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The map label for this gene is yfiO [C]

Identifier: 110634349

GI number: 110634349

Start: 2143878

End: 2144744

Strand: Reverse

Name: yfiO [C]

Synonym: Meso_1999

Alternate gene names: 110634349

Gene position: 2144744-2143878 (Counterclockwise)

Preceding gene: 110634350

Following gene: 110634348

Centisome position: 48.61

GC content: 61.59

Gene sequence:

>867_bases
ATGCTTTTGACACGCCCTGCCAGCAGTCTCCGCCGGCCACGGCTCCCCGCGTTGGCTTTGGCCGCGCTCGCCGCTCCCCT
TTTGCTCGCCGGCTGCAACGCCGAAAAAGATCTGGACCTCTCGACCTATGTCGAGCAGACCGAGCCCGCCGACGTGCTTT
ACAATCAAGGCCTTGCCAATCTCAATGCCGGCCGCATGAGAGAAGCGATCGCGAAATTCGAGGCGGTCGACCGGCAGCAT
CCCTATTCGGAGTTTGCCCGCAAGGCGCTCATTATGAACGCCTTTGCCAATTACCGGCAGGGTAAGTATACCGAGGCGAT
CAATGCCGGCAAACGCTATGTCACGCTCTATCCTACGAGTGAGGACGCGGCCTATGCCCAATATCTCGTAGGCCTCAGCT
ATTTCCGCCAGATCAAGGACGTCACGCAGGATCAGCGTGAGGCACGGCTGACCATCGAGGCCATGCAGCAGGTGGTCGAT
GTCTGGCCCGAATCGGAATACGTGACCGACGCCCAGGCGAAGATCCGCTTTGCGCGCGACCAGCTCGCAGGCAAGGAGAT
GCAGGTCGGCCGGTATTATCTGGAGCGGCGCGAATATATCGCTGCCGTGCGCCGGTTCCGCGGCGTGGTGGAGAATTACG
GCAACACGCGCCATGTCGAAGAGGCGCTGGCGCGGCTGGTGGAAGCCTATCTTGCGATGGGCATTGCCTCCGAGGCGCAG
ACCGCCGCAGCCGTTCTCGGGCATAACTTCCCAGACAGCCAGTGGTACAAGGATTCCTACACGCTTCTGCAGTCCGGCGG
CCTTGAGCCGCGGGAAGACAGGGGTTCCTGGATTTCCAGGGCCGCGTCGATCATTACGGGGGGCTAG

Upstream 100 bases:

>100_bases
AAAATGTGCCAATAGCGCCAGATAGCGTTGCCGCGTCTTTGCTTTCTGCATATGACTGCGTGCACATCTTGGTTCCCCCA
TCCAGAGGAACGGACTGCGA

Downstream 100 bases:

>100_bases
CGCCCGGCGCGCCGATGCTGTCGCACCTTTCGATCCGCGATATCGTCCTGATCGAGCGGCTCGACATCGATTTTTCGGCT
GGGCTTTCGGTGCTGACCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLLTRPASSLRRPRLPALALAALAAPLLLAGCNAEKDLDLSTYVEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQH
PYSEFARKALIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVD
VWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLAMGIASEAQ
TAAAVLGHNFPDSQWYKDSYTLLQSGGLEPREDRGSWISRAASIITGG

Sequences:

>Translated_288_residues
MLLTRPASSLRRPRLPALALAALAAPLLLAGCNAEKDLDLSTYVEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQH
PYSEFARKALIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVD
VWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLAMGIASEAQ
TAAAVLGHNFPDSQWYKDSYTLLQSGGLEPREDRGSWISRAASIITGG
>Mature_288_residues
MLLTRPASSLRRPRLPALALAALAAPLLLAGCNAEKDLDLSTYVEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQH
PYSEFARKALIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVD
VWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLAMGIASEAQ
TAAAVLGHNFPDSQWYKDSYTLLQSGGLEPREDRGSWISRAASIITGG

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=240, Percent_Identity=27.5, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32331; Mature: 32331

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTRPASSLRRPRLPALALAALAAPLLLAGCNAEKDLDLSTYVEQTEPADVLYNQGLAN
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCCC
LNAGRMREAIAKFEAVDRQHPYSEFARKALIMNAFANYRQGKYTEAINAGKRYVTLYPTS
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCC
EDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVDVWPESEYVTDAQAKIRFARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLAMGIASEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAAAVLGHNFPDSQWYKDSYTLLQSGGLEPREDRGSWISRAASIITGG
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLTRPASSLRRPRLPALALAALAAPLLLAGCNAEKDLDLSTYVEQTEPADVLYNQGLAN
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCCC
LNAGRMREAIAKFEAVDRQHPYSEFARKALIMNAFANYRQGKYTEAINAGKRYVTLYPTS
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCC
EDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVDVWPESEYVTDAQAKIRFARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLAMGIASEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAAAVLGHNFPDSQWYKDSYTLLQSGGLEPREDRGSWISRAASIITGG
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]