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The map label for this gene is 110634177

Identifier: 110634177

GI number: 110634177

Start: 1961946

End: 1962629

Strand: Direct

Name: 110634177

Synonym: Meso_1827

Alternate gene names: NA

Gene position: 1961946-1962629 (Clockwise)

Preceding gene: 110634166

Following gene: 110634179

Centisome position: 44.46

GC content: 64.04

Gene sequence:

>684_bases
GTGCCGTTGCAGCAGGTCTTACGAGAGAAGGTGATGCTGGAAAGCAGGATGGGGGAAGAAGCCGCCGCTAGAAAGGGCCG
CAAATCGCCGCGCCGCTTCTCCCGGCTGCTGCAGGCAATGGCGGAGGATACGGCGCGCGAGCGCATATCCGTCAACGATC
TGGTCGTCGCGATGGGCGACCGCGCCTTTGGCGCGCTCATGCTCGTCTTCGCTCTTCCCAATGTGCTGCCCACGCCGCCG
GGAACCTCTGGCCTGCTCGGCTTGCCTCTCGTCTATCTTGCCGCCCAGCTCATGCTGGGACAGCGCCCCTGGCTGCCGAA
ATTCATTGGAAGCCGTTCGATCCGGCGCGAGGATTTTGCAGCATTCATCGAGCGTGCGGCGCCGTGGCTGCGCCGTGCCG
AACGCCTGCTGCGCCCGCGCCTGGTATTTCTCGTAAGTCCGGCCGCGGAGCGTCTGGTCGGAGCCGTCTGCCTGGTGCTC
GCGATCGTCCTTTTTCTGCCGGTTCCGCTTGGCAACATGCTGCCGGCCCTCTCTATCTCCGTTTTCTCCTTTGGGATTCT
CGGCCGAGATGGTCTTTGGGTCATCTGCGGCGTCCTTCTCGCCGTAATCTCTGCCGTTGTCGCGGGCGGCGTGGTCTTCG
CGCTGGTCAAAGGGGCGATCTTCGTCCTCACCAGGCGGTTCTAG

Upstream 100 bases:

>100_bases
GTTATCCCGCGGCCAAAAATCCGCGAAAGTTTATCCGCTTCGGGAATGAAAGTCTTAAGACGGCTGCGTCAAATTCAGGT
CACCAAAACAGGATAGACCG

Downstream 100 bases:

>100_bases
CCCCAAAGCCGGTATCGGTTTCGGAGGCACGGTGGACACTAACGACGCCAAGGCTTGGTCAGCCGGCTTCAGGCCCCGTG
GGGCTATAACGCTCCAGGGG

Product: exopolysaccharide synthesis, ExoD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPLQQVLREKVMLESRMGEEAAARKGRKSPRRFSRLLQAMAEDTARERISVNDLVVAMGDRAFGALMLVFALPNVLPTPP
GTSGLLGLPLVYLAAQLMLGQRPWLPKFIGSRSIRREDFAAFIERAAPWLRRAERLLRPRLVFLVSPAAERLVGAVCLVL
AIVLFLPVPLGNMLPALSISVFSFGILGRDGLWVICGVLLAVISAVVAGGVVFALVKGAIFVLTRRF

Sequences:

>Translated_227_residues
MPLQQVLREKVMLESRMGEEAAARKGRKSPRRFSRLLQAMAEDTARERISVNDLVVAMGDRAFGALMLVFALPNVLPTPP
GTSGLLGLPLVYLAAQLMLGQRPWLPKFIGSRSIRREDFAAFIERAAPWLRRAERLLRPRLVFLVSPAAERLVGAVCLVL
AIVLFLPVPLGNMLPALSISVFSFGILGRDGLWVICGVLLAVISAVVAGGVVFALVKGAIFVLTRRF
>Mature_226_residues
PLQQVLREKVMLESRMGEEAAARKGRKSPRRFSRLLQAMAEDTARERISVNDLVVAMGDRAFGALMLVFALPNVLPTPPG
TSGLLGLPLVYLAAQLMLGQRPWLPKFIGSRSIRREDFAAFIERAAPWLRRAERLLRPRLVFLVSPAAERLVGAVCLVLA
IVLFLPVPLGNMLPALSISVFSFGILGRDGLWVICGVLLAVISAVVAGGVVFALVKGAIFVLTRRF

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 24797; Mature: 24666

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQQVLREKVMLESRMGEEAAARKGRKSPRRFSRLLQAMAEDTARERISVNDLVVAMGD
CCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RAFGALMLVFALPNVLPTPPGTSGLLGLPLVYLAAQLMLGQRPWLPKFIGSRSIRREDFA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHH
AFIERAAPWLRRAERLLRPRLVFLVSPAAERLVGAVCLVLAIVLFLPVPLGNMLPALSIS
HHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VFSFGILGRDGLWVICGVLLAVISAVVAGGVVFALVKGAIFVLTRRF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLQQVLREKVMLESRMGEEAAARKGRKSPRRFSRLLQAMAEDTARERISVNDLVVAMGD
CHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RAFGALMLVFALPNVLPTPPGTSGLLGLPLVYLAAQLMLGQRPWLPKFIGSRSIRREDFA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHH
AFIERAAPWLRRAERLLRPRLVFLVSPAAERLVGAVCLVLAIVLFLPVPLGNMLPALSIS
HHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VFSFGILGRDGLWVICGVLLAVISAVVAGGVVFALVKGAIFVLTRRF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]