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The map label for this gene is cinA [H]

Identifier: 110679979

GI number: 110679979

Start: 2641475

End: 2641942

Strand: Direct

Name: cinA [H]

Synonym: RD1_2769

Alternate gene names: 110679979

Gene position: 2641475-2641942 (Clockwise)

Preceding gene: 110679978

Following gene: 110679981

Centisome position: 63.91

GC content: 62.61

Gene sequence:

>468_bases
ATGACGCTCGCCACTGACTTGCTGCAGGCTGCGAAGTCCAAAAACGTGATGATCGTCACAGCCGAAAGCTGCACGGGCGG
CATGGTGGCTGCGGCATTGACCGATATCGCCGGATCCTCGCTGGTGGTGGATCGCGGTTTCGTCACCTATTCGAACGCGG
CCAAGATCGACATGCTGGGCATTCGGCCTGAGACATTGGACGCGTTCGGCGCGGTATCCGAGCCCATCGCAAAGGAAATG
GCGCTTGGCGCATTGCGCGCCTCACAGGCCGGTCTTGCCATTTCCGTCACGGGGATCGCGGGGCCCGGCGGTTCAGAGCA
CAAGCCAGAGGGCCGTGTCTGTTTTGCCTGCGCATCGGATGCGACCCTGCACGTGGAAACCGTTGAGTTCGGCGCCTTGG
GCCGCGACCGCGTGCGTGCGGCTGCCCGTGATCATGCGCTGAAAATGCTCTTGTCTGCGCTGCGCTAA

Upstream 100 bases:

>100_bases
GGGGACGCGCTGGGTGTGATGCTGGACGATGTGATCGCGGGCCTGCTTGCCGCGCTTGGCGTGCTGCTGCTTGCCGGACT
TTATCACGGGATGATGTGAG

Downstream 100 bases:

>100_bases
GAGGGTGCGGTGCTGGCGTACAGGTCTTTTGCCCGCATTTCAAACGCGCGGACGATACGTTGCATCGCCTCGTTGAAAAC
CACACCGATCAATTGCTGCA

Product: competence/damage-inducible protein CinA, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTLATDLLQAAKSKNVMIVTAESCTGGMVAAALTDIAGSSLVVDRGFVTYSNAAKIDMLGIRPETLDAFGAVSEPIAKEM
ALGALRASQAGLAISVTGIAGPGGSEHKPEGRVCFACASDATLHVETVEFGALGRDRVRAAARDHALKMLLSALR

Sequences:

>Translated_155_residues
MTLATDLLQAAKSKNVMIVTAESCTGGMVAAALTDIAGSSLVVDRGFVTYSNAAKIDMLGIRPETLDAFGAVSEPIAKEM
ALGALRASQAGLAISVTGIAGPGGSEHKPEGRVCFACASDATLHVETVEFGALGRDRVRAAARDHALKMLLSALR
>Mature_154_residues
TLATDLLQAAKSKNVMIVTAESCTGGMVAAALTDIAGSSLVVDRGFVTYSNAAKIDMLGIRPETLDAFGAVSEPIAKEMA
LGALRASQAGLAISVTGIAGPGGSEHKPEGRVCFACASDATLHVETVEFGALGRDRVRAAARDHALKMLLSALR

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=155, Percent_Identity=50.9677419354839, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1787818, Length=116, Percent_Identity=38.7931034482759, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 15887; Mature: 15755

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLATDLLQAAKSKNVMIVTAESCTGGMVAAALTDIAGSSLVVDRGFVTYSNAAKIDMLG
CCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCEEEEEC
IRPETLDAFGAVSEPIAKEMALGALRASQAGLAISVTGIAGPGGSEHKPEGRVCFACASD
CCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCC
ATLHVETVEFGALGRDRVRAAARDHALKMLLSALR
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TLATDLLQAAKSKNVMIVTAESCTGGMVAAALTDIAGSSLVVDRGFVTYSNAAKIDMLG
CHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCEEEEEC
IRPETLDAFGAVSEPIAKEMALGALRASQAGLAISVTGIAGPGGSEHKPEGRVCFACASD
CCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCC
ATLHVETVEFGALGRDRVRAAARDHALKMLLSALR
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]