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The map label for this gene is 110680890

Identifier: 110680890

GI number: 110680890

Start: 3627490

End: 3627969

Strand: Direct

Name: 110680890

Synonym: RD1_3741

Alternate gene names: NA

Gene position: 3627490-3627969 (Clockwise)

Preceding gene: 110680889

Following gene: 110680891

Centisome position: 87.77

GC content: 54.17

Gene sequence:

>480_bases
ATGACACTCAAGAATATTCGCCGGGGTTTTGCCATTGCCACATTGGCCGCCCTCGTTTCCGTCGGCAGTGCCCACGCGGC
TGACGAATTCTTTATCTCCGACACAAACAAGAACATCGCCATCAATGGGTATGATGCCGTCGCCTATCACACGGCCGGAA
AGCCGGTAAAAGGTGATGCGAACTTCAAATACGAGCACATGGATGTCGTCTGGAAATTCTCTTCTGCCGAGAACATGGCG
GCTTTCCAGGCTGATCCGGCGAAATTTGCCCCTGCCTATGGCGGCTGGTGCACGGTCGGGGCCAGCAAAGGCAAGAAAAT
CGCCACTAAACCTGAGTTGTTCAAGGTGGTTGACGGTCAACTCTACCTGAATTCCTCCGATGGAGCGCACAACCTGTTCC
TCAAGGACGAAGCAGGCACCATCGATACGGCGGACAAGAACTGGACAGAAATCGAAAGCAAGCCCGCATCCTCGCTGTGA

Upstream 100 bases:

>100_bases
AAACTGTGAATGAAACGTCAACCGAGTTCATTAGTCATTCGCGCGACCACCACATAGGCTTGTGGCACGCAAACGGATCA
CTTCAGTAAAAGGACTTCAC

Downstream 100 bases:

>100_bases
TAACCAGGGGCTGACAAGACGGGATCTTGTCAGGACATCGAAAGGGCGCGCACCTCTGCGCGCCCTTTCACGCTCTCGGT
CATATAAGGTGGTTAGGATG

Product: YHS domain-containing protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTLKNIRRGFAIATLAALVSVGSAHAADEFFISDTNKNIAINGYDAVAYHTAGKPVKGDANFKYEHMDVVWKFSSAENMA
AFQADPAKFAPAYGGWCTVGASKGKKIATKPELFKVVDGQLYLNSSDGAHNLFLKDEAGTIDTADKNWTEIESKPASSL

Sequences:

>Translated_159_residues
MTLKNIRRGFAIATLAALVSVGSAHAADEFFISDTNKNIAINGYDAVAYHTAGKPVKGDANFKYEHMDVVWKFSSAENMA
AFQADPAKFAPAYGGWCTVGASKGKKIATKPELFKVVDGQLYLNSSDGAHNLFLKDEAGTIDTADKNWTEIESKPASSL
>Mature_158_residues
TLKNIRRGFAIATLAALVSVGSAHAADEFFISDTNKNIAINGYDAVAYHTAGKPVKGDANFKYEHMDVVWKFSSAENMAA
FQADPAKFAPAYGGWCTVGASKGKKIATKPELFKVVDGQLYLNSSDGAHNLFLKDEAGTIDTADKNWTEIESKPASSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17081; Mature: 16950

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKNIRRGFAIATLAALVSVGSAHAADEFFISDTNKNIAINGYDAVAYHTAGKPVKGDA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCC
NFKYEHMDVVWKFSSAENMAAFQADPAKFAPAYGGWCTVGASKGKKIATKPELFKVVDGQ
CEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCE
LYLNSSDGAHNLFLKDEAGTIDTADKNWTEIESKPASSL
EEEECCCCCEEEEEECCCCCEECCCCCCEECCCCCCCCC
>Mature Secondary Structure 
TLKNIRRGFAIATLAALVSVGSAHAADEFFISDTNKNIAINGYDAVAYHTAGKPVKGDA
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCC
NFKYEHMDVVWKFSSAENMAAFQADPAKFAPAYGGWCTVGASKGKKIATKPELFKVVDGQ
CEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCE
LYLNSSDGAHNLFLKDEAGTIDTADKNWTEIESKPASSL
EEEECCCCCEEEEEECCCCCEECCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA