BacMap

Definition	Roseobacter denitrificans OCh 114, complete genome.
Accession	NC_008209
Length	4,133,097

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The map label for this gene is fabG [H]

Identifier: 110680071

GI number: 110680071

Start: 2736537

End: 2737307

Strand: Direct

Name: fabG [H]

Synonym: RD1_2866

Alternate gene names: 110680071

Gene position: 2736537-2737307 (Clockwise)

Preceding gene: 110680070

Following gene: 110680072

Centisome position: 66.21

GC content: 61.74

Gene sequence:

>771_bases
ATGACCCAGACCGCAACTTTTCATGACCTCAAGGGCGCTTCGATCTACATCACCGGGGGCGGTTCGGGCATCGGTGCGGA
CCTCACGGACGGGTTTCTGGCGCAGGGGGCCAAGGTCGCCTTTATCGGGCGCTCCGATGCCAGTGCTTTTGTGGCGCAGA
TGGAAGAGAAGCACGGGCGTGCGCCGCTGTTCCTGCAGGGCGATATCACGGAGACGCACCGGCTGCGCGAAACGATTGCC
GCCGCCGAAAAGGCCCATGGCCCCATTCACGCACTGGTGTCCAACGCCGCCAACGACCAGCGCCACAACTGGCTCGAAAC
CACACCCGAGGAATGGGATGCCTATCTGGACATCAACCTCAAAGCCTACTTCTTCGCAGCGCAAGCGGTTGCGGGGTCGA
TGATCAAACGGGGGGCCGGGTCCATCATCAATTTCAGCTCTATCAGCTATATGATGGGCAACGCAGGCTATCCGGCCTAC
ACGGCGGCAAATGGCGGCATCACTGCGCTGACCCGCAGCCTTGCACGCGAGTTGGGCCCCGATGGCATTCGGGTGAATGC
GCTCGCACCGGGGTGGGTGCTGACACAGAAACAGCTGGACAAATGGGCCACCCCCGACGGGTTGGCCGCGCATCTGGAGC
GGCAATGCCTGAAAACCCATCTGGAGCCGCGCGACATCGTCGATGCCGTGCTTTTTCTCGCCTCGAAAACCAGCCGTATG
ATGACCGGGCAATGCATGGTCGTGGATGGCGGTGTGGTGACAACAGGGTGA

Upstream 100 bases:

>100_bases
CCAAATTCGCCAAAACCAAACTGGCCCTGCGGCGTCTGCCCATGTACCCCTTGCACGGGAGGACGCAGCCCCTGACACCC
CCAACTTCGGAGAGACCCCG

Downstream 100 bases:

>100_bases
GCAGGCAATGACCGGGACATGCACACCAGAGTGGATCGCGCTGGATTGGGGCACGTCAAACCTGCGCGCTTTCGCGATGC
AGGGGGCCACGGTTCTGGAG

Product: oxidoreductase, putative

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTQTATFHDLKGASIYITGGGSGIGADLTDGFLAQGAKVAFIGRSDASAFVAQMEEKHGRAPLFLQGDITETHRLRETIA
AAEKAHGPIHALVSNAANDQRHNWLETTPEEWDAYLDINLKAYFFAAQAVAGSMIKRGAGSIINFSSISYMMGNAGYPAY
TAANGGITALTRSLARELGPDGIRVNALAPGWVLTQKQLDKWATPDGLAAHLERQCLKTHLEPRDIVDAVLFLASKTSRM
MTGQCMVVDGGVVTTG

Sequences:

>Translated_256_residues
MTQTATFHDLKGASIYITGGGSGIGADLTDGFLAQGAKVAFIGRSDASAFVAQMEEKHGRAPLFLQGDITETHRLRETIA
AAEKAHGPIHALVSNAANDQRHNWLETTPEEWDAYLDINLKAYFFAAQAVAGSMIKRGAGSIINFSSISYMMGNAGYPAY
TAANGGITALTRSLARELGPDGIRVNALAPGWVLTQKQLDKWATPDGLAAHLERQCLKTHLEPRDIVDAVLFLASKTSRM
MTGQCMVVDGGVVTTG
>Mature_255_residues
TQTATFHDLKGASIYITGGGSGIGADLTDGFLAQGAKVAFIGRSDASAFVAQMEEKHGRAPLFLQGDITETHRLRETIAA
AEKAHGPIHALVSNAANDQRHNWLETTPEEWDAYLDINLKAYFFAAQAVAGSMIKRGAGSIINFSSISYMMGNAGYPAYT
AANGGITALTRSLARELGPDGIRVNALAPGWVLTQKQLDKWATPDGLAAHLERQCLKTHLEPRDIVDAVLFLASKTSRMM
TGQCMVVDGGVVTTG

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=34.4262295081967, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=32.9457364341085, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI32483357, Length=174, Percent_Identity=38.5057471264368, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=31.2236286919831, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI126723750, Length=189, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=31.9587628865979, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=28.2258064516129, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI126723191, Length=111, Percent_Identity=42.3423423423423, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4758504, Length=200, Percent_Identity=30, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI302344755, Length=108, Percent_Identity=42.5925925925926, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=28.5087719298246, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI66933014, Length=152, Percent_Identity=27.6315789473684, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI83715985, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4503817, Length=187, Percent_Identity=25.668449197861, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI20149619, Length=205, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=27.1604938271605, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=32.0158102766798, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=30.6451612903226, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=30.8641975308642, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=29.0983606557377, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=30.4878048780488, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=30.2788844621514, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=30.241935483871, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=30.8641975308642, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=28.2786885245902, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=27.4193548387097, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=26.171875, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788891, Length=265, Percent_Identity=27.9245283018868, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787526, Length=239, Percent_Identity=27.1966527196653, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787820, Length=226, Percent_Identity=25.2212389380531, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=31.7073170731707, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=32.6359832635983, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=28.6885245901639, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=27.710843373494, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=27.3469387755102, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.996282527881, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=28.5171102661597, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=26.0223048327138, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=27.5193798449612, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=28.2442748091603, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=29.1828793774319, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=25.7936507936508, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=28.4090909090909, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=168, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=279, Percent_Identity=27.2401433691756, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=27.2388059701493, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=29.4339622641509, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=28.1954887218045, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=186, Percent_Identity=27.9569892473118, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=26.6129032258064, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322226, Length=193, Percent_Identity=28.4974093264249, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=241, Percent_Identity=26.5560165975104, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=31.5789473684211, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=28.8537549407115, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=29.8387096774194, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=28.1124497991968, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=27.2, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=26.5384615384615, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24640492, Length=188, Percent_Identity=26.5957446808511, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=25.8620689655172, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18859837, Length=232, Percent_Identity=26.2931034482759, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27279; Mature: 27148

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTATFHDLKGASIYITGGGSGIGADLTDGFLAQGAKVAFIGRSDASAFVAQMEEKHGR
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCC
APLFLQGDITETHRLRETIAAAEKAHGPIHALVSNAANDQRHNWLETTPEEWDAYLDINL
CCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE
KAYFFAAQAVAGSMIKRGAGSIINFSSISYMMGNAGYPAYTAANGGITALTRSLARELGP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCC
DGIRVNALAPGWVLTQKQLDKWATPDGLAAHLERQCLKTHLEPRDIVDAVLFLASKTSRM
CCEEEEEECCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
MTGQCMVVDGGVVTTG
ECCEEEEEECCEEECC
>Mature Secondary Structure 
TQTATFHDLKGASIYITGGGSGIGADLTDGFLAQGAKVAFIGRSDASAFVAQMEEKHGR
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCC
APLFLQGDITETHRLRETIAAAEKAHGPIHALVSNAANDQRHNWLETTPEEWDAYLDINL
CCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE
KAYFFAAQAVAGSMIKRGAGSIINFSSISYMMGNAGYPAYTAANGGITALTRSLARELGP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCC
DGIRVNALAPGWVLTQKQLDKWATPDGLAAHLERQCLKTHLEPRDIVDAVLFLASKTSRM
CCEEEEEECCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
MTGQCMVVDGGVVTTG
ECCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]