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The map label for this gene is yddS [H]

Identifier: 110633493

GI number: 110633493

Start: 1246388

End: 1247605

Strand: Direct

Name: yddS [H]

Synonym: Meso_1140

Alternate gene names: 110633493

Gene position: 1246388-1247605 (Clockwise)

Preceding gene: 110633492

Following gene: 110633494

Centisome position: 28.25

GC content: 62.48

Gene sequence:

>1218_bases
GTGACGGCTGAAGCGCTTTATCGTGAGGCGAAACGCACCGCGCTGATTCTCGCGGCTGCACAAGCGGTCGTCGGTGCGTC
GGCACCCATAGCGATATCCATGGGCAGCCTCGCGGGAAGCTATCTGCTCGGCTCCGACAAGTCGCTCGCCACCGCGCCCC
TCACCGGGTTCAACATCGGGGTCGCCCTTGCGACTCTTCCGGCAGCGATGCTTGCCGGGACGTTCGGCCGCCGGAACAGC
TTCATTTCGGGCACCGGCGTTACCGCCATAGGAGGCGTCATCGCAGTAGTGGCATTGTTCCAGGCCAATTTTTGGCTTTT
TGCCCTCGGTCTTCTGCTCGTGGGCGGTGGCAATGCGTTTCTTCAGCAATACCGCTTTGCGGCAGCCGACAATGCCCCGG
CGGACTTCAAGCCGCGCGCCATTTCCTGGGTGCTTGGGGGAGGGGTGATCTCCGCCATTCTGGGGCCGCAGGTGGCAATC
CACACGCGCGAACTCTTTGCGCCGGTGATGTTCGCCGGCGCTTTTGCCTCCATTGTCGGGCTTGCGGTGGTAGGTGGTTT
AATCCTTTCGCTCCTGCGGCTCAGGAAGGATGAAGTCTCCGTAGCGGCTTGGCGCGAGGAAGATTCCGCCCGTCCATTGG
GAGAGATCCTGTCGCGCCCGCGCTTCATCACCGCTCTTTTCTGCGGCGTCAGTTCCTTCGCGTTAATGAGTTTTGTGATG
ACCGGCGCGCCGCTCGCCATGGTGGGCTGCGGCTTTTCGCCGGACGAGGCGACGCTCGGCATTTCCTGGCACGTGCTTGC
CATGTTCGCGCCGAGCTTCTTCACTGGAAATCTGATCGCGCGATTCGGCAAGGAGCCGATTGTTGCTGCCGGCCTCATTC
TCCTGATCGGCTGCGGCTTGGTGGCGCTCTCCGGCATCGCGCTGTGGCAGTTCTGGCTGGCGCTCGTGCTGCTTGGCGTC
GGCTGGAATTTCGGCTTCATCGGTGCGACCGCCATGGTGGCGGAGTGCTACCGCCCCTCCGAGAAGAACAAGGTGGAGGG
CGTGCACGATTTCCTGCTGTTTTCCACCGTCGCCTTCGCTTCTTTCATGTCGGGCCGTGTCTATCACGGCTTTGGCTGGG
AGATGCTGAACTGGGTGATCTTTCCGGTGGCGGGCCTGTGCCTGGTGATTCTGAGTGTTCTGGCCTTGCAGCGCAGAAGG
ACAGCCCGCCCGGCGTGA

Upstream 100 bases:

>100_bases
AGGCATTCTACGGCGAGGAGGAAGAGCCTAAGCTGGTGAATGCCGTTCTCGACCGTGTGGCACGTCGGATGCGTGGCGAG
GGCAAGGGCAAGGATCCTTC

Downstream 100 bases:

>100_bases
AACCGGGGCATATCGCTTCTGGCTGGGTGCGGCGTTTTGTCCTCATGTGCCTGCTGCGTATATTCGTCGCACGAAAACCT
TGACGCAGACCGGCGTCTTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTAEALYREAKRTALILAAAQAVVGASAPIAISMGSLAGSYLLGSDKSLATAPLTGFNIGVALATLPAAMLAGTFGRRNS
FISGTGVTAIGGVIAVVALFQANFWLFALGLLLVGGGNAFLQQYRFAAADNAPADFKPRAISWVLGGGVISAILGPQVAI
HTRELFAPVMFAGAFASIVGLAVVGGLILSLLRLRKDEVSVAAWREEDSARPLGEILSRPRFITALFCGVSSFALMSFVM
TGAPLAMVGCGFSPDEATLGISWHVLAMFAPSFFTGNLIARFGKEPIVAAGLILLIGCGLVALSGIALWQFWLALVLLGV
GWNFGFIGATAMVAECYRPSEKNKVEGVHDFLLFSTVAFASFMSGRVYHGFGWEMLNWVIFPVAGLCLVILSVLALQRRR
TARPA

Sequences:

>Translated_405_residues
MTAEALYREAKRTALILAAAQAVVGASAPIAISMGSLAGSYLLGSDKSLATAPLTGFNIGVALATLPAAMLAGTFGRRNS
FISGTGVTAIGGVIAVVALFQANFWLFALGLLLVGGGNAFLQQYRFAAADNAPADFKPRAISWVLGGGVISAILGPQVAI
HTRELFAPVMFAGAFASIVGLAVVGGLILSLLRLRKDEVSVAAWREEDSARPLGEILSRPRFITALFCGVSSFALMSFVM
TGAPLAMVGCGFSPDEATLGISWHVLAMFAPSFFTGNLIARFGKEPIVAAGLILLIGCGLVALSGIALWQFWLALVLLGV
GWNFGFIGATAMVAECYRPSEKNKVEGVHDFLLFSTVAFASFMSGRVYHGFGWEMLNWVIFPVAGLCLVILSVLALQRRR
TARPA
>Mature_404_residues
TAEALYREAKRTALILAAAQAVVGASAPIAISMGSLAGSYLLGSDKSLATAPLTGFNIGVALATLPAAMLAGTFGRRNSF
ISGTGVTAIGGVIAVVALFQANFWLFALGLLLVGGGNAFLQQYRFAAADNAPADFKPRAISWVLGGGVISAILGPQVAIH
TRELFAPVMFAGAFASIVGLAVVGGLILSLLRLRKDEVSVAAWREEDSARPLGEILSRPRFITALFCGVSSFALMSFVMT
GAPLAMVGCGFSPDEATLGISWHVLAMFAPSFFTGNLIARFGKEPIVAAGLILLIGCGLVALSGIALWQFWLALVLLGVG
WNFGFIGATAMVAECYRPSEKNKVEGVHDFLLFSTVAFASFMSGRVYHGFGWEMLNWVIFPVAGLCLVILSVLALQRRRT
ARPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 42514; Mature: 42382

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEALYREAKRTALILAAAQAVVGASAPIAISMGSLAGSYLLGSDKSLATAPLTGFNIG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHCCCCCCCCCCCCCCCHHH
VALATLPAAMLAGTFGRRNSFISGTGVTAIGGVIAVVALFQANFWLFALGLLLVGGGNAF
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LQQYRFAAADNAPADFKPRAISWVLGGGVISAILGPQVAIHTRELFAPVMFAGAFASIVG
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
LAVVGGLILSLLRLRKDEVSVAAWREEDSARPLGEILSRPRFITALFCGVSSFALMSFVM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TGAPLAMVGCGFSPDEATLGISWHVLAMFAPSFFTGNLIARFGKEPIVAAGLILLIGCGL
HCCCHHHEECCCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VALSGIALWQFWLALVLLGVGWNFGFIGATAMVAECYRPSEKNKVEGVHDFLLFSTVAFA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SFMSGRVYHGFGWEMLNWVIFPVAGLCLVILSVLALQRRRTARPA
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAEALYREAKRTALILAAAQAVVGASAPIAISMGSLAGSYLLGSDKSLATAPLTGFNIG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHCCCCCCCCCCCCCCCHHH
VALATLPAAMLAGTFGRRNSFISGTGVTAIGGVIAVVALFQANFWLFALGLLLVGGGNAF
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LQQYRFAAADNAPADFKPRAISWVLGGGVISAILGPQVAIHTRELFAPVMFAGAFASIVG
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
LAVVGGLILSLLRLRKDEVSVAAWREEDSARPLGEILSRPRFITALFCGVSSFALMSFVM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TGAPLAMVGCGFSPDEATLGISWHVLAMFAPSFFTGNLIARFGKEPIVAAGLILLIGCGL
HCCCHHHEECCCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VALSGIALWQFWLALVLLGVGWNFGFIGATAMVAECYRPSEKNKVEGVHDFLLFSTVAFA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SFMSGRVYHGFGWEMLNWVIFPVAGLCLVILSVLALQRRRTARPA
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]