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The map label for this gene is 110633176

Identifier: 110633176

GI number: 110633176

Start: 907311

End: 907880

Strand: Direct

Name: 110633176

Synonym: Meso_0819

Alternate gene names: NA

Gene position: 907311-907880 (Clockwise)

Preceding gene: 110633168

Following gene: 110633177

Centisome position: 20.56

GC content: 60.53

Gene sequence:

>570_bases
ATGTCTGTCGTGCCGAAAAAATTCCCATCGATCGAACCGGACGACGTGGTGATCCCCGAGGGAAAGTCTCTCTCCGAGTG
GATTGAAAGCCGCGTCGCACGCTACGAGACCCGCACGCTCGATTGGGATGCGTTGAAATTCCAGGCCGATTACGACCCGA
TCTATCGGCGTGCGCAGATGCGCTATATCGGCACCGGGGCCACCGGCGTGAGCGACGATGAGAATGTCGTTCCGGCAGAA
AACTTCACCTTCTCGACCATGGTTCTGCCGGCCGGCTGCGAAGGTCCGCTCCACATCCACCGCGATGCCGAGGAAGTCTT
CTTCATCCTCAAGGGGCACAAGATCCGTCTCTTCATCGAGCACAAGGGCGAGCTTGTCGAAACCGTCCTGACCGAGCGCG
ATCTCATCTCGGTCCCACCAGGGCTTTACCGTGGGCTGCGCAACGAGGGCATCGAAGAGGCCCTTATGTGCGTGATGATC
GGCAACCCCAAGCCGGTCACCCCGACCTATCCGGAGGACCACCCGGTTTCCAAGATCCCGCGCCCCGCTGGAAATAAGGC
CGCGGGCTGA

Upstream 100 bases:

>100_bases
TCGTCCCGGTACGCACGCGTGCTCGCTCGTCGCGTCCATTTCTGAGCGCCATCCGTACCCATCCGATTGTCTTTCCGAAC
CATCAGCACAGGAGTTCTTG

Downstream 100 bases:

>100_bases
CACCCGCCGGGGGGAGGGGCCGCAGGCCCCTCTCGCTTTGAACACGGCTCTTGTTTTTCATGATGATTATGCGCCAGACC
CTCACCAACGGCATAGAATG

Product: cupin 2, barrel

Products: NA

Alternate protein names: Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSVVPKKFPSIEPDDVVIPEGKSLSEWIESRVARYETRTLDWDALKFQADYDPIYRRAQMRYIGTGATGVSDDENVVPAE
NFTFSTMVLPAGCEGPLHIHRDAEEVFFILKGHKIRLFIEHKGELVETVLTERDLISVPPGLYRGLRNEGIEEALMCVMI
GNPKPVTPTYPEDHPVSKIPRPAGNKAAG

Sequences:

>Translated_189_residues
MSVVPKKFPSIEPDDVVIPEGKSLSEWIESRVARYETRTLDWDALKFQADYDPIYRRAQMRYIGTGATGVSDDENVVPAE
NFTFSTMVLPAGCEGPLHIHRDAEEVFFILKGHKIRLFIEHKGELVETVLTERDLISVPPGLYRGLRNEGIEEALMCVMI
GNPKPVTPTYPEDHPVSKIPRPAGNKAAG
>Mature_188_residues
SVVPKKFPSIEPDDVVIPEGKSLSEWIESRVARYETRTLDWDALKFQADYDPIYRRAQMRYIGTGATGVSDDENVVPAEN
FTFSTMVLPAGCEGPLHIHRDAEEVFFILKGHKIRLFIEHKGELVETVLTERDLISVPPGLYRGLRNEGIEEALMCVMIG
NPKPVTPTYPEDHPVSKIPRPAGNKAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21146; Mature: 21015

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVPKKFPSIEPDDVVIPEGKSLSEWIESRVARYETRTLDWDALKFQADYDPIYRRAQM
CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHE
RYIGTGATGVSDDENVVPAENFTFSTMVLPAGCEGPLHIHRDAEEVFFILKGHKIRLFIE
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEEEE
HKGELVETVLTERDLISVPPGLYRGLRNEGIEEALMCVMIGNPKPVTPTYPEDHPVSKIP
CCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
RPAGNKAAG
CCCCCCCCC
>Mature Secondary Structure 
SVVPKKFPSIEPDDVVIPEGKSLSEWIESRVARYETRTLDWDALKFQADYDPIYRRAQM
CCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHE
RYIGTGATGVSDDENVVPAENFTFSTMVLPAGCEGPLHIHRDAEEVFFILKGHKIRLFIE
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEEEE
HKGELVETVLTERDLISVPPGLYRGLRNEGIEEALMCVMIGNPKPVTPTYPEDHPVSKIP
CCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
RPAGNKAAG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA