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The map label for this gene is 110680889

Identifier: 110680889

GI number: 110680889

Start: 3625447

End: 3627078

Strand: Direct

Name: 110680889

Synonym: RD1_3740

Alternate gene names: NA

Gene position: 3625447-3627078 (Clockwise)

Preceding gene: 110680882

Following gene: 110680890

Centisome position: 87.72

GC content: 58.7

Gene sequence:

>1632_bases
ATGAAGGTCGAACTTTACAACTACATCCGCGCGGCGCAAAAACTGAATCGCCGCCAGATGCTCAAGGGCACCGCCGCCGT
TGGCGCCATGGCCATGATGCCAAAAGGGGCCGCAATGGCGGACGGGCACGGCAATGTGCGTGCCGATATCCTGAAAATCC
CCGGCGTGGGCATGGGAACGCCGACGGACAGCGACTATCAGAAGGTCGGCGCGATGTGCATGGAAGGCACCAAGGCGAAT
GTGGCCGAAGGGGAATTCGAAGGGGTTGAGCTGACCTTCATGGGACTGAACAACCAGAACCAGCACAACTTCATCTTCCG
TGGTTTCCTGCGCGCGTGGGAGGATTACACCGGGGCCAAGATCAACTGGATCGACCTCGCACAGGCCGATTACAACGCCC
GCCTGCAACAGTCGATTGCGACAGGGACGGTGGATTTCGACATCATCGAAATGGGTGCCCCGTTTGAAGGCGACGTGTTG
GGCAAGGGCCTCGCCTCGGAGATGCCGGACTGGGTCAAAGAGCAGATCGACATGGACGACTATGTGGATTACCTCAAAGC
GCCGGTCGGCACATGGGATGGCAAGACATATCGCGTCTCGATTGATGGCGACACACATACATTCGCCTATCGCAAGGACT
ATTTCGGCGCGGATTCCATCACCGGTCGTGATGTGCCAACGACATGGCCAGAGGTCAATCAGATCACCAAAGACCTCATC
GGCAAGGAAGATCCGCTGACCGGTCTGCCCGCGCATGGCTATCTGGACCCGCTCAAGGGCTGGGGCGGTTTCGGGTTCTA
TTTCCTCGAAAACCGCGCGGCTCCCTATGCCAAACACCCTGATGATCCGGCATGGCTGTTTGATCCCGACACGATGAAAC
CCCGCGTGAACAATCCGGCCTTCGTGCAGGCGATCCAGGACGTGATGGATCTGATCGAAGCGGGTGCTTACCCCACCGAT
CAGATCAACGCAGACCCCGGCACAACGGCCTTCCAGCAGTTCCTTGCAGGCACCGGCGGCATGATCAGCTGGTGGGGCGA
TGTTGGTGCATCCGCACGCACGTCCGACACTTCCGTTGTCGGTGATGTAGTGGGCTTCAGCATCAACCCGGGCAGCGAAA
AGGTCTGGAACACCGCCGCAGGGCAATGGGATGAAATGCCCAACGTCGCCCCGAACAACGCCTATATCGGCTGGGGCATC
TATGTGATGGCCACCGTAGAGGGCGACGAGAAGAAGAAAAAGGCGGCGTGGTCGGTGGCCGCACATCTGGGCGGCAAAGA
CATCTCGCTCTGGGCATCTGCTTATCCAACCGGGTTCCAGCCCTATCGCAACTCGCACTTCCAGTATGAAGAGTGGGAAG
AGGCAGGCTATGACCGCGCCTTTGTCGAAGACTACCTCGGTTCAAACGCGGACAGCTACAACCATCCGAACGCCGCTGTG
GAACCGCGCATTCCCGGTATTTTCCAATACTATTCCGTCGCCGAAGACGAATTGGCCAAGGGCTACGCCGGTCAATACGC
CTCAGCACAGGAAACGGCAGACGCCATCGCGGCAGCCTGGGAGAAGATCACCGACCAGATCGGTCGCGAAAGCCAGATCG
CGCTTTACAAGGCATCTCTGGGCCTTTCATAG

Upstream 100 bases:

>100_bases
GGGGAGCTTACGGTATCGGTCAATCAGATAAACCTGATGGCTGGCTTATCTGCCGCCTGCCCGTTCCAGCAGATCTGACT
TACTTCCAGGGAGGACACAA

Downstream 100 bases:

>100_bases
TCCGGTTGAAAAGGGAAGGCGCGGTTTGTTTCCGCGCCTTCTGCCCTGATCAGGCAGCGTAAACACCACGCATGACTTGC
AGCGGCGGGTCCGGGTACAA

Product: solute-binding protein, putative

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKVELYNYIRAAQKLNRRQMLKGTAAVGAMAMMPKGAAMADGHGNVRADILKIPGVGMGTPTDSDYQKVGAMCMEGTKAN
VAEGEFEGVELTFMGLNNQNQHNFIFRGFLRAWEDYTGAKINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDVL
GKGLASEMPDWVKEQIDMDDYVDYLKAPVGTWDGKTYRVSIDGDTHTFAYRKDYFGADSITGRDVPTTWPEVNQITKDLI
GKEDPLTGLPAHGYLDPLKGWGGFGFYFLENRAAPYAKHPDDPAWLFDPDTMKPRVNNPAFVQAIQDVMDLIEAGAYPTD
QINADPGTTAFQQFLAGTGGMISWWGDVGASARTSDTSVVGDVVGFSINPGSEKVWNTAAGQWDEMPNVAPNNAYIGWGI
YVMATVEGDEKKKKAAWSVAAHLGGKDISLWASAYPTGFQPYRNSHFQYEEWEEAGYDRAFVEDYLGSNADSYNHPNAAV
EPRIPGIFQYYSVAEDELAKGYAGQYASAQETADAIAAAWEKITDQIGRESQIALYKASLGLS

Sequences:

>Translated_543_residues
MKVELYNYIRAAQKLNRRQMLKGTAAVGAMAMMPKGAAMADGHGNVRADILKIPGVGMGTPTDSDYQKVGAMCMEGTKAN
VAEGEFEGVELTFMGLNNQNQHNFIFRGFLRAWEDYTGAKINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDVL
GKGLASEMPDWVKEQIDMDDYVDYLKAPVGTWDGKTYRVSIDGDTHTFAYRKDYFGADSITGRDVPTTWPEVNQITKDLI
GKEDPLTGLPAHGYLDPLKGWGGFGFYFLENRAAPYAKHPDDPAWLFDPDTMKPRVNNPAFVQAIQDVMDLIEAGAYPTD
QINADPGTTAFQQFLAGTGGMISWWGDVGASARTSDTSVVGDVVGFSINPGSEKVWNTAAGQWDEMPNVAPNNAYIGWGI
YVMATVEGDEKKKKAAWSVAAHLGGKDISLWASAYPTGFQPYRNSHFQYEEWEEAGYDRAFVEDYLGSNADSYNHPNAAV
EPRIPGIFQYYSVAEDELAKGYAGQYASAQETADAIAAAWEKITDQIGRESQIALYKASLGLS
>Mature_543_residues
MKVELYNYIRAAQKLNRRQMLKGTAAVGAMAMMPKGAAMADGHGNVRADILKIPGVGMGTPTDSDYQKVGAMCMEGTKAN
VAEGEFEGVELTFMGLNNQNQHNFIFRGFLRAWEDYTGAKINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDVL
GKGLASEMPDWVKEQIDMDDYVDYLKAPVGTWDGKTYRVSIDGDTHTFAYRKDYFGADSITGRDVPTTWPEVNQITKDLI
GKEDPLTGLPAHGYLDPLKGWGGFGFYFLENRAAPYAKHPDDPAWLFDPDTMKPRVNNPAFVQAIQDVMDLIEAGAYPTD
QINADPGTTAFQQFLAGTGGMISWWGDVGASARTSDTSVVGDVVGFSINPGSEKVWNTAAGQWDEMPNVAPNNAYIGWGI
YVMATVEGDEKKKKAAWSVAAHLGGKDISLWASAYPTGFQPYRNSHFQYEEWEEAGYDRAFVEDYLGSNADSYNHPNAAV
EPRIPGIFQYYSVAEDELAKGYAGQYASAQETADAIAAAWEKITDQIGRESQIALYKASLGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59561; Mature: 59561

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVELYNYIRAAQKLNRRQMLKGTAAVGAMAMMPKGAAMADGHGNVRADILKIPGVGMGT
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCC
PTDSDYQKVGAMCMEGTKANVAEGEFEGVELTFMGLNNQNQHNFIFRGFLRAWEDYTGAK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCE
INWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDVLGKGLASEMPDWVKEQIDMDD
EEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCHHHHCHHHHHHHCCHHH
YVDYLKAPVGTWDGKTYRVSIDGDTHTFAYRKDYFGADSITGRDVPTTWPEVNQITKDLI
HHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GKEDPLTGLPAHGYLDPLKGWGGFGFYFLENRAAPYAKHPDDPAWLFDPDTMKPRVNNPA
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCHH
FVQAIQDVMDLIEAGAYPTDQINADPGTTAFQQFLAGTGGMISWWGDVGASARTSDTSVV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH
GDVVGFSINPGSEKVWNTAAGQWDEMPNVAPNNAYIGWGIYVMATVEGDEKKKKAAWSVA
HHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHH
AHLGGKDISLWASAYPTGFQPYRNSHFQYEEWEEAGYDRAFVEDYLGSNADSYNHPNAAV
HHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
EPRIPGIFQYYSVAEDELAKGYAGQYASAQETADAIAAAWEKITDQIGRESQIALYKASL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GLS
CCC
>Mature Secondary Structure
MKVELYNYIRAAQKLNRRQMLKGTAAVGAMAMMPKGAAMADGHGNVRADILKIPGVGMGT
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCC
PTDSDYQKVGAMCMEGTKANVAEGEFEGVELTFMGLNNQNQHNFIFRGFLRAWEDYTGAK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCE
INWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDVLGKGLASEMPDWVKEQIDMDD
EEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCHHHHCHHHHHHHCCHHH
YVDYLKAPVGTWDGKTYRVSIDGDTHTFAYRKDYFGADSITGRDVPTTWPEVNQITKDLI
HHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GKEDPLTGLPAHGYLDPLKGWGGFGFYFLENRAAPYAKHPDDPAWLFDPDTMKPRVNNPA
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCHH
FVQAIQDVMDLIEAGAYPTDQINADPGTTAFQQFLAGTGGMISWWGDVGASARTSDTSVV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH
GDVVGFSINPGSEKVWNTAAGQWDEMPNVAPNNAYIGWGIYVMATVEGDEKKKKAAWSVA
HHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHH
AHLGGKDISLWASAYPTGFQPYRNSHFQYEEWEEAGYDRAFVEDYLGSNADSYNHPNAAV
HHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
EPRIPGIFQYYSVAEDELAKGYAGQYASAQETADAIAAAWEKITDQIGRESQIALYKASL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GLS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA