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The map label for this gene is dppC [H]

Identifier: 110633857

GI number: 110633857

Start: 1601813

End: 1602682

Strand: Reverse

Name: dppC [H]

Synonym: Meso_1504

Alternate gene names: 110633857

Gene position: 1602682-1601813 (Counterclockwise)

Preceding gene: 110633858

Following gene: 110633854

Centisome position: 36.32

GC content: 62.3

Gene sequence:

>870_bases
ATGAGCGCAGCTGTCGCCGCCCCGGCCAATACCGGATCCCGCAACCGCAGCTTCCTGCTGCGCGTCCTCTCACAGCGCAG
CGCGGTCATCGGCCTGGCGATCGTTCTGTTTTTTGTTGCCTTGGCGGTTTTTGCGCCGTGGATTGCGCCTTACGATCCCA
TCGCGTCCGACTGGCTCAGCGTCAGGCAGGCCCCATCCGCGGCGCACTGGATGGGAACCGATGACCTTGGACGTGACGTG
CTCACCCGTGTCATCTATGGAGCGCAGGCGTCGCTGTTGGCGGGGCTCATAGCCGTCAGCATCGCAATCCTGGCCGGTCT
GCCGCTCGGTCTCATCGCCGGATATTTCGGCGGCTGGGTCGACACGATCATCTCGCGCTGCACCGATGCGCTGCTGGCTT
GCCCGTTCTTGGTTCTGGCCATCGCGCTCGCCGCCTTTCTCGGCGCAAGCTTGCAAAACGCGATGATCGCCATCGGCATC
TCGGCGATGCCGATCTTCATACGTCTGGTCCGCGGTCAGGTCCTGACAATCAAGAATGAGGATTTCGTCACCGCCGCACG
CGGGCAAGGCATGCGCGACCGCTCGATCATCCTCTCGCATATCCTTCCAAATGTCGTCACGCCGGTTGTCGTTCAGGCTA
CGATCACGATGGCGGTCGCGATCCTCGCTGAAGCAAGCCTTGCCTTTCTTGGTCTGGGCCAGCGCCCGCCTGCAGCATCA
TGGGGCAGCATGCTCGATGTCGCCCGCCAGTTCATGCTGGACGCGCCGTGGATGTCGATCTGGCCCGGTCTCGCCATCGT
CACCATCGTGCTCGGCTTCAATCTGCTAGGTGACGGTCTTAACGACGCGTTAAACCAGAAGGACGACTGA

Upstream 100 bases:

>100_bases
CGGTCGTGCAGGCGGTGATCCTGTGCTCCGCCGCGATTTTCCTGATCCTGAGCCTGCTCGCCGATATCCTTTATGTGAAA
CTCAGCCCGAGGTTGCAGGC

Downstream 100 bases:

>100_bases
AGGCTGAAAGACTATCCTGCCGCGAGCCGTTCCAGAAAGCCGACAAGCGCCTAGCGCGGCTTAGAGCTTCTACTCTCAAC
GGCGGACCTGCGTAGCGGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAAVAAPANTGSRNRSFLLRVLSQRSAVIGLAIVLFFVALAVFAPWIAPYDPIASDWLSVRQAPSAAHWMGTDDLGRDV
LTRVIYGAQASLLAGLIAVSIAILAGLPLGLIAGYFGGWVDTIISRCTDALLACPFLVLAIALAAFLGASLQNAMIAIGI
SAMPIFIRLVRGQVLTIKNEDFVTAARGQGMRDRSIILSHILPNVVTPVVVQATITMAVAILAEASLAFLGLGQRPPAAS
WGSMLDVARQFMLDAPWMSIWPGLAIVTIVLGFNLLGDGLNDALNQKDD

Sequences:

>Translated_289_residues
MSAAVAAPANTGSRNRSFLLRVLSQRSAVIGLAIVLFFVALAVFAPWIAPYDPIASDWLSVRQAPSAAHWMGTDDLGRDV
LTRVIYGAQASLLAGLIAVSIAILAGLPLGLIAGYFGGWVDTIISRCTDALLACPFLVLAIALAAFLGASLQNAMIAIGI
SAMPIFIRLVRGQVLTIKNEDFVTAARGQGMRDRSIILSHILPNVVTPVVVQATITMAVAILAEASLAFLGLGQRPPAAS
WGSMLDVARQFMLDAPWMSIWPGLAIVTIVLGFNLLGDGLNDALNQKDD
>Mature_288_residues
SAAVAAPANTGSRNRSFLLRVLSQRSAVIGLAIVLFFVALAVFAPWIAPYDPIASDWLSVRQAPSAAHWMGTDDLGRDVL
TRVIYGAQASLLAGLIAVSIAILAGLPLGLIAGYFGGWVDTIISRCTDALLACPFLVLAIALAAFLGASLQNAMIAIGIS
AMPIFIRLVRGQVLTIKNEDFVTAARGQGMRDRSIILSHILPNVVTPVVVQATITMAVAILAEASLAFLGLGQRPPAASW
GSMLDVARQFMLDAPWMSIWPGLAIVTIVLGFNLLGDGLNDALNQKDD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=45.7875457875458, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=45.2755905511811, Blast_Score=219, Evalue=1e-58,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=47.6377952755905, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=35.9259259259259, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=36.0995850622407, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=35.1449275362319, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30459; Mature: 30328

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAVAAPANTGSRNRSFLLRVLSQRSAVIGLAIVLFFVALAVFAPWIAPYDPIASDWLS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRQAPSAAHWMGTDDLGRDVLTRVIYGAQASLLAGLIAVSIAILAGLPLGLIAGYFGGWV
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DTIISRCTDALLACPFLVLAIALAAFLGASLQNAMIAIGISAMPIFIRLVRGQVLTIKNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
DFVTAARGQGMRDRSIILSHILPNVVTPVVVQATITMAVAILAEASLAFLGLGQRPPAAS
CCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
WGSMLDVARQFMLDAPWMSIWPGLAIVTIVLGFNLLGDGLNDALNQKDD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure 
SAAVAAPANTGSRNRSFLLRVLSQRSAVIGLAIVLFFVALAVFAPWIAPYDPIASDWLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRQAPSAAHWMGTDDLGRDVLTRVIYGAQASLLAGLIAVSIAILAGLPLGLIAGYFGGWV
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DTIISRCTDALLACPFLVLAIALAAFLGASLQNAMIAIGISAMPIFIRLVRGQVLTIKNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
DFVTAARGQGMRDRSIILSHILPNVVTPVVVQATITMAVAILAEASLAFLGLGQRPPAAS
CCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
WGSMLDVARQFMLDAPWMSIWPGLAIVTIVLGFNLLGDGLNDALNQKDD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]