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The map label for this gene is 110679629

Identifier: 110679629

GI number: 110679629

Start: 2269554

End: 2270594

Strand: Reverse

Name: 110679629

Synonym: RD1_2380

Alternate gene names: NA

Gene position: 2270594-2269554 (Counterclockwise)

Preceding gene: 110679630

Following gene: 110679628

Centisome position: 54.94

GC content: 61.19

Gene sequence:

>1041_bases
ATGCTGAAACGTCACTTCATGGCCCTTGCGAGCGCGGCAGGCCTTGCGCTTGGCGCTGGCGTCGCCGGGGCACAGGATGC
CCCTGCACCTCTGGACAACCCAGAGGACGTCACCATTGCGCTTGTGCGCTATCTCTCCACGGGGGATTTCTTTCAGGCCT
ACCTGTCCGGTGTCGAAACGCAGGCCGCCGCTCTTGGCGTCAACCTGCGCGTTTTCGACAGCCGTCAGGATGCTGCGCTT
CAGGCTGATATGGTGGAACAGGCCATCGCCCTTGGTGTGGACGGGATCATCATCCAGCACGGGTTGACCGAGTCCATGCG
CGACGCGGCACAGCGCGCTGTGGATGCCGGGATCAAGGTGGTTGCCTTTGACGTGAATGTCGAAAACGATGCCATTCCGC
AGATTGAACAATCCGATTACCTGCTGGGCAAACTGGCGCTGGAACAGGCGATCAAGGACAATGGCGACAGCTTTTCCGCA
GGCTACGTCTATGTGCCGGGCATCGCGCCGCTTGATCGTCGTCATGTCGCCTGGGAAGAAGTGAAGGCCGCCAACGCCGG
CATAACCGAGGCCGCACGCATCGGCACGCTCGACAACCCGATTGCCAATTCCAACGCCAATCAGGCACGCGCGGCGCTTC
AGGCCAACCCCGGCATTTCGGTCTTTTTCGCACCCTATAATGAATTCGCCAAAGGCGTTAAGATTGCCGCGGACGAATTG
GGCGTCAGCACGAACATGTCCATCTATTCGGCCGATATCTCGACGGCCGACATTGCCCTGATGCGCGAACCCGACAGCGC
GTGGAAAGCCACCGTTGCCACGAACCCTGCCGTGGTCGGCGAGGTATCAGTGCGCGCGCTGGCCCTGATGCTGGTGGGCG
AAGATCCCGGCGCTTCGGTCATCGTGCCGCCGACCCTCATCACGCAGGCCTTCCTGAACGACAACAACATCCGCAATATG
GAAGATCTGGGCGTCAAGATGCCCCAGTTCCAGCATGCCGATGTGGCGATGGCCGACTGGATGCCCCTGCCCGCGCGGTA
A

Upstream 100 bases:

>100_bases
AAGGGGGCCGTTCTGGTGGTGGCCCTTGTGTTCACCTTTTACCTATCCTCGCGCCGCACCGGCACGGGGCACTGATCATC
AGCAATAGGGAGGACTATAT

Downstream 100 bases:

>100_bases
GGCTGATCCTCCCGGCCCCATCGCCTTGGGGCCGGGAGACCTGAAAGACCAAAGCAGTGCGCGCCGTCAGACCAGCGCTG
TGCCGGATCACTCTCCTCCA

Product: sugar ABC transporter, substrate-binding protein, putative

Products: NA

Alternate protein names: Transport System Protein; Ribose ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLKRHFMALASAAGLALGAGVAGAQDAPAPLDNPEDVTIALVRYLSTGDFFQAYLSGVETQAAALGVNLRVFDSRQDAAL
QADMVEQAIALGVDGIIIQHGLTESMRDAAQRAVDAGIKVVAFDVNVENDAIPQIEQSDYLLGKLALEQAIKDNGDSFSA
GYVYVPGIAPLDRRHVAWEEVKAANAGITEAARIGTLDNPIANSNANQARAALQANPGISVFFAPYNEFAKGVKIAADEL
GVSTNMSIYSADISTADIALMREPDSAWKATVATNPAVVGEVSVRALALMLVGEDPGASVIVPPTLITQAFLNDNNIRNM
EDLGVKMPQFQHADVAMADWMPLPAR

Sequences:

>Translated_346_residues
MLKRHFMALASAAGLALGAGVAGAQDAPAPLDNPEDVTIALVRYLSTGDFFQAYLSGVETQAAALGVNLRVFDSRQDAAL
QADMVEQAIALGVDGIIIQHGLTESMRDAAQRAVDAGIKVVAFDVNVENDAIPQIEQSDYLLGKLALEQAIKDNGDSFSA
GYVYVPGIAPLDRRHVAWEEVKAANAGITEAARIGTLDNPIANSNANQARAALQANPGISVFFAPYNEFAKGVKIAADEL
GVSTNMSIYSADISTADIALMREPDSAWKATVATNPAVVGEVSVRALALMLVGEDPGASVIVPPTLITQAFLNDNNIRNM
EDLGVKMPQFQHADVAMADWMPLPAR
>Mature_346_residues
MLKRHFMALASAAGLALGAGVAGAQDAPAPLDNPEDVTIALVRYLSTGDFFQAYLSGVETQAAALGVNLRVFDSRQDAAL
QADMVEQAIALGVDGIIIQHGLTESMRDAAQRAVDAGIKVVAFDVNVENDAIPQIEQSDYLLGKLALEQAIKDNGDSFSA
GYVYVPGIAPLDRRHVAWEEVKAANAGITEAARIGTLDNPIANSNANQARAALQANPGISVFFAPYNEFAKGVKIAADEL
GVSTNMSIYSADISTADIALMREPDSAWKATVATNPAVVGEVSVRALALMLVGEDPGASVIVPPTLITQAFLNDNNIRNM
EDLGVKMPQFQHADVAMADWMPLPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36514; Mature: 36514

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRHFMALASAAGLALGAGVAGAQDAPAPLDNPEDVTIALVRYLSTGDFFQAYLSGVET
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHH
QAAALGVNLRVFDSRQDAALQADMVEQAIALGVDGIIIQHGLTESMRDAAQRAVDAGIKV
HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEE
VAFDVNVENDAIPQIEQSDYLLGKLALEQAIKDNGDSFSAGYVYVPGIAPLDRRHVAWEE
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHH
VKAANAGITEAARIGTLDNPIANSNANQARAALQANPGISVFFAPYNEFAKGVKIAADEL
HHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHCCCEEEHHHC
GVSTNMSIYSADISTADIALMREPDSAWKATVATNPAVVGEVSVRALALMLVGEDPGASV
CCCCCCEEEECCCCCEEEEEEECCCHHHEEEEECCCEEEEHHHHEEEEEEEEECCCCCEE
IVPPTLITQAFLNDNNIRNMEDLGVKMPQFQHADVAMADWMPLPAR
EECHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEHHCCCCCCCC
>Mature Secondary Structure
MLKRHFMALASAAGLALGAGVAGAQDAPAPLDNPEDVTIALVRYLSTGDFFQAYLSGVET
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHH
QAAALGVNLRVFDSRQDAALQADMVEQAIALGVDGIIIQHGLTESMRDAAQRAVDAGIKV
HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEE
VAFDVNVENDAIPQIEQSDYLLGKLALEQAIKDNGDSFSAGYVYVPGIAPLDRRHVAWEE
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHH
VKAANAGITEAARIGTLDNPIANSNANQARAALQANPGISVFFAPYNEFAKGVKIAADEL
HHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHCCCEEEHHHC
GVSTNMSIYSADISTADIALMREPDSAWKATVATNPAVVGEVSVRALALMLVGEDPGASV
CCCCCCEEEECCCCCEEEEEEECCCHHHEEEEECCCEEEEHHHHEEEEEEEEECCCCCEE
IVPPTLITQAFLNDNNIRNMEDLGVKMPQFQHADVAMADWMPLPAR
EECHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA