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The map label for this gene is ybfB [H]

Identifier: 110634140

GI number: 110634140

Start: 1913370

End: 1914572

Strand: Direct

Name: ybfB [H]

Synonym: Meso_1789

Alternate gene names: 110634140

Gene position: 1913370-1914572 (Clockwise)

Preceding gene: 110634139

Following gene: 110634142

Centisome position: 43.36

GC content: 62.68

Gene sequence:

>1203_bases
ATGAGCCATTCTTATCGCTGGGTGATTGTCGGTGCAGGCGCGCTGATGGGATGCGTCGCGATCGGGGCGATGTTCTCATT
GGCGATATTCCTTGAGCCCGTCGCCTCCGAAACGCTTTGGTCGCGCGCAGGCATTTCAAGCGCGATGACACTTAATTTCA
TTGTCATGGGCCTCGGCGGGTTCGCCTGGGGCGCGGCGAGCGATCGCTTTGGAGCGCGCATCGTCGTGCTGACGGGCGCT
GTACTTCTGGGTCTTGCTCTGGTCCTGGCCAGTCGCGCAGCCTCGCTCATGGAATTCCAGCTGACCTACGGTATCCTCGT
CGGCCTGTCGGCAAGCGCGTTTTTCGCGCCGATGATCAGCGCGACCACCGCGTGGTTCGACAAGAATCGCAGTCTTGCGG
TCTCGCTGGTTTCCGCTGGGATGGGCGTGGCGCCGATGACGATCTCGCCGCTGGCGCGCTGGCTCATCTCTGCCTACGAC
TGGCGCACCGCAATGTTCCTCATCGGCCTTCTCGCCTGGGTTCTGCTGGTCCCGGCCGCCCTTCTCATTCGCCGCCCCCC
GCCCTCTGTTCAAGACGCGCACGCCTCCGGCTTCTCGGGCGAAAGTGGCGGCTTTTCCGTCGCACGGGCGCTGCGCTCGC
CACAATTTGTTGTGCTCGGTCTCACATTCTTCGCCTGCTGCGCGGCTCATTCAGGTCCAATCTTCCATATGGTGAGCTAC
GCCATGGTTTGCGGCATAGCCCCCATGGCGGCGGTCAGCATCTACAGCGTCGAGGGGCTTGCAGGTCTCGGAGGGCGGAT
CCTCTTCGGCGTCCTGGCAGACCGGATCGGCGTGAAGCAGATACTTGTTGCCGGACTGGCGCTACAGGCCGTCGCAATCA
GCGCCTATCTTTTCGTGAGCCGGCTTGAGGAATTCTATCTTCTTGCGACGATTTTCGGCGCTGTCTATGGCGGCGTCATG
CCCCTTTATGCCGTGCTGGCCCGCGAATATTTCGGACAGCGCATACTGGGAACAGTACTCGGTGCGGCAACGATGCTTTC
AAGCATCGGGATGGCGTTCGGGCCGCTGGCCGGCGGCTGGATCTACGATACGTTCCAAAGCTATGCTTGGCTGTTCATCG
GTTCGGCCATGGTCGGGCTCGGCGCGGCTGCTGTGGCCCTGGCCTTCCCGCCGCTGCCGCGCCTGAAGGCGCAGCCGGCA
TGA

Upstream 100 bases:

>100_bases
GATGTCGAATCCGGTCCCGGTGATACGTCCTCGGAGGGTGCTGCGCGGATCGTGACGCGCCGTGCAGCACGCGAATGGGG
CGTGTCACAGGGAAATTCAC

Downstream 100 bases:

>100_bases
CTTGAAAATCGTGAAATAAAAAACCCCGGGGCGAACCGGGGTTTTTTGGTTTTTCGCAAACGCCTATTCTGCGGCGCTTT
CCTTCTTGGCGGCCTTCTTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSHSYRWVIVGAGALMGCVAIGAMFSLAIFLEPVASETLWSRAGISSAMTLNFIVMGLGGFAWGAASDRFGARIVVLTGA
VLLGLALVLASRAASLMEFQLTYGILVGLSASAFFAPMISATTAWFDKNRSLAVSLVSAGMGVAPMTISPLARWLISAYD
WRTAMFLIGLLAWVLLVPAALLIRRPPPSVQDAHASGFSGESGGFSVARALRSPQFVVLGLTFFACCAAHSGPIFHMVSY
AMVCGIAPMAAVSIYSVEGLAGLGGRILFGVLADRIGVKQILVAGLALQAVAISAYLFVSRLEEFYLLATIFGAVYGGVM
PLYAVLAREYFGQRILGTVLGAATMLSSIGMAFGPLAGGWIYDTFQSYAWLFIGSAMVGLGAAAVALAFPPLPRLKAQPA

Sequences:

>Translated_400_residues
MSHSYRWVIVGAGALMGCVAIGAMFSLAIFLEPVASETLWSRAGISSAMTLNFIVMGLGGFAWGAASDRFGARIVVLTGA
VLLGLALVLASRAASLMEFQLTYGILVGLSASAFFAPMISATTAWFDKNRSLAVSLVSAGMGVAPMTISPLARWLISAYD
WRTAMFLIGLLAWVLLVPAALLIRRPPPSVQDAHASGFSGESGGFSVARALRSPQFVVLGLTFFACCAAHSGPIFHMVSY
AMVCGIAPMAAVSIYSVEGLAGLGGRILFGVLADRIGVKQILVAGLALQAVAISAYLFVSRLEEFYLLATIFGAVYGGVM
PLYAVLAREYFGQRILGTVLGAATMLSSIGMAFGPLAGGWIYDTFQSYAWLFIGSAMVGLGAAAVALAFPPLPRLKAQPA
>Mature_399_residues
SHSYRWVIVGAGALMGCVAIGAMFSLAIFLEPVASETLWSRAGISSAMTLNFIVMGLGGFAWGAASDRFGARIVVLTGAV
LLGLALVLASRAASLMEFQLTYGILVGLSASAFFAPMISATTAWFDKNRSLAVSLVSAGMGVAPMTISPLARWLISAYDW
RTAMFLIGLLAWVLLVPAALLIRRPPPSVQDAHASGFSGESGGFSVARALRSPQFVVLGLTFFACCAAHSGPIFHMVSYA
MVCGIAPMAAVSIYSVEGLAGLGGRILFGVLADRIGVKQILVAGLALQAVAISAYLFVSRLEEFYLLATIFGAVYGGVMP
LYAVLAREYFGQRILGTVLGAATMLSSIGMAFGPLAGGWIYDTFQSYAWLFIGSAMVGLGAAAVALAFPPLPRLKAQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=386, Percent_Identity=26.9430051813472, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI291621700, Length=347, Percent_Identity=24.7838616714697, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI24431958, Length=410, Percent_Identity=21.219512195122, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1789969, Length=306, Percent_Identity=24.5098039215686, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI87082404, Length=294, Percent_Identity=25.8503401360544, Blast_Score=72, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24639306, Length=193, Percent_Identity=27.979274611399, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281360217, Length=172, Percent_Identity=29.0697674418605, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573971, Length=172, Percent_Identity=29.0697674418605, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41794; Mature: 41663

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSYRWVIVGAGALMGCVAIGAMFSLAIFLEPVASETLWSRAGISSAMTLNFIVMGLGG
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCH
FAWGAASDRFGARIVVLTGAVLLGLALVLASRAASLMEFQLTYGILVGLSASAFFAPMIS
HHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATTAWFDKNRSLAVSLVSAGMGVAPMTISPLARWLISAYDWRTAMFLIGLLAWVLLVPAA
HHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIRRPPPSVQDAHASGFSGESGGFSVARALRSPQFVVLGLTFFACCAAHSGPIFHMVSY
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHH
AMVCGIAPMAAVSIYSVEGLAGLGGRILFGVLADRIGVKQILVAGLALQAVAISAYLFVS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEEFYLLATIFGAVYGGVMPLYAVLAREYFGQRILGTVLGAATMLSSIGMAFGPLAGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IYDTFQSYAWLFIGSAMVGLGAAAVALAFPPLPRLKAQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SHSYRWVIVGAGALMGCVAIGAMFSLAIFLEPVASETLWSRAGISSAMTLNFIVMGLGG
CCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCH
FAWGAASDRFGARIVVLTGAVLLGLALVLASRAASLMEFQLTYGILVGLSASAFFAPMIS
HHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATTAWFDKNRSLAVSLVSAGMGVAPMTISPLARWLISAYDWRTAMFLIGLLAWVLLVPAA
HHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIRRPPPSVQDAHASGFSGESGGFSVARALRSPQFVVLGLTFFACCAAHSGPIFHMVSY
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHH
AMVCGIAPMAAVSIYSVEGLAGLGGRILFGVLADRIGVKQILVAGLALQAVAISAYLFVS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEEFYLLATIFGAVYGGVMPLYAVLAREYFGQRILGTVLGAATMLSSIGMAFGPLAGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IYDTFQSYAWLFIGSAMVGLGAAAVALAFPPLPRLKAQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]