Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is pgpA [H]

Identifier: 110679978

GI number: 110679978

Start: 2640979

End: 2641473

Strand: Direct

Name: pgpA [H]

Synonym: RD1_2768

Alternate gene names: 110679978

Gene position: 2640979-2641473 (Clockwise)

Preceding gene: 110679977

Following gene: 110679979

Centisome position: 63.9

GC content: 63.43

Gene sequence:

>495_bases
ATGAGCGGTCTGGCCAAGATGATCGCCACCGTCCTTGGCGTGGGATATGTGCGCCCTGCCCCCGGCACATGGGGCTCTCT
CGTGGCGCTGCCTTGGGCGTGGCTTTTGCATGTGATCGGCGGGTTCCCCCTGTTGTGCCTTGGCGTGGTCGTGGCCTTTG
CCAAGGGCTGGTGGGCAACGGGCGTCATGACGAGGGGCGGTGGCGAGCATGATCCGTCGGAAATCGTGGTGGATGAACTG
GTCGGACAATGGATCGCGCTGCTGCCGTTGTCTTATGCCGCGTGGTCCATGGGGATGAATATTCTCGTCATGTGGCCCGG
CTGGATCGCGGCATTCGCCTTGTTCCGCCTGTTTGATATCTGGAAACCCGGTCCGGTCGGGTGGGCCGATCGGCGCGGGG
ACGCGCTGGGTGTGATGCTGGACGATGTGATCGCGGGCCTGCTTGCCGCGCTTGGCGTGCTGCTGCTTGCCGGACTTTAT
CACGGGATGATGTGA

Upstream 100 bases:

>100_bases
TGTCGCGCATCTCCGTTAAGGCGACCACGTCGGAACGGCTTGGCTTTACCGGCCGTGGTGAGGGGATCGCCTGCATCGCC
ACCGCGGCCCTGGTGCGCGC

Downstream 100 bases:

>100_bases
GATGACGCTCGCCACTGACTTGCTGCAGGCTGCGAAGTCCAAAAACGTGATGATCGTCACAGCCGAAAGCTGCACGGGCG
GCATGGTGGCTGCGGCATTG

Product: phosphatidylglycerophosphatase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDEL
VGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLY
HGMM

Sequences:

>Translated_164_residues
MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDEL
VGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLY
HGMM
>Mature_163_residues
SGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDELV
GQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYH
GMM

Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=162, Percent_Identity=34.5679012345679, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 17512; Mature: 17381

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWAT
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVMTRGGGEHDPSEIVVDELVGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDI
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH
WKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYHGMM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWAT
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVMTRGGGEHDPSEIVVDELVGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDI
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH
WKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYHGMM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]