTSTKAP
T

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17541; Mature: 17410

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFDTFFHRTCQVLAYVLSALTVLSLAAMFVGIVVQVVARTLFSTSVLWLDDLLMSCFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIFCGIALAFRARAHLAISTIADSLPVGASRLLNRLIDIGCIFAMAGIGWFGIEFTQSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FGQFTPVLRLPLGWVYIIIPVSAALSILFILENQLTSTKAPT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGFDTFFHRTCQVLAYVLSALTVLSLAAMFVGIVVQVVARTLFSTSVLWLDDLLMSCFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIFCGIALAFRARAHLAISTIADSLPVGASRLLNRLIDIGCIFAMAGIGWFGIEFTQSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FGQFTPVLRLPLGWVYIIIPVSAALSILFILENQLTSTKAPT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA