BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is gabD [H]

Identifier: 110633676

GI number: 110633676

Start: 1413188

End: 1414645

Strand: Direct

Name: gabD [H]

Synonym: Meso_1323

Alternate gene names: 110633676

Gene position: 1413188-1414645 (Clockwise)

Preceding gene: 110633675

Following gene: 110633678

Centisome position: 32.03

GC content: 60.77

Gene sequence:

>1458_bases
ATGCTCAAGAAGACCAGTCATTTCCTTCGTGAAGCGAATTTCATCGCAGGCGAGTGGGTAAACGCGGACTCGGGCGCGAC
GATCGAGGTTATCAATCCCGCCACCCGGCAGACGATCGGCACGGTGCCGAAATGCGGCCGGGCCGAGACGCGCCGCGCCA
TCGAGGCGGCGCAGGAGGCATTCCAGTCCTGGAAGAAAACTTCGGCCAACGATCGCGCCAAGCTTCTGCGCAAGCTGCAC
GATGCCATCATGGACAATCAGGACGCGCTTGCCGAGCTTCTCGTGATGGAGCAGGGAAAGCCCCTTGCAGAGGCCAAGGG
GGAGGTCGGCACATCTGCGGCATACATACTCTGGTTCGCAGAGGAGGGGAGACGCATCTATGGCGACATCGTGCCCGCCC
CCTGGACGGACCGGCGCATCCTGGTGACCAAGGAGCCTGTCGGCGTGATTGGCGCCATCACCCCTTGGAACTTCCCGTCC
TCCATGCTGGCGCGTAAGCTCGGCCCGGCGCTCGCGGCCGGCTGCACGACGGTAGCCAAGCCTGCATCGCAGACTCCCTA
TTCGGGCCTTGCCTGGGGCGTATTGGCCGAGGAAGCCGGATTCCCCAAAGGCGTGGTGAACATCGTTACCGGCTCGGCAT
CTGAAATCGGCGATGAACTCACCGAAAACCCGCTTGTGCGCAAGATCACCTTCACCGGTTCGACCGAAATCGGCAAGCTT
CTCATGGAGAAGGCCGCGGGCACGGTGAAGAAGGTGTCGATGGAACTGGGAGGCAATGCGCCATTTCTGGTTTTCGACGA
CGCGGATCTGGACCGGGCGGTGAAAGGCGCGATGATCGCCAAATACCGCAATGCGGGACAGACCTGCGTGTGCACGAACC
GCTTCTTCGTTCAGGACGGCATCTATGATCGCTTCCTCGAGAAATTCGTCGAAGCATCCCGGAAGCTGAAAGTCGGCTCC
GGGCTTGACGAAGGCGTGGAGCAGGGACCGCTGATCGATGGCGGTGCCGTCGAGAAGGTGGAGGAGCTGATCGCCGATGC
GGTCAGCAAGGGTGGCAAGGTTGTCACTGGCGGCAAGCGCCATGCGTTGGGCGGCAGCTATTTCGAGCCGACCGTCATCG
CTGAAGCAACGCCCCAGATGCGCTTCATGGAAGAGGAAATCTTCGGTCCCGTTGCCCCTGTTTTCCGCTTCAAGGACGAA
GCGGACGGCATTCGGATGGCGAATGACACATCCTTCGGCCTTGCCTGCTATTTCTATACCAGCGACCTTGGCCGCGCCTT
CCGTGTGATGGAAGGGCTGAAATATGGTCTGGTGGGAGTGAACGAAGGCTTGATCACGACGGTTGAAGCGCCCTTCGGCG
GGCTGAAGGAGTCAGGCCTTGGCAAGGAAGGCGGGCGCCAGGGTATCGAGGACTATCTCGATACCAAATATGTCTGCATC
GGCGGCTTGGGGCTTTAA

Upstream 100 bases:

>100_bases
ATCGTGGCGATCTGCTTGAACCAGCCGCGAATCTTCCCACCTTCGGATATGAGTCCGATCTTTCCGGCCAGAAAGGCGCG
CAGCGCGCCAAGGAGGACCA

Downstream 100 bases:

>100_bases
CTCCAAACCAGTCCGGCTGGCTTCCGAAGGCCTGTCGTAGCACTTCGAACGGAGCGAGAGCCCCAGGAACCTGGACAACC
GCCGCGGCCACATTGTGGGC

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MLKKTSHFLREANFIAGEWVNADSGATIEVINPATRQTIGTVPKCGRAETRRAIEAAQEAFQSWKKTSANDRAKLLRKLH
DAIMDNQDALAELLVMEQGKPLAEAKGEVGTSAAYILWFAEEGRRIYGDIVPAPWTDRRILVTKEPVGVIGAITPWNFPS
SMLARKLGPALAAGCTTVAKPASQTPYSGLAWGVLAEEAGFPKGVVNIVTGSASEIGDELTENPLVRKITFTGSTEIGKL
LMEKAAGTVKKVSMELGGNAPFLVFDDADLDRAVKGAMIAKYRNAGQTCVCTNRFFVQDGIYDRFLEKFVEASRKLKVGS
GLDEGVEQGPLIDGGAVEKVEELIADAVSKGGKVVTGGKRHALGGSYFEPTVIAEATPQMRFMEEEIFGPVAPVFRFKDE
ADGIRMANDTSFGLACYFYTSDLGRAFRVMEGLKYGLVGVNEGLITTVEAPFGGLKESGLGKEGGRQGIEDYLDTKYVCI
GGLGL

Sequences:

>Translated_485_residues
MLKKTSHFLREANFIAGEWVNADSGATIEVINPATRQTIGTVPKCGRAETRRAIEAAQEAFQSWKKTSANDRAKLLRKLH
DAIMDNQDALAELLVMEQGKPLAEAKGEVGTSAAYILWFAEEGRRIYGDIVPAPWTDRRILVTKEPVGVIGAITPWNFPS
SMLARKLGPALAAGCTTVAKPASQTPYSGLAWGVLAEEAGFPKGVVNIVTGSASEIGDELTENPLVRKITFTGSTEIGKL
LMEKAAGTVKKVSMELGGNAPFLVFDDADLDRAVKGAMIAKYRNAGQTCVCTNRFFVQDGIYDRFLEKFVEASRKLKVGS
GLDEGVEQGPLIDGGAVEKVEELIADAVSKGGKVVTGGKRHALGGSYFEPTVIAEATPQMRFMEEEIFGPVAPVFRFKDE
ADGIRMANDTSFGLACYFYTSDLGRAFRVMEGLKYGLVGVNEGLITTVEAPFGGLKESGLGKEGGRQGIEDYLDTKYVCI
GGLGL
>Mature_485_residues
MLKKTSHFLREANFIAGEWVNADSGATIEVINPATRQTIGTVPKCGRAETRRAIEAAQEAFQSWKKTSANDRAKLLRKLH
DAIMDNQDALAELLVMEQGKPLAEAKGEVGTSAAYILWFAEEGRRIYGDIVPAPWTDRRILVTKEPVGVIGAITPWNFPS
SMLARKLGPALAAGCTTVAKPASQTPYSGLAWGVLAEEAGFPKGVVNIVTGSASEIGDELTENPLVRKITFTGSTEIGKL
LMEKAAGTVKKVSMELGGNAPFLVFDDADLDRAVKGAMIAKYRNAGQTCVCTNRFFVQDGIYDRFLEKFVEASRKLKVGS
GLDEGVEQGPLIDGGAVEKVEELIADAVSKGGKVVTGGKRHALGGSYFEPTVIAEATPQMRFMEEEIFGPVAPVFRFKDE
ADGIRMANDTSFGLACYFYTSDLGRAFRVMEGLKYGLVGVNEGLITTVEAPFGGLKESGLGKEGGRQGIEDYLDTKYVCI
GGLGL

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=483, Percent_Identity=53.8302277432712, Blast_Score=509, Evalue=1e-144,
Organism=Homo sapiens, GI25777721, Length=496, Percent_Identity=52.2177419354839, Blast_Score=498, Evalue=1e-141,
Organism=Homo sapiens, GI153266822, Length=477, Percent_Identity=40.6708595387841, Blast_Score=340, Evalue=2e-93,
Organism=Homo sapiens, GI25777724, Length=476, Percent_Identity=39.4957983193277, Blast_Score=335, Evalue=4e-92,
Organism=Homo sapiens, GI25777730, Length=473, Percent_Identity=40.169133192389, Blast_Score=333, Evalue=2e-91,
Organism=Homo sapiens, GI21614513, Length=474, Percent_Identity=40.9282700421941, Blast_Score=322, Evalue=7e-88,
Organism=Homo sapiens, GI21361176, Length=472, Percent_Identity=38.3474576271186, Blast_Score=320, Evalue=2e-87,
Organism=Homo sapiens, GI238814322, Length=476, Percent_Identity=38.655462184874, Blast_Score=317, Evalue=2e-86,
Organism=Homo sapiens, GI12007648, Length=484, Percent_Identity=35.3305785123967, Blast_Score=301, Evalue=8e-82,
Organism=Homo sapiens, GI25777732, Length=472, Percent_Identity=37.2881355932203, Blast_Score=299, Evalue=3e-81,
Organism=Homo sapiens, GI25777728, Length=418, Percent_Identity=40.1913875598086, Blast_Score=298, Evalue=9e-81,
Organism=Homo sapiens, GI115387104, Length=470, Percent_Identity=35.9574468085106, Blast_Score=295, Evalue=6e-80,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=35.7142857142857, Blast_Score=285, Evalue=7e-77,
Organism=Homo sapiens, GI25952152, Length=477, Percent_Identity=29.979035639413, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI11095441, Length=472, Percent_Identity=28.3898305084746, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI188035924, Length=477, Percent_Identity=30.188679245283, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI310128093, Length=476, Percent_Identity=30.4621848739496, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI310128103, Length=477, Percent_Identity=30.188679245283, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI301500698, Length=281, Percent_Identity=37.7224199288256, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI310128091, Length=476, Percent_Identity=28.9915966386555, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI223972651, Length=464, Percent_Identity=28.0172413793103, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI206597441, Length=440, Percent_Identity=26.8181818181818, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI206597439, Length=440, Percent_Identity=26.8181818181818, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI22907049, Length=440, Percent_Identity=26.8181818181818, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI310128089, Length=325, Percent_Identity=30.4615384615385, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI310128097, Length=259, Percent_Identity=33.2046332046332, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI73466520, Length=333, Percent_Identity=26.1261261261261, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI4557303, Length=333, Percent_Identity=26.1261261261261, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI73695881, Length=350, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI73695879, Length=350, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI4502043, Length=423, Percent_Identity=27.1867612293144, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI238814371, Length=423, Percent_Identity=27.1867612293144, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI71773324, Length=336, Percent_Identity=28.2738095238095, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI310128095, Length=282, Percent_Identity=30.4964539007092, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI25777736, Length=442, Percent_Identity=27.1493212669683, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI25777734, Length=442, Percent_Identity=27.1493212669683, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI238859541, Length=443, Percent_Identity=27.0880361173815, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI223972653, Length=465, Percent_Identity=25.1612903225806, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310128087, Length=297, Percent_Identity=29.2929292929293, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI310128099, Length=237, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI310128101, Length=237, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=5e-17,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=59.4594594594595, Blast_Score=610, Evalue=1e-176,
Organism=Escherichia coli, GI1787684, Length=468, Percent_Identity=38.4615384615385, Blast_Score=338, Evalue=5e-94,
Organism=Escherichia coli, GI1787715, Length=474, Percent_Identity=37.5527426160338, Blast_Score=293, Evalue=1e-80,
Organism=Escherichia coli, GI87081896, Length=490, Percent_Identity=33.8775510204082, Blast_Score=292, Evalue=4e-80,
Organism=Escherichia coli, GI1787558, Length=472, Percent_Identity=34.3220338983051, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI87082295, Length=485, Percent_Identity=34.639175257732, Blast_Score=274, Evalue=9e-75,
Organism=Escherichia coli, GI1786504, Length=481, Percent_Identity=34.7193347193347, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=31.6964285714286, Blast_Score=255, Evalue=5e-69,
Organism=Escherichia coli, GI1788042, Length=453, Percent_Identity=29.3598233995585, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1787250, Length=459, Percent_Identity=28.322440087146, Blast_Score=156, Evalue=3e-39,
Organism=Escherichia coli, GI1787653, Length=305, Percent_Identity=25.5737704918033, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534119, Length=471, Percent_Identity=46.072186836518, Blast_Score=418, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI133930964, Length=477, Percent_Identity=41.7190775681342, Blast_Score=345, Evalue=4e-95,
Organism=Caenorhabditis elegans, GI17562198, Length=485, Percent_Identity=40.2061855670103, Blast_Score=329, Evalue=3e-90,
Organism=Caenorhabditis elegans, GI25144435, Length=472, Percent_Identity=39.8305084745763, Blast_Score=327, Evalue=6e-90,
Organism=Caenorhabditis elegans, GI32564736, Length=414, Percent_Identity=40.3381642512077, Blast_Score=291, Evalue=7e-79,
Organism=Caenorhabditis elegans, GI25143876, Length=485, Percent_Identity=34.020618556701, Blast_Score=279, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI25143874, Length=485, Percent_Identity=34.020618556701, Blast_Score=279, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI71995606, Length=476, Percent_Identity=36.9747899159664, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17551164, Length=482, Percent_Identity=35.4771784232365, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=37.2596153846154, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI115534176, Length=485, Percent_Identity=30.3092783505155, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI71986308, Length=473, Percent_Identity=30.2325581395349, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI25146391, Length=445, Percent_Identity=28.0898876404494, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25146394, Length=445, Percent_Identity=28.0898876404494, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI32566756, Length=445, Percent_Identity=28.0898876404494, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17564084, Length=436, Percent_Identity=27.2935779816514, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17534447, Length=462, Percent_Identity=25.5411255411255, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=333, Percent_Identity=27.9279279279279, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI32564151, Length=419, Percent_Identity=25.7756563245823, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71990744, Length=307, Percent_Identity=24.4299674267101, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=480, Percent_Identity=43.9583333333333, Blast_Score=434, Evalue=1e-122,
Organism=Saccharomyces cerevisiae, GI6320917, Length=469, Percent_Identity=40.0852878464819, Blast_Score=342, Evalue=6e-95,
Organism=Saccharomyces cerevisiae, GI6324950, Length=467, Percent_Identity=35.7601713062098, Blast_Score=308, Evalue=2e-84,
Organism=Saccharomyces cerevisiae, GI6323822, Length=479, Percent_Identity=36.5344467640919, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6325196, Length=471, Percent_Identity=35.4564755838641, Blast_Score=289, Evalue=9e-79,
Organism=Saccharomyces cerevisiae, GI6323821, Length=478, Percent_Identity=34.7280334728033, Blast_Score=285, Evalue=1e-77,
Organism=Saccharomyces cerevisiae, GI6321828, Length=492, Percent_Identity=28.6585365853659, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6321826, Length=504, Percent_Identity=24.6031746031746, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=401, Percent_Identity=25.6857855361596, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI281362580, Length=487, Percent_Identity=47.8439425051335, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI62472918, Length=487, Percent_Identity=47.8439425051335, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI62472926, Length=487, Percent_Identity=47.8439425051335, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI62472936, Length=487, Percent_Identity=47.8439425051335, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI21356737, Length=487, Percent_Identity=47.8439425051335, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI24650465, Length=472, Percent_Identity=40.6779661016949, Blast_Score=343, Evalue=1e-94,
Organism=Drosophila melanogaster, GI20129399, Length=484, Percent_Identity=38.2231404958678, Blast_Score=324, Evalue=1e-88,
Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=36.7647058823529, Blast_Score=311, Evalue=6e-85,
Organism=Drosophila melanogaster, GI24638876, Length=473, Percent_Identity=29.5983086680761, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI24638878, Length=473, Percent_Identity=29.5983086680761, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24666674, Length=480, Percent_Identity=27.9166666666667, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI281360299, Length=450, Percent_Identity=26.4444444444444, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360297, Length=450, Percent_Identity=26.4444444444444, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360295, Length=450, Percent_Identity=26.4444444444444, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24586250, Length=450, Percent_Identity=26.4444444444444, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360301, Length=450, Percent_Identity=26.4444444444444, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI45552499, Length=452, Percent_Identity=26.7699115044248, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360303, Length=452, Percent_Identity=26.7699115044248, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24668425, Length=436, Percent_Identity=26.1467889908257, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668417, Length=436, Percent_Identity=26.1467889908257, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668413, Length=436, Percent_Identity=26.1467889908257, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28574525, Length=461, Percent_Identity=22.3427331887202, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571806, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571802, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571800, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571798, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571796, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571794, Length=462, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281360293, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52112; Mature: 52112

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKTSHFLREANFIAGEWVNADSGATIEVINPATRQTIGTVPKCGRAETRRAIEAAQEA
CCCHHHHHHHHCCCCCCCEECCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHH
FQSWKKTSANDRAKLLRKLHDAIMDNQDALAELLVMEQGKPLAEAKGEVGTSAAYILWFA
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEE
EEGRRIYGDIVPAPWTDRRILVTKEPVGVIGAITPWNFPSSMLARKLGPALAAGCTTVAK
CCCCEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCHHHHHCHHHHCC
PASQTPYSGLAWGVLAEEAGFPKGVVNIVTGSASEIGDELTENPLVRKITFTGSTEIGKL
CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHH
LMEKAAGTVKKVSMELGGNAPFLVFDDADLDRAVKGAMIAKYRNAGQTCVCTNRFFVQDG
HHHHHCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCC
IYDRFLEKFVEASRKLKVGSGLDEGVEQGPLIDGGAVEKVEELIADAVSKGGKVVTGGKR
HHHHHHHHHHHHHHCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC
HALGGSYFEPTVIAEATPQMRFMEEEIFGPVAPVFRFKDEADGIRMANDTSFGLACYFYT
CCCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCEEEEEEH
SDLGRAFRVMEGLKYGLVGVNEGLITTVEAPFGGLKESGLGKEGGRQGIEDYLDTKYVCI
HHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
GGLGL
ECCCC
>Mature Secondary Structure
MLKKTSHFLREANFIAGEWVNADSGATIEVINPATRQTIGTVPKCGRAETRRAIEAAQEA
CCCHHHHHHHHCCCCCCCEECCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHH
FQSWKKTSANDRAKLLRKLHDAIMDNQDALAELLVMEQGKPLAEAKGEVGTSAAYILWFA
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEE
EEGRRIYGDIVPAPWTDRRILVTKEPVGVIGAITPWNFPSSMLARKLGPALAAGCTTVAK
CCCCEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCHHHHHCHHHHCC
PASQTPYSGLAWGVLAEEAGFPKGVVNIVTGSASEIGDELTENPLVRKITFTGSTEIGKL
CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHH
LMEKAAGTVKKVSMELGGNAPFLVFDDADLDRAVKGAMIAKYRNAGQTCVCTNRFFVQDG
HHHHHCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCC
IYDRFLEKFVEASRKLKVGSGLDEGVEQGPLIDGGAVEKVEELIADAVSKGGKVVTGGKR
HHHHHHHHHHHHHHCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC
HALGGSYFEPTVIAEATPQMRFMEEEIFGPVAPVFRFKDEADGIRMANDTSFGLACYFYT
CCCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCEEEEEEH
SDLGRAFRVMEGLKYGLVGVNEGLITTVEAPFGGLKESGLGKEGGRQGIEDYLDTKYVCI
HHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
GGLGL
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]