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The map label for this gene is ntaR [H]

Identifier: 110634179

GI number: 110634179

Start: 1964110

End: 1964850

Strand: Direct

Name: ntaR [H]

Synonym: Meso_1829

Alternate gene names: 110634179

Gene position: 1964110-1964850 (Clockwise)

Preceding gene: 110634177

Following gene: 110634190

Centisome position: 44.51

GC content: 58.97

Gene sequence:

>741_bases
GTGCATTCCAACAGCAAGCGCAGCGTAAAAAACGCGACGCGCCCGAAGCACAGCAATCCCGACGCTGGACAAAAGAGCGG
CAGCATCACGGATCGTGTCTATGAGGAGGTCAAGCTGATGGCGATGACCTACCGCTTCCGGCCCGGCGAACGGATCAACG
AGGTCCTCCTTGCGGAACAGCTGCAGGTGAGCCGCACGCCGCTTCGCGAAGCGCTGAACCGCCTGTCCTCCGAAGGCTAT
ATCAGCGTCGCTCCCAATCGCGGCTTTATCGGCCGCGAGTTGGATCCAACCGAAATTCAGGGGCTATTCGAGCTTCGCTC
CATTCTCGAGCAAGGGATCGTGCGTCTGGCCTGTGAGCGCGCAAGCGATGAGGAGCTTGAGGCGCTGAAGCTCTTCGCAG
ACGACCAGGCGGCAAATTGGAGGGAGAAGCCGACCTTACAGAACCCCCGCGATGACGAGGAGTTTCACTTGCGCATTGCG
AGAATGACGGGCAACGCAGAGTTGGTGAAGGCACTCGAGCAGATCAATGGGCGCATTCATTTTGTGCGCTGGATCGACTT
ACGCCTGCGCCCCCCTCCTCCCGGTGTCCGTCACAACGGCGAATTCATCGATATGCTGATGCGGCGCGATGCGGACGCCT
GTGCAAAGCGTATCGCCACCATGATCAACCGCCGCTATGACGAGATTGTCGAGGTTATTCGAGCCGGCATCGCCGACATC
TATGTTGGAGCCGAATTCTAA

Upstream 100 bases:

>100_bases
GGGGGATTTTTGTGCATACTCTATTGAACACAGAATGGTATGCTTAGAAATAGAATCAGACCGTCACACGTTCAATGATG
GCAGACAGGGAGAACGGCCG

Downstream 100 bases:

>100_bases
CGCGCAAGATTTGGCGCAGTTCAAGTGATGTCAGGCCGCGCGCGTCGCATCGAGCGAGGGGCGTGGGTGACCCAGATGCC
GCGTCGAAGGCTCCGACGAC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MHSNSKRSVKNATRPKHSNPDAGQKSGSITDRVYEEVKLMAMTYRFRPGERINEVLLAEQLQVSRTPLREALNRLSSEGY
ISVAPNRGFIGRELDPTEIQGLFELRSILEQGIVRLACERASDEELEALKLFADDQAANWREKPTLQNPRDDEEFHLRIA
RMTGNAELVKALEQINGRIHFVRWIDLRLRPPPPGVRHNGEFIDMLMRRDADACAKRIATMINRRYDEIVEVIRAGIADI
YVGAEF

Sequences:

>Translated_246_residues
MHSNSKRSVKNATRPKHSNPDAGQKSGSITDRVYEEVKLMAMTYRFRPGERINEVLLAEQLQVSRTPLREALNRLSSEGY
ISVAPNRGFIGRELDPTEIQGLFELRSILEQGIVRLACERASDEELEALKLFADDQAANWREKPTLQNPRDDEEFHLRIA
RMTGNAELVKALEQINGRIHFVRWIDLRLRPPPPGVRHNGEFIDMLMRRDADACAKRIATMINRRYDEIVEVIRAGIADI
YVGAEF
>Mature_246_residues
MHSNSKRSVKNATRPKHSNPDAGQKSGSITDRVYEEVKLMAMTYRFRPGERINEVLLAEQLQVSRTPLREALNRLSSEGY
ISVAPNRGFIGRELDPTEIQGLFELRSILEQGIVRLACERASDEELEALKLFADDQAANWREKPTLQNPRDDEEFHLRIA
RMTGNAELVKALEQINGRIHFVRWIDLRLRPPPPGVRHNGEFIDMLMRRDADACAKRIATMINRRYDEIVEVIRAGIADI
YVGAEF

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28179; Mature: 28179

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSNSKRSVKNATRPKHSNPDAGQKSGSITDRVYEEVKLMAMTYRFRPGERINEVLLAEQ
CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LQVSRTPLREALNRLSSEGYISVAPNRGFIGRELDPTEIQGLFELRSILEQGIVRLACER
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ASDEELEALKLFADDQAANWREKPTLQNPRDDEEFHLRIARMTGNAELVKALEQINGRIH
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHCCEEE
FVRWIDLRLRPPPPGVRHNGEFIDMLMRRDADACAKRIATMINRRYDEIVEVIRAGIADI
EEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAEF
EECCCC
>Mature Secondary Structure
MHSNSKRSVKNATRPKHSNPDAGQKSGSITDRVYEEVKLMAMTYRFRPGERINEVLLAEQ
CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LQVSRTPLREALNRLSSEGYISVAPNRGFIGRELDPTEIQGLFELRSILEQGIVRLACER
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ASDEELEALKLFADDQAANWREKPTLQNPRDDEEFHLRIARMTGNAELVKALEQINGRIH
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHCCEEE
FVRWIDLRLRPPPPGVRHNGEFIDMLMRRDADACAKRIATMINRRYDEIVEVIRAGIADI
EEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAEF
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA