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The map label for this gene is yloC [H]

Identifier: 110634115

GI number: 110634115

Start: 1885858

End: 1886745

Strand: Reverse

Name: yloC [H]

Synonym: Meso_1764

Alternate gene names: 110634115

Gene position: 1886745-1885858 (Counterclockwise)

Preceding gene: 110634116

Following gene: 110634114

Centisome position: 42.76

GC content: 63.29

Gene sequence:

>888_bases
ATGACGATACAGAGTATGACGGGCTTTGCCCGTGCCTCCCTGGCGGATGAGATTATGTCCGTGAATTGGGAATTGCGCTC
GGTGAACGGCAGAGGGCTGGAGCCGAAGCTGCGGCTGCCGACGGGACTTGAGCGCCTGGAGCAGCCGGCCAAGAGCCGCA
TCGCGAAGCGCTTCTCGCGCGGCAATATCCAGGCCAATCTTTTCGTCACACGCGGTGCCGCGCTGCGCCGGCCGGTGGTG
GACGAGGAACTCTTGGCGGAACTCGCGCGCCTGTCACGGCACCTCGTTGAGGAATATGGGGTCGCCCCTGCGCGGGCGGA
TGGCCTTCTGGCTCTGCGTGGAGTGATGGATCTGCCCGACACGGTTCTGGATGAAGAGACAGGCGAGCGGCTGGACGCAC
TGGCGCTTTCAGCGCTCGACCAGGCGCTGGACGAACTTGACGCCGCACGGCGCGAAGAAGGATCGTCGCTCACGGTGGTG
CTTCTCGACCACATCGCCGCCATAGAGGCGCTGACGCTCAAGGCGGAGGCGGACCCTTCTTGCGAGCCGGCGAGTATTCG
CCAGCGCCTGCAGGAGCAGGTAAGGCTTCTGCTTGATGCGGCACCGGCGCTCGATGAGGGGCGGCTGCTTCAGGAAGCCG
CCTTCCTGGCGACAAAGGCCGATATTCGCGAGGAGATCGACAGGCTGAAAACGCATGTCGCGGCCGCGCGAGCACTCATC
GAGGCGGGGGGACCGGTGGGGCGCAAGCTCGATTTCCTTGCGCAGGAATTCAACCGCGAATCGAATACACTCTGCTCCAA
GTCAAACGCCTCTTCCGTCACGGCGATCGGCCTTGAATTGAAGGCTGTCGTCGATCAGTTTCGGGAGCAGGTGCAGAATT
TGGAGTAG

Upstream 100 bases:

>100_bases
GCAGAGAAGGCCGCATCTGAGGTGCAGCCTGCGGCAGCGGAAGGCAGCGAAGTGGGCGAAAACTGACGAACGCTTTCGGG
CGGAGCAGCGGGCGGCGGGA

Downstream 100 bases:

>100_bases
CAATGGAATCCGCCTCGCCATCCGCCACGATCCGCCGCAGGGGAGTGATGCTGGTTCTCTCCTCGCCTTCGGGTGCCGGC
AAATCGACCATTGCAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTIQSMTGFARASLADEIMSVNWELRSVNGRGLEPKLRLPTGLERLEQPAKSRIAKRFSRGNIQANLFVTRGAALRRPVV
DEELLAELARLSRHLVEEYGVAPARADGLLALRGVMDLPDTVLDEETGERLDALALSALDQALDELDAARREEGSSLTVV
LLDHIAAIEALTLKAEADPSCEPASIRQRLQEQVRLLLDAAPALDEGRLLQEAAFLATKADIREEIDRLKTHVAAARALI
EAGGPVGRKLDFLAQEFNRESNTLCSKSNASSVTAIGLELKAVVDQFREQVQNLE

Sequences:

>Translated_295_residues
MTIQSMTGFARASLADEIMSVNWELRSVNGRGLEPKLRLPTGLERLEQPAKSRIAKRFSRGNIQANLFVTRGAALRRPVV
DEELLAELARLSRHLVEEYGVAPARADGLLALRGVMDLPDTVLDEETGERLDALALSALDQALDELDAARREEGSSLTVV
LLDHIAAIEALTLKAEADPSCEPASIRQRLQEQVRLLLDAAPALDEGRLLQEAAFLATKADIREEIDRLKTHVAAARALI
EAGGPVGRKLDFLAQEFNRESNTLCSKSNASSVTAIGLELKAVVDQFREQVQNLE
>Mature_294_residues
TIQSMTGFARASLADEIMSVNWELRSVNGRGLEPKLRLPTGLERLEQPAKSRIAKRFSRGNIQANLFVTRGAALRRPVVD
EELLAELARLSRHLVEEYGVAPARADGLLALRGVMDLPDTVLDEETGERLDALALSALDQALDELDAARREEGSSLTVVL
LDHIAAIEALTLKAEADPSCEPASIRQRLQEQVRLLLDAAPALDEGRLLQEAAFLATKADIREEIDRLKTHVAAARALIE
AGGPVGRKLDFLAQEFNRESNTLCSKSNASSVTAIGLELKAVVDQFREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=297, Percent_Identity=36.026936026936, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32260; Mature: 32129

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQSMTGFARASLADEIMSVNWELRSVNGRGLEPKLRLPTGLERLEQPAKSRIAKRFSR
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GNIQANLFVTRGAALRRPVVDEELLAELARLSRHLVEEYGVAPARADGLLALRGVMDLPD
CCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
TVLDEETGERLDALALSALDQALDELDAARREEGSSLTVVLLDHIAAIEALTLKAEADPS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCCC
CEPASIRQRLQEQVRLLLDAAPALDEGRLLQEAAFLATKADIREEIDRLKTHVAAARALI
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGGPVGRKLDFLAQEFNRESNTLCSKSNASSVTAIGLELKAVVDQFREQVQNLE
HCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIQSMTGFARASLADEIMSVNWELRSVNGRGLEPKLRLPTGLERLEQPAKSRIAKRFSR
CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GNIQANLFVTRGAALRRPVVDEELLAELARLSRHLVEEYGVAPARADGLLALRGVMDLPD
CCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
TVLDEETGERLDALALSALDQALDELDAARREEGSSLTVVLLDHIAAIEALTLKAEADPS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCCC
CEPASIRQRLQEQVRLLLDAAPALDEGRLLQEAAFLATKADIREEIDRLKTHVAAARALI
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGGPVGRKLDFLAQEFNRESNTLCSKSNASSVTAIGLELKAVVDQFREQVQNLE
HCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]