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The map label for this gene is 110680622

Identifier: 110680622

GI number: 110680622

Start: 3327714

End: 3328010

Strand: Direct

Name: 110680622

Synonym: RD1_3456

Alternate gene names: NA

Gene position: 3327714-3328010 (Clockwise)

Preceding gene: 110680621

Following gene: 110680623

Centisome position: 80.51

GC content: 59.93

Gene sequence:

>297_bases
ATGTCGAAACGGAGGCAACATCACCCAGAATTCAAGGCCAAGGTCACGTTAGAGGCGCTGAAGGGCGAAGAGACGGTCAG
CGAGTTGGCCAGTCGATTTGGGGTTCACCCAACGATGATCCATCAATGGAAGCGTGCCTTGCTTGAAGGCGCGTCAGGCG
TATTTGAGCGTGGCGGCCGGAAGACACCGGAAGTCGATGAAGAGCAGGTCAAAGACCTCCATGCCAAGATCGGCGAGTTG
GCCGTCGCCAACGGTACGGGGGCTTACGCGGCCCCACTGGGGCCACGGTCCCCCTAG

Upstream 100 bases:

>100_bases
TTGAAAAAATTTGATTGAATTGAGCTGCCCCCCGAAGTTCGGACACTGACGAAAGCTGCGAATTGTTTTCTGCTGATCTT
CAACACGAAGGAGATCGGAC

Downstream 100 bases:

>100_bases
CTTTGGCAAGAAAGCTCAAACCCTGGACCGGCAAGTGAGGCGCAAGATAATTTAGCCGAGCCTTCCAGATCTGTCTATCG
GCAAGCAATGCGCGTTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS3/IS; Transposase InsN For Insertion Sequence Element IS; Transposase Subfamily; Transposase IS3 Family Protein; Transposase And Inactivated Derivative; Transposase IS3 Family

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSKRRQHHPEFKAKVTLEALKGEETVSELASRFGVHPTMIHQWKRALLEGASGVFERGGRKTPEVDEEQVKDLHAKIGEL
AVANGTGAYAAPLGPRSP

Sequences:

>Translated_98_residues
MSKRRQHHPEFKAKVTLEALKGEETVSELASRFGVHPTMIHQWKRALLEGASGVFERGGRKTPEVDEEQVKDLHAKIGEL
AVANGTGAYAAPLGPRSP
>Mature_97_residues
SKRRQHHPEFKAKVTLEALKGEETVSELASRFGVHPTMIHQWKRALLEGASGVFERGGRKTPEVDEEQVKDLHAKIGELA
VANGTGAYAAPLGPRSP

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10726; Mature: 10595

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRRQHHPEFKAKVTLEALKGEETVSELASRFGVHPTMIHQWKRALLEGASGVFERGGR
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
KTPEVDEEQVKDLHAKIGELAVANGTGAYAAPLGPRSP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
SKRRQHHPEFKAKVTLEALKGEETVSELASRFGVHPTMIHQWKRALLEGASGVFERGGR
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
KTPEVDEEQVKDLHAKIGELAVANGTGAYAAPLGPRSP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA