Click here to switch to the map view.

The map label for this gene is 110679740

Identifier: 110679740

GI number: 110679740

Start: 2386556

End: 2387707

Strand: Direct

Name: 110679740

Synonym: RD1_2501

Alternate gene names: NA

Gene position: 2386556-2387707 (Clockwise)

Preceding gene: 110679738

Following gene: 110679741

Centisome position: 57.74

GC content: 60.42

Gene sequence:

>1152_bases
ATGTCAAAAATCCTCATCGCAGGCGGTGGGTTTGCAGGTCTCTGGGCTGCAATGGCCGCCGCTGCAACGCGGCACCGTCA
AGACGCCAATAACATCGCAATCACGCTCGTTTCGAAGGATCCGCATCTATGTATTCGACCACGTCTTTATGAAGGAGCGC
GTCCCGAAATGCTGGTCCCCTTGGAGCCCTTGCTCGAGGCGATCGATGTCGGTTTCGAAACCGCCCGGATTTCGGAAGTG
ACCCCCACCGCGTTGCACACCAGACAGGGTGTCACCATGGAGCATGATCGCATGATCCTTGCCATGGGCAGCCATGTATC
GATCCCCGCTGTGCCCGGCGCGGCGGTGCACGGCTTTACCGTGGATGCCTATAAACAGACGGAACACCTCGATGCGCATC
TCTCCAAGCTGGACATCGCAGCGCCCGGCGCATCCGGGTTTGTCGTCGTGGGCGCGAGTTTCAGCGGGCTTGAAATCGCA
ACATCTCTGCGTGATCGCCTCGGGTCTGATCCCGAAATCTACCTGATTGATCGGCAGGACATTCCGGGCCAGTCGCTTGG
AAACAGCCTGACCCTCGAAATCACGTCTGCGCTTGAAAAAGCGAACATTCAGTTTCTGGGGGGTGACTCCGTGACCTACG
TCACGGCGGATCGCGTCATCCTGCATTCGGGCAAGGTGATCGACGCCGCGACCACGATTTTCGCAACCGGCCTGCAGCCT
TCCCCCCTGGTCAAAGACATTGGCGTTCACGCGGGCGACGGGCGGCTGCGGCTTGACCGGAACCTCCGGGTCGTCGGTGA
GACAGGTTTATTTGCCGCTGGCGACATCGGAGTTGCCGCAGCGGATGCCACACACATGACGCTGATGTCGTGCCAACATG
CGAGGCCCATGGGCGTTGTGGCCGGCCAGAATGCCGTGCTTGATCTGCTGGGACAGGACCTGCGGCCCTATGCGCAGCCT
GACTACGCGACCTGTATCAGCCTCGGTGCGTCCAACGCCGTTTTCACCCAAGGCTGGGACAGGACCATCGCCAAGACCGG
GACAGAAGGTGCCGCGATAAAAACGCAGATCAACGAAACGTGGATCTATCCCCCCAGTCCTGACGCGGGCCGCGAAGCGA
TCTTCGACGCCATCGTGCCGACACGGCCATGA

Upstream 100 bases:

>100_bases
TCTTATTCTCATTTTTGCGATTCAGAGTCACGAAAATGCTCGTGTACTCGCATTCGTGCAAGGGGTATTCGATCGACCAG
AAACAACAGGTTAGATCAAA

Downstream 100 bases:

>100_bases
TGGCGGGAAAACGCGCGTATCCCTTCAATCAAACACCCTTCAACGAGGTCAGACATGACAGATACAAAAACAATTCTCAT
TACCGGCGCAAGCCGCGGTA

Product: pyridine nucleotide-disulphide oxidoreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSKILIAGGGFAGLWAAMAAAATRHRQDANNIAITLVSKDPHLCIRPRLYEGARPEMLVPLEPLLEAIDVGFETARISEV
TPTALHTRQGVTMEHDRMILAMGSHVSIPAVPGAAVHGFTVDAYKQTEHLDAHLSKLDIAAPGASGFVVVGASFSGLEIA
TSLRDRLGSDPEIYLIDRQDIPGQSLGNSLTLEITSALEKANIQFLGGDSVTYVTADRVILHSGKVIDAATTIFATGLQP
SPLVKDIGVHAGDGRLRLDRNLRVVGETGLFAAGDIGVAAADATHMTLMSCQHARPMGVVAGQNAVLDLLGQDLRPYAQP
DYATCISLGASNAVFTQGWDRTIAKTGTEGAAIKTQINETWIYPPSPDAGREAIFDAIVPTRP

Sequences:

>Translated_383_residues
MSKILIAGGGFAGLWAAMAAAATRHRQDANNIAITLVSKDPHLCIRPRLYEGARPEMLVPLEPLLEAIDVGFETARISEV
TPTALHTRQGVTMEHDRMILAMGSHVSIPAVPGAAVHGFTVDAYKQTEHLDAHLSKLDIAAPGASGFVVVGASFSGLEIA
TSLRDRLGSDPEIYLIDRQDIPGQSLGNSLTLEITSALEKANIQFLGGDSVTYVTADRVILHSGKVIDAATTIFATGLQP
SPLVKDIGVHAGDGRLRLDRNLRVVGETGLFAAGDIGVAAADATHMTLMSCQHARPMGVVAGQNAVLDLLGQDLRPYAQP
DYATCISLGASNAVFTQGWDRTIAKTGTEGAAIKTQINETWIYPPSPDAGREAIFDAIVPTRP
>Mature_382_residues
SKILIAGGGFAGLWAAMAAAATRHRQDANNIAITLVSKDPHLCIRPRLYEGARPEMLVPLEPLLEAIDVGFETARISEVT
PTALHTRQGVTMEHDRMILAMGSHVSIPAVPGAAVHGFTVDAYKQTEHLDAHLSKLDIAAPGASGFVVVGASFSGLEIAT
SLRDRLGSDPEIYLIDRQDIPGQSLGNSLTLEITSALEKANIQFLGGDSVTYVTADRVILHSGKVIDAATTIFATGLQPS
PLVKDIGVHAGDGRLRLDRNLRVVGETGLFAAGDIGVAAADATHMTLMSCQHARPMGVVAGQNAVLDLLGQDLRPYAQPD
YATCISLGASNAVFTQGWDRTIAKTGTEGAAIKTQINETWIYPPSPDAGREAIFDAIVPTRP

Specific function: Unknown

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 40480; Mature: 40348

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILIAGGGFAGLWAAMAAAATRHRQDANNIAITLVSKDPHLCIRPRLYEGARPEMLVP
CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCEECC
LEPLLEAIDVGFETARISEVTPTALHTRQGVTMEHDRMILAMGSHVSIPAVPGAAVHGFT
HHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCEECCEEEEEECCCEECCCCCCCEEECEE
VDAYKQTEHLDAHLSKLDIAAPGASGFVVVGASFSGLEIATSLRDRLGSDPEIYLIDRQD
EEHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCC
IPGQSLGNSLTLEITSALEKANIQFLGGDSVTYVTADRVILHSGKVIDAATTIFATGLQP
CCCHHCCCEEEEEEEHHHHHCCEEEECCCEEEEEEECEEEEECCCEEEHHHEEEECCCCC
SPLVKDIGVHAGDGRLRLDRNLRVVGETGLFAAGDIGVAAADATHMTLMSCQHARPMGVV
CCCHHHCCCCCCCCEEEEECCEEEEECCCCEEECCCCEEECCCHHHHHHHHCCCCCCEEE
AGQNAVLDLLGQDLRPYAQPDYATCISLGASNAVFTQGWDRTIAKTGTEGAAIKTQINET
ECCHHHHHHHCCCCCCCCCCCHHHHEECCCCCCEEECCCCHHHHHCCCCCCEEEEECCEE
WIYPPSPDAGREAIFDAIVPTRP
EEECCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SKILIAGGGFAGLWAAMAAAATRHRQDANNIAITLVSKDPHLCIRPRLYEGARPEMLVP
CEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCEECC
LEPLLEAIDVGFETARISEVTPTALHTRQGVTMEHDRMILAMGSHVSIPAVPGAAVHGFT
HHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCEECCEEEEEECCCEECCCCCCCEEECEE
VDAYKQTEHLDAHLSKLDIAAPGASGFVVVGASFSGLEIATSLRDRLGSDPEIYLIDRQD
EEHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCC
IPGQSLGNSLTLEITSALEKANIQFLGGDSVTYVTADRVILHSGKVIDAATTIFATGLQP
CCCHHCCCEEEEEEEHHHHHCCEEEECCCEEEEEEECEEEEECCCEEEHHHEEEECCCCC
SPLVKDIGVHAGDGRLRLDRNLRVVGETGLFAAGDIGVAAADATHMTLMSCQHARPMGVV
CCCHHHCCCCCCCCEEEEECCEEEEECCCCEEECCCCEEECCCHHHHHHHHCCCCCCEEE
AGQNAVLDLLGQDLRPYAQPDYATCISLGASNAVFTQGWDRTIAKTGTEGAAIKTQINET
ECCHHHHHHHCCCCCCCCCCCHHHHEECCCCCCEEECCCCHHHHHCCCCCCEEEEECCEE
WIYPPSPDAGREAIFDAIVPTRP
EEECCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]