Click here to switch to the map view.

The map label for this gene is 110633675

Identifier: 110633675

GI number: 110633675

Start: 1412050

End: 1413024

Strand: Direct

Name: 110633675

Synonym: Meso_1322

Alternate gene names: NA

Gene position: 1412050-1413024 (Clockwise)

Preceding gene: 110633669

Following gene: 110633676

Centisome position: 32.0

GC content: 59.9

Gene sequence:

>975_bases
ATGTGGAGTGGCCTAAAGCAAAGGCGGATGTCGCCTCTTTTCGAAACAATCGCGTTCGTTTTCGCGCTGGTTGCCCTTGG
TTATGTGAGCGGATGGTCTGGTTACCTGAGGAAGGAAACCGGAGCGGGCCTGAGCGACTTCGCCATATCCGTGGGCGTGC
CGCTGCTCCTGTTCCGTACCATGGCGCAAGCCGATTTCACGGGCGGGCTGCCGCTGCGCCTGTGGGTCACCTATTTCGGG
GCTGCTACGGTCACATGGGTGGTGGCGCAGCTCACGGTCGTCTACATATTCGGCCGCGATAGCCGCGCCGGGGTGGTGGG
GGGCTTGTCCGGCAGTTTTTCCAATCTCGCCCTGCTCGGAGTTCCCTTTGTCCTTGGCATCTTCGGGCATGAGGGATTCG
AAGTTCTCTCCCTCATCATTGCGGTCCATTTGCCGCTTATGATGGGGGCGACCATAGCCATGCTGGCATGGTTCGGCGGC
AAAGGGGCGCCTCAGGGCATAAAGGCCATTCTGCGGGATTTCGTCTATAATCTCGTAACAAACCCGCTTGTTATCGGCAT
AGCCGCTGGCCTCCTATGGCGCTTCACCGGGCTTGAGATGCCTTCGCTTGCCTCGCGGCTTGTCGACGCGCTCGCCAATG
TTGCCGCGCCGGTCGCTCTTTTCGCCATGGGGCTTGGCCTGTTGCATTACGGTGTGAGCGGCAATGTGCGGCCGGCGATC
GCACTTTCCTTCCTCAAGCTATTTCTGATGCCGGCCCTGGCGCTGGTGGCAGTAAAATTGATTGGCCTCACCGGCATCAG
TGCAAAGGTAGCGGTAACCGCGGCTTCGATGCCGTCAGGCATGAATCCATATCTCATTGCGATGCGTTTTGGCACCGGCC
AGGGGCTCGCGTCGAATTCCATGTGCATCAGCACGGCCCTGGCGGTCGTCACCACTGCCTTCTGGGTCGCGGTGGTACAG
TGGGTGTTCGGATGA

Upstream 100 bases:

>100_bases
TCATCAAGTTCTCTCTTGCGGTTCACCCCTTATAACGTTCCATGCCCGTTTCCGGAAATGGGATGCCCCGGCCCGCGTTC
CTGGCGCGGGTTGCGCGGTC

Downstream 100 bases:

>100_bases
AGGTGCGCTACCGCTACCCACTGTTCCTGGCTCTATCTCAGCGCCCAATTGGCTCATGAAACGATCGTGGCGATCTGCTT
GAACCAGCCGCGAATCTTCC

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MWSGLKQRRMSPLFETIAFVFALVALGYVSGWSGYLRKETGAGLSDFAISVGVPLLLFRTMAQADFTGGLPLRLWVTYFG
AATVTWVVAQLTVVYIFGRDSRAGVVGGLSGSFSNLALLGVPFVLGIFGHEGFEVLSLIIAVHLPLMMGATIAMLAWFGG
KGAPQGIKAILRDFVYNLVTNPLVIGIAAGLLWRFTGLEMPSLASRLVDALANVAAPVALFAMGLGLLHYGVSGNVRPAI
ALSFLKLFLMPALALVAVKLIGLTGISAKVAVTAASMPSGMNPYLIAMRFGTGQGLASNSMCISTALAVVTTAFWVAVVQ
WVFG

Sequences:

>Translated_324_residues
MWSGLKQRRMSPLFETIAFVFALVALGYVSGWSGYLRKETGAGLSDFAISVGVPLLLFRTMAQADFTGGLPLRLWVTYFG
AATVTWVVAQLTVVYIFGRDSRAGVVGGLSGSFSNLALLGVPFVLGIFGHEGFEVLSLIIAVHLPLMMGATIAMLAWFGG
KGAPQGIKAILRDFVYNLVTNPLVIGIAAGLLWRFTGLEMPSLASRLVDALANVAAPVALFAMGLGLLHYGVSGNVRPAI
ALSFLKLFLMPALALVAVKLIGLTGISAKVAVTAASMPSGMNPYLIAMRFGTGQGLASNSMCISTALAVVTTAFWVAVVQ
WVFG
>Mature_324_residues
MWSGLKQRRMSPLFETIAFVFALVALGYVSGWSGYLRKETGAGLSDFAISVGVPLLLFRTMAQADFTGGLPLRLWVTYFG
AATVTWVVAQLTVVYIFGRDSRAGVVGGLSGSFSNLALLGVPFVLGIFGHEGFEVLSLIIAVHLPLMMGATIAMLAWFGG
KGAPQGIKAILRDFVYNLVTNPLVIGIAAGLLWRFTGLEMPSLASRLVDALANVAAPVALFAMGLGLLHYGVSGNVRPAI
ALSFLKLFLMPALALVAVKLIGLTGISAKVAVTAASMPSGMNPYLIAMRFGTGQGLASNSMCISTALAVVTTAFWVAVVQ
WVFG

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34083; Mature: 34083

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSGLKQRRMSPLFETIAFVFALVALGYVSGWSGYLRKETGAGLSDFAISVGVPLLLFRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MAQADFTGGLPLRLWVTYFGAATVTWVVAQLTVVYIFGRDSRAGVVGGLSGSFSNLALLG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCHHHHHHHH
VPFVLGIFGHEGFEVLSLIIAVHLPLMMGATIAMLAWFGGKGAPQGIKAILRDFVYNLVT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NPLVIGIAAGLLWRFTGLEMPSLASRLVDALANVAAPVALFAMGLGLLHYGVSGNVRPAI
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALSFLKLFLMPALALVAVKLIGLTGISAKVAVTAASMPSGMNPYLIAMRFGTGQGLASNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEECCCCCCCCCH
MCISTALAVVTTAFWVAVVQWVFG
HHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MWSGLKQRRMSPLFETIAFVFALVALGYVSGWSGYLRKETGAGLSDFAISVGVPLLLFRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MAQADFTGGLPLRLWVTYFGAATVTWVVAQLTVVYIFGRDSRAGVVGGLSGSFSNLALLG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCHHHHHHHH
VPFVLGIFGHEGFEVLSLIIAVHLPLMMGATIAMLAWFGGKGAPQGIKAILRDFVYNLVT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NPLVIGIAAGLLWRFTGLEMPSLASRLVDALANVAAPVALFAMGLGLLHYGVSGNVRPAI
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALSFLKLFLMPALALVAVKLIGLTGISAKVAVTAASMPSGMNPYLIAMRFGTGQGLASNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEECCCCCCCCCH
MCISTALAVVTTAFWVAVVQWVFG
HHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]