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The map label for this gene is 110680388

Identifier: 110680388

GI number: 110680388

Start: 3070780

End: 3071817

Strand: Direct

Name: 110680388

Synonym: RD1_3206

Alternate gene names: NA

Gene position: 3070780-3071817 (Clockwise)

Preceding gene: 110680387

Following gene: 110680389

Centisome position: 74.3

GC content: 62.62

Gene sequence:

>1038_bases
ATGGCCCGCGCGCCATTTGAAATCGCGGGGAAAACGATCCTTGCCGGGACCTCGCAAACCGTTCACTTGCCGGTCTCGAT
CCTGCCTGATCACACGCCCGTCACCCTGTCGGTTCAGGTCCATCACGGCAAACGTGCCGGACCTACGATGTTTGTCTCGG
CCGCCGTGCACGGGGATGAGGTCATTGGTGTGGAGATCGTGCGGCGTCTGCTGCGCGCGCCGCAACTGTCGGCCCTGCGC
GGGACGCTTTTGGTGGTGCCGATCGTCAACGCCTTTGGCTTTCTGAACCGCTCGCGGTATCTGCCCGACCGGCGGGATCT
CAACCGGTGCTTTCCGGGGCATCCATCGGGGTCGTTGGGCGCGCGGCTTGCGCATATCTTTCTGCAAGATGTGGTCTTGC
GCTGTGATACCGGTATTGACCTGCATTCAGCGGCCATTCACCGCACCAATCTGCCACAGATCCGCATCTCTCCCGGTGAT
AGCGCGACGCGCGCCATGGCGATGGCGTTCGGGGCGCCGGTTGTGTTGCAATCCTCGCTGCGGGCAGGGTCGCTGCGCGC
CGAAGCCGCAGAACGCGGCACCTCTGTTTTATTGTATGAGGCGGGTGAAGGTCTGCGGTTTGACGAACTTGCCGTGCGCG
CCGGTGTGGCGGGCATTCTGCGCGTCATGCGCAGCCTAGGCATGCTGCCGGCCAAGGGGATCGCCAAAGCGAAGGTCGCG
CCTTATGTCTGCAAATCGTCGTCATGGGTGCGCGCGCCTGCGGGCGGGGTGCTGAGGACCTTCCGCGCCGAGGGGGAAAC
CGTCGAAAAAGGCGAAACCCTTGCATGCGTCTCCGACCCCTTTGGCGAGGTCGAGACGGACATCATCTCACCCTCTTCGG
GCATCCTGATCGGCAGGGCGATTTTGCCCGTCGTCAACGAAGGGGATGCGGTTTTTCACCTCGCACAACTCAGCCCGGAA
GCCGCCGAAGACACCGTTGAAGGCCTTGCGCTGCAGCTGGAAACCGATCCGCTGTTTGATGAGGATGAAATCATCTGA

Upstream 100 bases:

>100_bases
CCCCGAGGCGGAATATCAGGAAACGGTTCACAAATCGAACGCGATCCGACGCGCGGCGGCAGATGCTGCACGCTTCAGCG
GTGAAGGCAACCGTTAGGCC

Downstream 100 bases:

>100_bases
GGCGGCGCTACCGCACTGCGGCCCGATTAATTTGACGCGGTTTGCAACTAACTTGTTGGTAAAAAAAACACCGCTGAACA
CGGGAAATGGTGGTTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Ectoine Utilization Protein EutE; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Deacylase-Like; Succinylglutamate Desuccinylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MARAPFEIAGKTILAGTSQTVHLPVSILPDHTPVTLSVQVHHGKRAGPTMFVSAAVHGDEVIGVEIVRRLLRAPQLSALR
GTLLVVPIVNAFGFLNRSRYLPDRRDLNRCFPGHPSGSLGARLAHIFLQDVVLRCDTGIDLHSAAIHRTNLPQIRISPGD
SATRAMAMAFGAPVVLQSSLRAGSLRAEAAERGTSVLLYEAGEGLRFDELAVRAGVAGILRVMRSLGMLPAKGIAKAKVA
PYVCKSSSWVRAPAGGVLRTFRAEGETVEKGETLACVSDPFGEVETDIISPSSGILIGRAILPVVNEGDAVFHLAQLSPE
AAEDTVEGLALQLETDPLFDEDEII

Sequences:

>Translated_345_residues
MARAPFEIAGKTILAGTSQTVHLPVSILPDHTPVTLSVQVHHGKRAGPTMFVSAAVHGDEVIGVEIVRRLLRAPQLSALR
GTLLVVPIVNAFGFLNRSRYLPDRRDLNRCFPGHPSGSLGARLAHIFLQDVVLRCDTGIDLHSAAIHRTNLPQIRISPGD
SATRAMAMAFGAPVVLQSSLRAGSLRAEAAERGTSVLLYEAGEGLRFDELAVRAGVAGILRVMRSLGMLPAKGIAKAKVA
PYVCKSSSWVRAPAGGVLRTFRAEGETVEKGETLACVSDPFGEVETDIISPSSGILIGRAILPVVNEGDAVFHLAQLSPE
AAEDTVEGLALQLETDPLFDEDEII
>Mature_344_residues
ARAPFEIAGKTILAGTSQTVHLPVSILPDHTPVTLSVQVHHGKRAGPTMFVSAAVHGDEVIGVEIVRRLLRAPQLSALRG
TLLVVPIVNAFGFLNRSRYLPDRRDLNRCFPGHPSGSLGARLAHIFLQDVVLRCDTGIDLHSAAIHRTNLPQIRISPGDS
ATRAMAMAFGAPVVLQSSLRAGSLRAEAAERGTSVLLYEAGEGLRFDELAVRAGVAGILRVMRSLGMLPAKGIAKAKVAP
YVCKSSSWVRAPAGGVLRTFRAEGETVEKGETLACVSDPFGEVETDIISPSSGILIGRAILPVVNEGDAVFHLAQLSPEA
AEDTVEGLALQLETDPLFDEDEII

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36674; Mature: 36543

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00132 CARBOXYPEPT_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAPFEIAGKTILAGTSQTVHLPVSILPDHTPVTLSVQVHHGKRAGPTMFVSAAVHGDE
CCCCCHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEECCCC
VIGVEIVRRLLRAPQLSALRGTLLVVPIVNAFGFLNRSRYLPDRRDLNRCFPGHPSGSLG
EEHHHHHHHHHCCCCCHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHH
ARLAHIFLQDVVLRCDTGIDLHSAAIHRTNLPQIRISPGDSATRAMAMAFGAPVVLQSSL
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHCC
RAGSLRAEAAERGTSVLLYEAGEGLRFDELAVRAGVAGILRVMRSLGMLPAKGIAKAKVA
CCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PYVCKSSSWVRAPAGGVLRTFRAEGETVEKGETLACVSDPFGEVETDIISPSSGILIGRA
CEEECCCCEEECCCCHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHEECCCCCEEEEEE
ILPVVNEGDAVFHLAQLSPEAAEDTVEGLALQLETDPLFDEDEII
EEEEECCCCCEEEEECCCCHHHHHHHHCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
ARAPFEIAGKTILAGTSQTVHLPVSILPDHTPVTLSVQVHHGKRAGPTMFVSAAVHGDE
CCCCHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEECCCC
VIGVEIVRRLLRAPQLSALRGTLLVVPIVNAFGFLNRSRYLPDRRDLNRCFPGHPSGSLG
EEHHHHHHHHHCCCCCHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHH
ARLAHIFLQDVVLRCDTGIDLHSAAIHRTNLPQIRISPGDSATRAMAMAFGAPVVLQSSL
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHCC
RAGSLRAEAAERGTSVLLYEAGEGLRFDELAVRAGVAGILRVMRSLGMLPAKGIAKAKVA
CCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PYVCKSSSWVRAPAGGVLRTFRAEGETVEKGETLACVSDPFGEVETDIISPSSGILIGRA
CEEECCCCEEECCCCHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHEECCCCCEEEEEE
ILPVVNEGDAVFHLAQLSPEAAEDTVEGLALQLETDPLFDEDEII
EEEEECCCCCEEEEECCCCHHHHHHHHCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA