| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is coaD
Identifier: 110633755
GI number: 110633755
Start: 1499418
End: 1499918
Strand: Direct
Name: coaD
Synonym: Meso_1402
Alternate gene names: 110633755
Gene position: 1499418-1499918 (Clockwise)
Preceding gene: 110633754
Following gene: 110633756
Centisome position: 33.98
GC content: 62.08
Gene sequence:
>501_bases ATGACTGATCGCACCGCCTTTTATGCCGGCTCCTTCGATCCGCTTACCAACGGCCACCTCGACGTTCTGAAGGGGGCGTT GGAACTTGCTGATACCGTGGTGATCGGCATCGGCATTCACCCGGGCAAAAAGCCGCTCTTTTCGTATGGCGAGCGCGTTG CCCTGATCGAGCGCTCGGCCAAGGATGAGCTGGGCGCCGATGGCGGCCGCATCAAGGTGGTGGCTTTCGATAATCTGGTC ATCGATGCTGCGCGCGTCCACGGTGCTTCGATCATGATCCGCGGCCTGCGTGACGGCACGGACCTCGACTACGAGATGCA GATGGCGGGCATGAACCAGACCATGGCGCCGGAGCTGCTCACGGTTTTTCTGCCGGCGAGCCCATCGGTCCGCACCGTCA CGGCTACGCTCGTGCGGCAGATCGCATCCATGGGCGGCAATGTCGCGCCTTTCGTGCCGGCCGTCGTGGCGGCGGCCCTG AAAGAAAAATTTTCAGCCTAA
Upstream 100 bases:
>100_bases CGGCACCTGTCTCATCAGTGGCGGACTGTGGCTTGCGCTCTCGAGGCGATAAGCCGAGAAGCGAATTGCCTTCCCTTGAT AGGAGCGTTAGAAGCCGCCC
Downstream 100 bases:
>100_bases CCGGGAGAGATTTGATGCGCCCTTTTTCTCGCTTTGCACCTCTTTGCGTTGCCGCCGTTTTGGCCTTCGGCTCCGCCGCA CTTGCCGCGGAACCCGAAAA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTDRTAFYAGSFDPLTNGHLDVLKGALELADTVVIGIGIHPGKKPLFSYGERVALIERSAKDELGADGGRIKVVAFDNLV IDAARVHGASIMIRGLRDGTDLDYEMQMAGMNQTMAPELLTVFLPASPSVRTVTATLVRQIASMGGNVAPFVPAVVAAAL KEKFSA
Sequences:
>Translated_166_residues MTDRTAFYAGSFDPLTNGHLDVLKGALELADTVVIGIGIHPGKKPLFSYGERVALIERSAKDELGADGGRIKVVAFDNLV IDAARVHGASIMIRGLRDGTDLDYEMQMAGMNQTMAPELLTVFLPASPSVRTVTATLVRQIASMGGNVAPFVPAVVAAAL KEKFSA >Mature_165_residues TDRTAFYAGSFDPLTNGHLDVLKGALELADTVVIGIGIHPGKKPLFSYGERVALIERSAKDELGADGGRIKVVAFDNLVI DAARVHGASIMIRGLRDGTDLDYEMQMAGMNQTMAPELLTVFLPASPSVRTVTATLVRQIASMGGNVAPFVPAVVAAALK EKFSA
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=163, Percent_Identity=39.8773006134969, Blast_Score=133, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_MESSB (Q11IH7)
Other databases:
- EMBL: CP000390 - RefSeq: YP_673963.1 - ProteinModelPortal: Q11IH7 - SMR: Q11IH7 - STRING: Q11IH7 - GeneID: 4180994 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_1402 - NMPDR: fig|266779.1.peg.2190 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: MSP266779:MESO_1402-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17558; Mature: 17426
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRTAFYAGSFDPLTNGHLDVLKGALELADTVVIGIGIHPGKKPLFSYGERVALIERSA CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCEEEEHHHCC KDELGADGGRIKVVAFDNLVIDAARVHGASIMIRGLRDGTDLDYEMQMAGMNQTMAPELL HHHCCCCCCEEEEEEECCEEEEHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEE TVFLPASPSVRTVTATLVRQIASMGGNVAPFVPAVVAAALKEKFSA EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDRTAFYAGSFDPLTNGHLDVLKGALELADTVVIGIGIHPGKKPLFSYGERVALIERSA CCCCEEEECCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCEEEEHHHCC KDELGADGGRIKVVAFDNLVIDAARVHGASIMIRGLRDGTDLDYEMQMAGMNQTMAPELL HHHCCCCCCEEEEEEECCEEEEHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEE TVFLPASPSVRTVTATLVRQIASMGGNVAPFVPAVVAAALKEKFSA EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA