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The map label for this gene is dgoA [H]

Identifier: 110680073

GI number: 110680073

Start: 2738217

End: 2738822

Strand: Direct

Name: dgoA [H]

Synonym: RD1_2868

Alternate gene names: 110680073

Gene position: 2738217-2738822 (Clockwise)

Preceding gene: 110680072

Following gene: 110680074

Centisome position: 66.25

GC content: 67.33

Gene sequence:

>606_bases
ATGACCTTGCCCCTGATCGCTATTCTGCGCGGTGTGACCCCGGATGAGGTCTGCGCTGTCGCGCACTGCCTGCTCGACGC
CGGGATCACCCAGATCGAGGTGCCGCTGAACTCCCCCGACCCGCTGGAGAGCATTGCCCGCCTTGCACGACAAATGGGCG
ACGCGGCACTGATCGGGGCCGGCACGGTGCTGAGCACGGATGAGGTCGCCGCAGTGGCTGACGCGGGTGGCAGGCGGGTC
GTCTCGCCCAACTGTGACACGGCCGTGATCCGCGCGACCAAGGTGCGCGATATGCAAAGCTGGCCCGGCGTGTTCACCCC
GACCGAAGCCTTTGCGGCCCTGCAGGCCGGGGCGGATGGGTTGAAACTCTTTCCCGGCTCGATGGCGGGGCCCTCGGGTC
TGTCGGCTATGCGTGCCATCCTGCCAGCGGGCACGCGCGTCTATGCCGTGGGCGGTGCCGGGCCCGACAATTTCCAGACC
TGGATTGATGCCAGCGCGGATGGGTTCGGGCTGGGCTCTGCCCTGTTCAAACCCGGCATGAGCGTGCAGGAGGTTGCGCA
AAACGCCCGCGCCATTGTCGCGGCCTATCGAGATGCCGCACCATGA

Upstream 100 bases:

>100_bases
GCGCGCTGAGCGCGCAGGGCGTGCCTGCCACCATGGTCGATACCGAACGCGCCACTCTGGCGGGGTTAACCGCCGTCCAC
CGTCAATTGAAAGCCTGCAT

Downstream 100 bases:

>100_bases
TGACGCCGGTCCATGACGCCGGCGTCTGCACAGCCGGGGAAGGCCCGCCTGCGCCCCCACTGCGCCAGCGCTTGCTTCGG
GTTGCCGGTGTGTGGGATCG

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTLPLIAILRGVTPDEVCAVAHCLLDAGITQIEVPLNSPDPLESIARLARQMGDAALIGAGTVLSTDEVAAVADAGGRRV
VSPNCDTAVIRATKVRDMQSWPGVFTPTEAFAALQAGADGLKLFPGSMAGPSGLSAMRAILPAGTRVYAVGGAGPDNFQT
WIDASADGFGLGSALFKPGMSVQEVAQNARAIVAAYRDAAP

Sequences:

>Translated_201_residues
MTLPLIAILRGVTPDEVCAVAHCLLDAGITQIEVPLNSPDPLESIARLARQMGDAALIGAGTVLSTDEVAAVADAGGRRV
VSPNCDTAVIRATKVRDMQSWPGVFTPTEAFAALQAGADGLKLFPGSMAGPSGLSAMRAILPAGTRVYAVGGAGPDNFQT
WIDASADGFGLGSALFKPGMSVQEVAQNARAIVAAYRDAAP
>Mature_200_residues
TLPLIAILRGVTPDEVCAVAHCLLDAGITQIEVPLNSPDPLESIARLARQMGDAALIGAGTVLSTDEVAAVADAGGRRVV
SPNCDTAVIRATKVRDMQSWPGVFTPTEAFAALQAGADGLKLFPGSMAGPSGLSAMRAILPAGTRVYAVGGAGPDNFQTW
IDASADGFGLGSALFKPGMSVQEVAQNARAIVAAYRDAAP

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=197, Percent_Identity=50.253807106599, Blast_Score=184, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 20488; Mature: 20356

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPLIAILRGVTPDEVCAVAHCLLDAGITQIEVPLNSPDPLESIARLARQMGDAALIGA
CCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC
GTVLSTDEVAAVADAGGRRVVSPNCDTAVIRATKVRDMQSWPGVFTPTEAFAALQAGADG
CCEECCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
LKLFPGSMAGPSGLSAMRAILPAGTRVYAVGGAGPDNFQTWIDASADGFGLGSALFKPGM
CEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHCCCC
SVQEVAQNARAIVAAYRDAAP
CHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLPLIAILRGVTPDEVCAVAHCLLDAGITQIEVPLNSPDPLESIARLARQMGDAALIGA
CCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC
GTVLSTDEVAAVADAGGRRVVSPNCDTAVIRATKVRDMQSWPGVFTPTEAFAALQAGADG
CCEECCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
LKLFPGSMAGPSGLSAMRAILPAGTRVYAVGGAGPDNFQTWIDASADGFGLGSALFKPGM
CEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHCCCC
SVQEVAQNARAIVAAYRDAAP
CHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]