Click here to switch to the map view.

The map label for this gene is yqjH [H]

Identifier: 110633168

GI number: 110633168

Start: 899513

End: 900190

Strand: Direct

Name: yqjH [H]

Synonym: Meso_0811

Alternate gene names: 110633168

Gene position: 899513-900190 (Clockwise)

Preceding gene: 110633167

Following gene: 110633176

Centisome position: 20.39

GC content: 64.45

Gene sequence:

>678_bases
ATGGTGCGGGTTACCTTCGGCGGAGAAGGCCTCCGTGGCTTCGGCCAGCCTGTACCCAGTGCTCATATCAAGATCTTTTT
CCCTGAAGGAAATTGGACGCCGCATTCAGATGCGCCGCGACCGCCATCGAGGACCTACACACCACTTGCCTTCGACCCCG
CCAAGAATGAGCTTGAGGTCGAATTCGTGCTGCATGGCGCCGGCCTTGCCGCGGACTGGGTGCGCCGCGCCCGCCGCGGC
GACGTGGTCTATATCGGCGGGCCGCGGGGAGGATTCCAGCCCGCGCACGATCTTCGGGAGATCGTCATTCTGTGCGACGA
CACCGCGCTTCCGGCCGCCACCATGATCGTTCGCGCACTGTCGACGCGCTGCAATGTCAAGCTAGTGGCGGAGGTAGGCG
GAGAGGACGAGGCGCGCGACATCGACAGACTGCCCGCCAGCCGGATCGAATGGCTGGTTCGGGACGACCGCCAGCCCTGC
GGGACACTGGTCCGGCGTCTCGCCGACCTGACGGCCGCCGACGACGCATTCTGGTGGGTGGCCTGCGAGGCAAAGGCGAT
GCGAAAAATGCGCAGTATCCTGCTGGAGCGAGGAAATATTGCGAAGGAACGCCTGATCACGCGCGGCTATTGGCAGGCGG
GCGAGACCAACCACCCGGACCACGATTACGGGGTTTGA

Upstream 100 bases:

>100_bases
CCAGCCCGTGGCTTTTGACATGAACCCATCCGACACTGGTCCGAAGAGACCGCCGCCACGCCGGGCCGAGGTTCTGGGCC
TTGATCAGGTATCACCGAGA

Downstream 100 bases:

>100_bases
CTGCTGAGGAGCGCCTCCGTCGCCGCGGACGGTGGCTGTTCAGTTCGCAGTTGGTATGAAAAGGGCCGGCGCTTCGCACC
GGCCTTTCCGGGCTTTCAGG

Product: FAD-binding 9, siderophore-interacting

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVRVTFGGEGLRGFGQPVPSAHIKIFFPEGNWTPHSDAPRPPSRTYTPLAFDPAKNELEVEFVLHGAGLAADWVRRARRG
DVVYIGGPRGGFQPAHDLREIVILCDDTALPAATMIVRALSTRCNVKLVAEVGGEDEARDIDRLPASRIEWLVRDDRQPC
GTLVRRLADLTAADDAFWWVACEAKAMRKMRSILLERGNIAKERLITRGYWQAGETNHPDHDYGV

Sequences:

>Translated_225_residues
MVRVTFGGEGLRGFGQPVPSAHIKIFFPEGNWTPHSDAPRPPSRTYTPLAFDPAKNELEVEFVLHGAGLAADWVRRARRG
DVVYIGGPRGGFQPAHDLREIVILCDDTALPAATMIVRALSTRCNVKLVAEVGGEDEARDIDRLPASRIEWLVRDDRQPC
GTLVRRLADLTAADDAFWWVACEAKAMRKMRSILLERGNIAKERLITRGYWQAGETNHPDHDYGV
>Mature_225_residues
MVRVTFGGEGLRGFGQPVPSAHIKIFFPEGNWTPHSDAPRPPSRTYTPLAFDPAKNELEVEFVLHGAGLAADWVRRARRG
DVVYIGGPRGGFQPAHDLREIVILCDDTALPAATMIVRALSTRCNVKLVAEVGGEDEARDIDRLPASRIEWLVRDDRQPC
GTLVRRLADLTAADDAFWWVACEAKAMRKMRSILLERGNIAKERLITRGYWQAGETNHPDHDYGV

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=229, Percent_Identity=31.0043668122271, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 25067; Mature: 25067

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVTFGGEGLRGFGQPVPSAHIKIFFPEGNWTPHSDAPRPPSRTYTPLAFDPAKNELEV
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
EFVLHGAGLAADWVRRARRGDVVYIGGPRGGFQPAHDLREIVILCDDTALPAATMIVRAL
EEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHH
STRCNVKLVAEVGGEDEARDIDRLPASRIEWLVRDDRQPCGTLVRRLADLTAADDAFWWV
HCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE
ACEAKAMRKMRSILLERGNIAKERLITRGYWQAGETNHPDHDYGV
EECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRVTFGGEGLRGFGQPVPSAHIKIFFPEGNWTPHSDAPRPPSRTYTPLAFDPAKNELEV
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
EFVLHGAGLAADWVRRARRGDVVYIGGPRGGFQPAHDLREIVILCDDTALPAATMIVRAL
EEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHH
STRCNVKLVAEVGGEDEARDIDRLPASRIEWLVRDDRQPCGTLVRRLADLTAADDAFWWV
HCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE
ACEAKAMRKMRSILLERGNIAKERLITRGYWQAGETNHPDHDYGV
EECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]