Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680167

Identifier: 110680167

GI number: 110680167

Start: 2845567

End: 2845980

Strand: Direct

Name: 110680167

Synonym: RD1_2968

Alternate gene names: NA

Gene position: 2845567-2845980 (Clockwise)

Preceding gene: 110680166

Following gene: 110680168

Centisome position: 68.85

GC content: 64.25

Gene sequence:

>414_bases
ATGACTGTCATCGTAACCGATACGGGCTTTGCCCCGGACGACTGGACCGAGGGTTTTGTGGCCCTCGGCGCTGCCAATGA
CGCCGAAGCGCTGGATGTGCCCTCGGATGCAGACCCGAACCAGATCCCGATCTGTGACGGGCTTCATATGGTGCGCATTG
ATTTTCCATCCTCCGCGGACGGGCGCGGCTTTACGATTGCGCGGGCCTTGCGCCTGCGCGGCTACACCGGGCGGCTGCGG
GCGCGCGGACATGTGCTTGCGGATCAATATGCGATGGCGCGGCGCTGCGGCTTTGATGAGGTCGAGATTGACGCAAGCCT
CGCCAAACGCCAGCCCGCAGAGCAGTGGCAGTTCCGTGCCAACTGGCAGGCACATGACTATCAGAACCGCCTGCGCGGCG
CGGCCACAGGGTAG

Upstream 100 bases:

>100_bases
GCGGCGAAGACGCGCGCGCCGGACGCTGGCGCAACACTGAAAAAGACGAATGCGGCATCCATTTTGTGAACGGCAAAGTG
GTCCGCCAAGGAGATATGAA

Downstream 100 bases:

>100_bases
CGCGGCAAAGCGTCCTGCTTTCAAATTCCAAAAACACTTTCTAAAAAGGCGTGGCAGGTGTAAGCCTGCCTTGACATATC
CATGACCGAGCATGCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTVIVTDTGFAPDDWTEGFVALGAANDAEALDVPSDADPNQIPICDGLHMVRIDFPSSADGRGFTIARALRLRGYTGRLR
ARGHVLADQYAMARRCGFDEVEIDASLAKRQPAEQWQFRANWQAHDYQNRLRGAATG

Sequences:

>Translated_137_residues
MTVIVTDTGFAPDDWTEGFVALGAANDAEALDVPSDADPNQIPICDGLHMVRIDFPSSADGRGFTIARALRLRGYTGRLR
ARGHVLADQYAMARRCGFDEVEIDASLAKRQPAEQWQFRANWQAHDYQNRLRGAATG
>Mature_136_residues
TVIVTDTGFAPDDWTEGFVALGAANDAEALDVPSDADPNQIPICDGLHMVRIDFPSSADGRGFTIARALRLRGYTGRLRA
RGHVLADQYAMARRCGFDEVEIDASLAKRQPAEQWQFRANWQAHDYQNRLRGAATG

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15093; Mature: 14962

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIVTDTGFAPDDWTEGFVALGAANDAEALDVPSDADPNQIPICDGLHMVRIDFPSSAD
CEEEEECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCEEECCEEEEEEECCCCCC
GRGFTIARALRLRGYTGRLRARGHVLADQYAMARRCGFDEVEIDASLAKRQPAEQWQFRA
CCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCEEEC
NWQAHDYQNRLRGAATG
CCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
TVIVTDTGFAPDDWTEGFVALGAANDAEALDVPSDADPNQIPICDGLHMVRIDFPSSAD
EEEEECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCEEECCEEEEEEECCCCCC
GRGFTIARALRLRGYTGRLRARGHVLADQYAMARRCGFDEVEIDASLAKRQPAEQWQFRA
CCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCEEEC
NWQAHDYQNRLRGAATG
CCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA