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The map label for this gene is dgoK [H]

Identifier: 110680072

GI number: 110680072

Start: 2737315

End: 2738220

Strand: Direct

Name: dgoK [H]

Synonym: RD1_2867

Alternate gene names: 110680072

Gene position: 2737315-2738220 (Clockwise)

Preceding gene: 110680071

Following gene: 110680073

Centisome position: 66.23

GC content: 63.91

Gene sequence:

>906_bases
ATGACCGGGACATGCACACCAGAGTGGATCGCGCTGGATTGGGGCACGTCAAACCTGCGCGCTTTCGCGATGCAGGGGGC
CACGGTTCTGGAGCGCGCAGAGTCAAACGCCGGCATGCGCAAACTTGAACCCGCCCAGTTCGAACCCGTGTTGCAGGACC
TGATCGACCCCTGGTTGCACGAAGGGCTGGGCGCGCTCATCGCCTGCGGCATGGTCGGCGCGCGGCAAGGCTGGGCGGAA
GCCCCTTACCGCGCGGTGCCTTGTGCTCCGGTCGCGGAGGGGCTGACGCAGATCACCATGCAGAGCGGGCACCGCGTGCA
TATTGTGTCAGGCCTGTCGCAGACCGCCCCCCCCGATGTGATGCGCGGAGAAGAAACGCAGATCGCGGGCTTTCTCAGCC
TCAACCCGAAATGGGACGGTGTGTTGTGCATGCCGGGCACCCATACCAAGTGGGTGCATCTGAGCGCGGGTGAAGTCGTG
AGTTTTCAGACCTTTATGACCGGGGAGATCTTTGCGCTGCTCAGCGAGTCTTCGGTTCTGCGCCATTCGGTTGTGCCAGA
CACCTGGGACGGCTCCGCGTTTCAGGACGCTGTTGCCGACAGCCTGAGCCACCCCGAACGCATGGCGGCAAAGCTCTTTG
CGCTGCGGGCGGGGGATTTGCTGAAGCTGAACGACCAAGGCAGCGCCCGCGCAGCACTGTCGGGTTATCTCATCGGTATG
GAAATTGCCGCCACACGCCCCTATTGGCTGGGGCAAAACCTCGCCATTCTGGGCATGGGCGCGCAGGCGCAGGCCTATCA
GGGCGCGCTGAGCGCGCAGGGCGTGCCTGCCACCATGGTCGATACCGAACGCGCCACTCTGGCGGGGTTAACCGCCGTCC
ACCGTCAATTGAAAGCCTGCATATGA

Upstream 100 bases:

>100_bases
GTCGATGCCGTGCTTTTTCTCGCCTCGAAAACCAGCCGTATGATGACCGGGCAATGCATGGTCGTGGATGGCGGTGTGGT
GACAACAGGGTGAGCAGGCA

Downstream 100 bases:

>100_bases
CCTTGCCCCTGATCGCTATTCTGCGCGGTGTGACCCCGGATGAGGTCTGCGCTGTCGCGCACTGCCTGCTCGACGCCGGG
ATCACCCAGATCGAGGTGCC

Product: 2-dehydro-3-deoxygalactonokinase, putative

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTGTCTPEWIALDWGTSNLRAFAMQGATVLERAESNAGMRKLEPAQFEPVLQDLIDPWLHEGLGALIACGMVGARQGWAE
APYRAVPCAPVAEGLTQITMQSGHRVHIVSGLSQTAPPDVMRGEETQIAGFLSLNPKWDGVLCMPGTHTKWVHLSAGEVV
SFQTFMTGEIFALLSESSVLRHSVVPDTWDGSAFQDAVADSLSHPERMAAKLFALRAGDLLKLNDQGSARAALSGYLIGM
EIAATRPYWLGQNLAILGMGAQAQAYQGALSAQGVPATMVDTERATLAGLTAVHRQLKACI

Sequences:

>Translated_301_residues
MTGTCTPEWIALDWGTSNLRAFAMQGATVLERAESNAGMRKLEPAQFEPVLQDLIDPWLHEGLGALIACGMVGARQGWAE
APYRAVPCAPVAEGLTQITMQSGHRVHIVSGLSQTAPPDVMRGEETQIAGFLSLNPKWDGVLCMPGTHTKWVHLSAGEVV
SFQTFMTGEIFALLSESSVLRHSVVPDTWDGSAFQDAVADSLSHPERMAAKLFALRAGDLLKLNDQGSARAALSGYLIGM
EIAATRPYWLGQNLAILGMGAQAQAYQGALSAQGVPATMVDTERATLAGLTAVHRQLKACI
>Mature_300_residues
TGTCTPEWIALDWGTSNLRAFAMQGATVLERAESNAGMRKLEPAQFEPVLQDLIDPWLHEGLGALIACGMVGARQGWAEA
PYRAVPCAPVAEGLTQITMQSGHRVHIVSGLSQTAPPDVMRGEETQIAGFLSLNPKWDGVLCMPGTHTKWVHLSAGEVVS
FQTFMTGEIFALLSESSVLRHSVVPDTWDGSAFQDAVADSLSHPERMAAKLFALRAGDLLKLNDQGSARAALSGYLIGME
IAATRPYWLGQNLAILGMGAQAQAYQGALSAQGVPATMVDTERATLAGLTAVHRQLKACI

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=293, Percent_Identity=35.4948805460751, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 32124; Mature: 31993

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTCTPEWIALDWGTSNLRAFAMQGATVLERAESNAGMRKLEPAQFEPVLQDLIDPWLH
CCCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EGLGALIACGMVGARQGWAEAPYRAVPCAPVAEGLTQITMQSGHRVHIVSGLSQTAPPDV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
MRGEETQIAGFLSLNPKWDGVLCMPGTHTKWVHLSAGEVVSFQTFMTGEIFALLSESSVL
HCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCHHH
RHSVVPDTWDGSAFQDAVADSLSHPERMAAKLFALRAGDLLKLNDQGSARAALSGYLIGM
HHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHEEEEE
EIAATRPYWLGQNLAILGMGAQAQAYQGALSAQGVPATMVDTERATLAGLTAVHRQLKAC
EEECCCCEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure 
TGTCTPEWIALDWGTSNLRAFAMQGATVLERAESNAGMRKLEPAQFEPVLQDLIDPWLH
CCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EGLGALIACGMVGARQGWAEAPYRAVPCAPVAEGLTQITMQSGHRVHIVSGLSQTAPPDV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
MRGEETQIAGFLSLNPKWDGVLCMPGTHTKWVHLSAGEVVSFQTFMTGEIFALLSESSVL
HCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCHHH
RHSVVPDTWDGSAFQDAVADSLSHPERMAAKLFALRAGDLLKLNDQGSARAALSGYLIGM
HHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHEEEEE
EIAATRPYWLGQNLAILGMGAQAQAYQGALSAQGVPATMVDTERATLAGLTAVHRQLKAC
EEECCCCEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]