| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yceG [C]
Identifier: 110634116
GI number: 110634116
Start: 1886780
End: 1887955
Strand: Reverse
Name: yceG [C]
Synonym: Meso_1765
Alternate gene names: 110634116
Gene position: 1887955-1886780 (Counterclockwise)
Preceding gene: 110634117
Following gene: 110634115
Centisome position: 42.79
GC content: 60.88
Gene sequence:
>1176_bases GTGACTGACAGGAACGACCAGCCGTCGAGGACTTTCGTATTCAGTTCGGGCCGCGACGCACTTCGCCCTGAGGCTGCCAC GCCGCCGCCGCCGAAGCGTTCACGGCAGTCCCGTAACCAGTTTATCGTCTTCCTGAATTTCGTCGTCTCTTCCATCGTTT TCGTGCTGGTGGTCGCCGGCATCGCCTTTTACTTCGGCAAAAGCGCGTTCGAGGGGCCGGGACCTTCCACCACGACGCAG ACCGTTTTGATCAAGCCCAATACGGGCGTGCGGGAGATCGCAAGCATTCTGGAGAGCGAAGGCCTCATCAGCGATGCGCG GATCTTCATGATCGGGCTCAGGGTCCACGGCGCCGATAGCAAGCTCAAGGCAGGCGAATACGAGATCAAGGCTGGCGCTT CCATGCAGGACATCATGGAGCTCCTGGAGAGCGGCAAGTCGGTTCTCTATTCGCTGACCATTCCCGAAGGGCTTACGGTG GCGCAGGTCTTCGAGCGCATCGCCAAGACCGAAGAACTTGCAGGCGAGTTGCCGGAAGAGCTGCCACCTGAAGGAAGCCT TGCCGCCGATACCCTGCGTTTCACCCGCGGGCTTTCCCGCAAAGAGGTTGTCGAACGGCTGAAAGCGCAGCAAGAGGAAC TGGTGCAAAGCATTTGGCAGCGGCGATCCGAGGATCTCCCCATCGAGGATATCAACGCGTTCCTGACGCTTGCCTCGATC GTGGAGAAGGAGACCGGGCGCTCGGACGAACGCTCGCGCGTGGCCGCCGTTTTCCTCAACAGGCTGAAGCGTGGCATGCG GCTTCAATCAGACCCCACCGTGATCTATGGTATCTTTGGCGGCCAAGGAAAGCCGGCGGAACGGCCGATCTACCGGTCCG ATCTCGACAAGATGACGCCCTATAACACCTATCTGGTAAAAGGGCTGCCGCCGACGCCCATCGCCAATCCGGGGCGGGCG GCGCTGGAGGCTGTGGCCAATCCGTCGCGGACCGAGGAACTCTACTTCGTGGCCGATGGTAATGGCGGCCATGTCTTTGC TTCCTCGCTTGACGAGCACAATGAAAACGTAGCCCGCTGGCGCAAAATCGAGCGCGAGAGAGCCGCCGCTGCAGAGAAGG CCGCATCTGAGGTGCAGCCTGCGGCAGCGGAAGGCAGCGAAGTGGGCGAAAACTGA
Upstream 100 bases:
>100_bases TTTCGGCTTAGATGCCGGAAAAATGACGCTATTCTGCTGCAAATCGTGTAGATGATTCTGCAAACGAGAACATGTTGCTC GGTAGGGAGATCCGCCTGAC
Downstream 100 bases:
>100_bases CGAACGCTTTCGGGCGGAGCAGCGGGCGGCGGGAATGACGATACAGAGTATGACGGGCTTTGCCCGTGCCTCCCTGGCGG ATGAGATTATGTCCGTGAAT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTDRNDQPSRTFVFSSGRDALRPEAATPPPPKRSRQSRNQFIVFLNFVVSSIVFVLVVAGIAFYFGKSAFEGPGPSTTTQ TVLIKPNTGVREIASILESEGLISDARIFMIGLRVHGADSKLKAGEYEIKAGASMQDIMELLESGKSVLYSLTIPEGLTV AQVFERIAKTEELAGELPEELPPEGSLAADTLRFTRGLSRKEVVERLKAQQEELVQSIWQRRSEDLPIEDINAFLTLASI VEKETGRSDERSRVAAVFLNRLKRGMRLQSDPTVIYGIFGGQGKPAERPIYRSDLDKMTPYNTYLVKGLPPTPIANPGRA ALEAVANPSRTEELYFVADGNGGHVFASSLDEHNENVARWRKIERERAAAAEKAASEVQPAAAEGSEVGEN
Sequences:
>Translated_391_residues MTDRNDQPSRTFVFSSGRDALRPEAATPPPPKRSRQSRNQFIVFLNFVVSSIVFVLVVAGIAFYFGKSAFEGPGPSTTTQ TVLIKPNTGVREIASILESEGLISDARIFMIGLRVHGADSKLKAGEYEIKAGASMQDIMELLESGKSVLYSLTIPEGLTV AQVFERIAKTEELAGELPEELPPEGSLAADTLRFTRGLSRKEVVERLKAQQEELVQSIWQRRSEDLPIEDINAFLTLASI VEKETGRSDERSRVAAVFLNRLKRGMRLQSDPTVIYGIFGGQGKPAERPIYRSDLDKMTPYNTYLVKGLPPTPIANPGRA ALEAVANPSRTEELYFVADGNGGHVFASSLDEHNENVARWRKIERERAAAAEKAASEVQPAAAEGSEVGEN >Mature_390_residues TDRNDQPSRTFVFSSGRDALRPEAATPPPPKRSRQSRNQFIVFLNFVVSSIVFVLVVAGIAFYFGKSAFEGPGPSTTTQT VLIKPNTGVREIASILESEGLISDARIFMIGLRVHGADSKLKAGEYEIKAGASMQDIMELLESGKSVLYSLTIPEGLTVA QVFERIAKTEELAGELPEELPPEGSLAADTLRFTRGLSRKEVVERLKAQQEELVQSIWQRRSEDLPIEDINAFLTLASIV EKETGRSDERSRVAAVFLNRLKRGMRLQSDPTVIYGIFGGQGKPAERPIYRSDLDKMTPYNTYLVKGLPPTPIANPGRAA LEAVANPSRTEELYFVADGNGGHVFASSLDEHNENVARWRKIERERAAAAEKAASEVQPAAAEGSEVGEN
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=300, Percent_Identity=37.3333333333333, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 42878; Mature: 42747
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRNDQPSRTFVFSSGRDALRPEAATPPPPKRSRQSRNQFIVFLNFVVSSIVFVLVVAG CCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHH IAFYFGKSAFEGPGPSTTTQTVLIKPNTGVREIASILESEGLISDARIFMIGLRVHGADS HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCC KLKAGEYEIKAGASMQDIMELLESGKSVLYSLTIPEGLTVAQVFERIAKTEELAGELPEE CCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHH LPPEGSLAADTLRFTRGLSRKEVVERLKAQQEELVQSIWQRRSEDLPIEDINAFLTLASI CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VEKETGRSDERSRVAAVFLNRLKRGMRLQSDPTVIYGIFGGQGKPAERPIYRSDLDKMTP HHHHCCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC YNTYLVKGLPPTPIANPGRAALEAVANPSRTEELYFVADGNGGHVFASSLDEHNENVARW CCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHH RKIERERAAAAEKAASEVQPAAAEGSEVGEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDRNDQPSRTFVFSSGRDALRPEAATPPPPKRSRQSRNQFIVFLNFVVSSIVFVLVVAG CCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHH IAFYFGKSAFEGPGPSTTTQTVLIKPNTGVREIASILESEGLISDARIFMIGLRVHGADS HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCC KLKAGEYEIKAGASMQDIMELLESGKSVLYSLTIPEGLTVAQVFERIAKTEELAGELPEE CCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHH LPPEGSLAADTLRFTRGLSRKEVVERLKAQQEELVQSIWQRRSEDLPIEDINAFLTLASI CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VEKETGRSDERSRVAAVFLNRLKRGMRLQSDPTVIYGIFGGQGKPAERPIYRSDLDKMTP HHHHCCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC YNTYLVKGLPPTPIANPGRAALEAVANPSRTEELYFVADGNGGHVFASSLDEHNENVARW CCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHH RKIERERAAAAEKAASEVQPAAAEGSEVGEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]