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The map label for this gene is yebA [C]

Identifier: 110634139

GI number: 110634139

Start: 1911948

End: 1913219

Strand: Direct

Name: yebA [C]

Synonym: Meso_1788

Alternate gene names: 110634139

Gene position: 1911948-1913219 (Clockwise)

Preceding gene: 110634138

Following gene: 110634140

Centisome position: 43.33

GC content: 60.77

Gene sequence:

>1272_bases
ATGACAGGCAATGGGCGCTTCGACGGGCCTGACAATCCTTTAAGTCCCCTCACCATTGTTGTCGCCCGCGGGCAGGATGT
TCGGTTTTGGATTGTCAAGCCTTGGATGATCCGCATGTGCGCCACGGCATTGGCCGGGGTGGCCGTTGCGGGCGCCGTTT
TGGCTCTTTACCTGCTCGCCCCGAGCACGGGAACGCAAGGCGAGCCCGTGGTGCTTCAAGCTCGCATGCAGCGAGCCTAT
GAGGAGCGAATTTCCTCACTTCGAGCGGAACTCAACCGCGTCGCCACCCATCAATCCAGCGAGCAGCAGGCCCTGGAGCG
CAAGATCATGGAACTGCTCAGCAGGCAAGAGCGGCTGACGGAGCGCCACAGCTGGCTTGGTCCTCTCCTGGAGCGGGCGG
AACAGCTGAATGCGTCAAGCAAACCTATTCCTGTGCCCACCCCGCGCCCACAGATAGAAAACCCGGCGGAGAAGAAGGAG
GACAATGGCATCGAACATGTGGCCATTGCAGGCAATGCCTTTGCCAGCGTGGCGACGCCAAAGGTGCCTTGGCCTATTCG
CAAGGAAAACCCGCTCGACAACTCGAACGAGCTCTTTCAGGCCCTGGATCAATCACTTCAGAATCTTGAGTCAGATCAGG
TCGAGCGTGTCGACAGGCTGACCGAAGAGACATACCGGACCATCGAAGCCATTGGCGAAGCCCTCGATGCAGCCGGGATC
AGCATTTCAACTCCCGATCAGAAAAACGCCGGCGGTCCGCTTTTGCCCGTCTCGGCCACGCTCCCTTTTGAGGATAAGGC
GCGGGAGCTTGATGAGGCGCTTAGCCGTCTTGAAGCGCTAAAGCGCAAGGTCCGCCGCATACCGATCGCTCATCCGGTGC
CTGGAGCTCAGGTCACAAGCAGTTTCGGCATGCGCCGAGATCCGCTTCTTGGGCGAACCGCTTATCATGCGGGCATGGAT
TTCCGGGCGTCCCCCGGCTCGCCCGTCCGCGCGGCTGCTTCCGGCATTGTCGTGGAGGCAGGCTGGAACGGTGGCTACGG
GCGCATGGTGGAGGTCGACCACGGCAACGGAATCAGGACGCGCTACGCGCATCTGAGCAACGTGCTGGTGAAGATCGGGG
ATCGCATCGACAATGGCGGTGTCATCGGTCGCGTCGGCAGCAGCGGACGTTCCACCGGGCCGCATCTCCACTATGAGATC
CGCCAGAACCACCGCCCCATAAATCCACGGAAGCTTATTAAGGCTGGCCAACATCTGGCTGAGCTGCTCTGA

Upstream 100 bases:

>100_bases
GCAGGAGCCCCGCCTCCGCGCGGTAAGGATTTGTTAACCTTAATACTGTCTAGTCGGCGTTCTCGGCAAATCTGCAGCAG
GCAGTCGATCCGTGAAGCTG

Downstream 100 bases:

>100_bases
AACCCGGCCCGGTTCGAGGCGCACAAAAAATCTTCGCCTGAGCGAGCCGCGATGTCGAATCCGGTCCCGGTGATACGTCC
TCGGAGGGTGCTGCGCGGAT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTGNGRFDGPDNPLSPLTIVVARGQDVRFWIVKPWMIRMCATALAGVAVAGAVLALYLLAPSTGTQGEPVVLQARMQRAY
EERISSLRAELNRVATHQSSEQQALERKIMELLSRQERLTERHSWLGPLLERAEQLNASSKPIPVPTPRPQIENPAEKKE
DNGIEHVAIAGNAFASVATPKVPWPIRKENPLDNSNELFQALDQSLQNLESDQVERVDRLTEETYRTIEAIGEALDAAGI
SISTPDQKNAGGPLLPVSATLPFEDKARELDEALSRLEALKRKVRRIPIAHPVPGAQVTSSFGMRRDPLLGRTAYHAGMD
FRASPGSPVRAAASGIVVEAGWNGGYGRMVEVDHGNGIRTRYAHLSNVLVKIGDRIDNGGVIGRVGSSGRSTGPHLHYEI
RQNHRPINPRKLIKAGQHLAELL

Sequences:

>Translated_423_residues
MTGNGRFDGPDNPLSPLTIVVARGQDVRFWIVKPWMIRMCATALAGVAVAGAVLALYLLAPSTGTQGEPVVLQARMQRAY
EERISSLRAELNRVATHQSSEQQALERKIMELLSRQERLTERHSWLGPLLERAEQLNASSKPIPVPTPRPQIENPAEKKE
DNGIEHVAIAGNAFASVATPKVPWPIRKENPLDNSNELFQALDQSLQNLESDQVERVDRLTEETYRTIEAIGEALDAAGI
SISTPDQKNAGGPLLPVSATLPFEDKARELDEALSRLEALKRKVRRIPIAHPVPGAQVTSSFGMRRDPLLGRTAYHAGMD
FRASPGSPVRAAASGIVVEAGWNGGYGRMVEVDHGNGIRTRYAHLSNVLVKIGDRIDNGGVIGRVGSSGRSTGPHLHYEI
RQNHRPINPRKLIKAGQHLAELL
>Mature_422_residues
TGNGRFDGPDNPLSPLTIVVARGQDVRFWIVKPWMIRMCATALAGVAVAGAVLALYLLAPSTGTQGEPVVLQARMQRAYE
ERISSLRAELNRVATHQSSEQQALERKIMELLSRQERLTERHSWLGPLLERAEQLNASSKPIPVPTPRPQIENPAEKKED
NGIEHVAIAGNAFASVATPKVPWPIRKENPLDNSNELFQALDQSLQNLESDQVERVDRLTEETYRTIEAIGEALDAAGIS
ISTPDQKNAGGPLLPVSATLPFEDKARELDEALSRLEALKRKVRRIPIAHPVPGAQVTSSFGMRRDPLLGRTAYHAGMDF
RASPGSPVRAAASGIVVEAGWNGGYGRMVEVDHGNGIRTRYAHLSNVLVKIGDRIDNGGVIGRVGSSGRSTGPHLHYEIR
QNHRPINPRKLIKAGQHLAELL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=131, Percent_Identity=41.2213740458015, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87082297, Length=93, Percent_Identity=40.8602150537634, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46271; Mature: 46140

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNGRFDGPDNPLSPLTIVVARGQDVRFWIVKPWMIRMCATALAGVAVAGAVLALYLLA
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSTGTQGEPVVLQARMQRAYEERISSLRAELNRVATHQSSEQQALERKIMELLSRQERLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ERHSWLGPLLERAEQLNASSKPIPVPTPRPQIENPAEKKEDNGIEHVAIAGNAFASVATP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHCCC
KVPWPIRKENPLDNSNELFQALDQSLQNLESDQVERVDRLTEETYRTIEAIGEALDAAGI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SISTPDQKNAGGPLLPVSATLPFEDKARELDEALSRLEALKRKVRRIPIAHPVPGAQVTS
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SFGMRRDPLLGRTAYHAGMDFRASPGSPVRAAASGIVVEAGWNGGYGRMVEVDHGNGIRT
HCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEEECCCCHHH
RYAHLSNVLVKIGDRIDNGGVIGRVGSSGRSTGPHLHYEIRQNHRPINPRKLIKAGQHLA
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
ELL
HHC
>Mature Secondary Structure 
TGNGRFDGPDNPLSPLTIVVARGQDVRFWIVKPWMIRMCATALAGVAVAGAVLALYLLA
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSTGTQGEPVVLQARMQRAYEERISSLRAELNRVATHQSSEQQALERKIMELLSRQERLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ERHSWLGPLLERAEQLNASSKPIPVPTPRPQIENPAEKKEDNGIEHVAIAGNAFASVATP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHCCC
KVPWPIRKENPLDNSNELFQALDQSLQNLESDQVERVDRLTEETYRTIEAIGEALDAAGI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SISTPDQKNAGGPLLPVSATLPFEDKARELDEALSRLEALKRKVRRIPIAHPVPGAQVTS
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SFGMRRDPLLGRTAYHAGMDFRASPGSPVRAAASGIVVEAGWNGGYGRMVEVDHGNGIRT
HCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEEECCCCHHH
RYAHLSNVLVKIGDRIDNGGVIGRVGSSGRSTGPHLHYEIRQNHRPINPRKLIKAGQHLA
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
ELL
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]