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The map label for this gene is recN [H]

Identifier: 110634348

GI number: 110634348

Start: 2142187

End: 2143863

Strand: Reverse

Name: recN [H]

Synonym: Meso_1998

Alternate gene names: 110634348

Gene position: 2143863-2142187 (Counterclockwise)

Preceding gene: 110634349

Following gene: 110634347

Centisome position: 48.59

GC content: 66.55

Gene sequence:

>1677_bases
ATGCTGTCGCACCTTTCGATCCGCGATATCGTCCTGATCGAGCGGCTCGACATCGATTTTTCGGCTGGGCTTTCGGTGCT
GACCGGCGAGACCGGTGCGGGCAAATCCATCCTGCTCGATTCGCTCTCGCTTGCGCTTGGGGCCCGAGGGGATGCGTCGC
TGGTTCGCCATGGGGCGGAGCAGGGGCAGGTGACAGCCGTTTTCGACGTGCCGCTGATCCATCCCGCGCGGGAGATCCTG
CGTGATAACGCCATAGACGACCAGGGCGACATCATCCTGCGCCGCACACAGGCGGTGGACGGACGCACCCGCGTTTTCAT
CAACGATCAGCCGGCGAGCGTGGCACTGATGCGGCAGGTGGGCCGTGCGCTCGTGGAAATTCACGGCCAGCACGACGAGC
GGGCGCTGGTGGATGCGGCGGCCCATCGCGATCTCCTGGATGCGTTCGGCGGTCTTGGCGCCCGTGTGGATGCCGTGCGC
ATGGCTTGGCGTGCCTGGCGGCAGGCGGAGCAAGAGCTTGCGCGTCACCGCGCCCGGGTGGAGGCGGCAGCGCGCGAAGC
CGACTTCCTGCGCGCGTCCGTGGATGAGCTTTCCAAGCTCGACCCACAGCCGGGCGAGGAGACAGAACTTGCCGAAGAGC
GCGCGCGCATGATGCGGGCGGAGAAGATCGCCGCCGACATATCCGACGCGCAGGAGGTGTTGTCCGGCAACAATTCTCCG
GTTCCTGCGCTCGCGAGCCTTTTGCGCCGGCTTCAGCGAAAATCGCAGGAAGCGCCTGGCCTGCTCGAGGAGATCGTTGC
CTCCCTCGATGAAGCGCTTCTATCGCTCGACGCCACCCAGAGTGCCGTAGATGCCGCCATGCGGGCGAGCGAGTACGATC
CCGACCGGCAGGAGAAAGTCGAGGAGCGTCTGTTCGCGCTGCGCGCCGCCGCCCGCAAGCACAATGTGCTGGTGGATGAT
CTTGCCGCCTTGCGCGACCGGATGGACGCGGACCTTGCCGATCTCGACGCGGGCGAGGAAAAGCTTCTCCTCCTTGAGAA
GGAGGCTAGGACCCGCCGCACTGCCTATGACGAGGTCGCGGCGCTTTTGTCTGAGGAGCGGCGGCGCGCGGCGGAGGTGC
TGGCCGAGGCCGTCATGGCAGAGCTGCCGGCGCTGAAGCTGGAGCGTGCGCGCTTCATCGTGGAGATCCAGAGCGAACCG
GACGATCGAACGGAAGAGGGGATCGACCACGCGGAGTTCTGGGTGCAGACCAATCCCGGCACGCGGCCAGGCCCGATCAT
GAAGGTCGCCTCGGGCGGCGAGCTTTCGCGCTTCCTTCTTGCCCTAAAGGTCGCCCTAGCAGACAGGGGCTCTGCCCCTA
CGCTTGTTTTCGATGAGATCGACACCGGCGTGGGCGGCGCCGTGGCCGATGCCATCGGCCAGCGCCTGGCGCGCCTGTCG
GAGCGCATCCAGGTGCTTTCCGTAACTCATGCGCCGCAAGTGGCCGCCCGCGCAAGTACGCATTACCTGATCGCCAAGGA
CGGCGGTCATGACCGGGTGACCACCGGAGTTTCCGTGATGGACCTCGTGCAGCGTCAGGAGGAGATCGCACGCATGCTCG
CCGGCGCCACGATCACGGACGAAGCCCGCGCTGCCGCGGAGCGCCTTTTGCGCGAGAACGCTGCCGTGGCCGGGTAG

Upstream 100 bases:

>100_bases
CGCTTCTGCAGTCCGGCGGCCTTGAGCCGCGGGAAGACAGGGGTTCCTGGATTTCCAGGGCCGCGTCGATCATTACGGGG
GGCTAGCGCCCGGCGCGCCG

Downstream 100 bases:

>100_bases
GAGATTTTCCAGGTCCAGGGCATGGACATTCGGGACGAGCCCGAGCATGGCGACTGGCATGGGGCGTATCTGGCAGCTAT
TCGCATCGCTTTGAGACCGA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLSHLSIRDIVLIERLDIDFSAGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAEQGQVTAVFDVPLIHPAREIL
RDNAIDDQGDIILRRTQAVDGRTRVFINDQPASVALMRQVGRALVEIHGQHDERALVDAAAHRDLLDAFGGLGARVDAVR
MAWRAWRQAEQELARHRARVEAAAREADFLRASVDELSKLDPQPGEETELAEERARMMRAEKIAADISDAQEVLSGNNSP
VPALASLLRRLQRKSQEAPGLLEEIVASLDEALLSLDATQSAVDAAMRASEYDPDRQEKVEERLFALRAAARKHNVLVDD
LAALRDRMDADLADLDAGEEKLLLLEKEARTRRTAYDEVAALLSEERRRAAEVLAEAVMAELPALKLERARFIVEIQSEP
DDRTEEGIDHAEFWVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
ERIQVLSVTHAPQVAARASTHYLIAKDGGHDRVTTGVSVMDLVQRQEEIARMLAGATITDEARAAAERLLRENAAVAG

Sequences:

>Translated_558_residues
MLSHLSIRDIVLIERLDIDFSAGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAEQGQVTAVFDVPLIHPAREIL
RDNAIDDQGDIILRRTQAVDGRTRVFINDQPASVALMRQVGRALVEIHGQHDERALVDAAAHRDLLDAFGGLGARVDAVR
MAWRAWRQAEQELARHRARVEAAAREADFLRASVDELSKLDPQPGEETELAEERARMMRAEKIAADISDAQEVLSGNNSP
VPALASLLRRLQRKSQEAPGLLEEIVASLDEALLSLDATQSAVDAAMRASEYDPDRQEKVEERLFALRAAARKHNVLVDD
LAALRDRMDADLADLDAGEEKLLLLEKEARTRRTAYDEVAALLSEERRRAAEVLAEAVMAELPALKLERARFIVEIQSEP
DDRTEEGIDHAEFWVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
ERIQVLSVTHAPQVAARASTHYLIAKDGGHDRVTTGVSVMDLVQRQEEIARMLAGATITDEARAAAERLLRENAAVAG
>Mature_558_residues
MLSHLSIRDIVLIERLDIDFSAGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAEQGQVTAVFDVPLIHPAREIL
RDNAIDDQGDIILRRTQAVDGRTRVFINDQPASVALMRQVGRALVEIHGQHDERALVDAAAHRDLLDAFGGLGARVDAVR
MAWRAWRQAEQELARHRARVEAAAREADFLRASVDELSKLDPQPGEETELAEERARMMRAEKIAADISDAQEVLSGNNSP
VPALASLLRRLQRKSQEAPGLLEEIVASLDEALLSLDATQSAVDAAMRASEYDPDRQEKVEERLFALRAAARKHNVLVDD
LAALRDRMDADLADLDAGEEKLLLLEKEARTRRTAYDEVAALLSEERRRAAEVLAEAVMAELPALKLERARFIVEIQSEP
DDRTEEGIDHAEFWVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
ERIQVLSVTHAPQVAARASTHYLIAKDGGHDRVTTGVSVMDLVQRQEEIARMLAGATITDEARAAAERLLRENAAVAG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=31.7117117117117, Blast_Score=285, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60689; Mature: 60689

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHLSIRDIVLIERLDIDFSAGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAE
CCCCCCHHHHHHHHHCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFDVPLIHPAREILRDNAIDDQGDIILRRTQAVDGRTRVFINDQPASVALMRQV
CCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHH
GRALVEIHGQHDERALVDAAAHRDLLDAFGGLGARVDAVRMAWRAWRQAEQELARHRARV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAAREADFLRASVDELSKLDPQPGEETELAEERARMMRAEKIAADISDAQEVLSGNNSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VPALASLLRRLQRKSQEAPGLLEEIVASLDEALLSLDATQSAVDAAMRASEYDPDRQEKV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EERLFALRAAARKHNVLVDDLAALRDRMDADLADLDAGEEKLLLLEKEARTRRTAYDEVA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
ALLSEERRRAAEVLAEAVMAELPALKLERARFIVEIQSEPDDRTEEGIDHAEFWVQTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHCCCHHHEEEECCCC
TRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ERIQVLSVTHAPQVAARASTHYLIAKDGGHDRVTTGVSVMDLVQRQEEIARMLAGATITD
HHHHHHHCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EARAAAERLLRENAAVAG
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSHLSIRDIVLIERLDIDFSAGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAE
CCCCCCHHHHHHHHHCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFDVPLIHPAREILRDNAIDDQGDIILRRTQAVDGRTRVFINDQPASVALMRQV
CCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHH
GRALVEIHGQHDERALVDAAAHRDLLDAFGGLGARVDAVRMAWRAWRQAEQELARHRARV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAAREADFLRASVDELSKLDPQPGEETELAEERARMMRAEKIAADISDAQEVLSGNNSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VPALASLLRRLQRKSQEAPGLLEEIVASLDEALLSLDATQSAVDAAMRASEYDPDRQEKV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EERLFALRAAARKHNVLVDDLAALRDRMDADLADLDAGEEKLLLLEKEARTRRTAYDEVA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
ALLSEERRRAAEVLAEAVMAELPALKLERARFIVEIQSEPDDRTEEGIDHAEFWVQTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHCCCHHHEEEECCCC
TRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ERIQVLSVTHAPQVAARASTHYLIAKDGGHDRVTTGVSVMDLVQRQEEIARMLAGATITD
HHHHHHHCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EARAAAERLLRENAAVAG
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA