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The map label for this gene is yhdH [H]

Identifier: 110679551

GI number: 110679551

Start: 2183446

End: 2184438

Strand: Direct

Name: yhdH [H]

Synonym: RD1_2290

Alternate gene names: 110679551

Gene position: 2183446-2184438 (Clockwise)

Preceding gene: 110679550

Following gene: 110679553

Centisome position: 52.83

GC content: 64.75

Gene sequence:

>993_bases
ATGTTTAAGGCGCTTGTGGTCAACAAGGACGAAGAGAGCGGCAAGACCTCCGCTGCGGTCGAAGAGATGACCCTCGACCA
ACTGCCCGCGGGCGATGTCACGGTTGCGGTCGAATACTCGACAGTGAACTATAAGGACGGGCTGTGCATCGGGCCCGGTG
GCGGGCTTGTGCGCAACTATCCGCATGTGCCGGGGATCGATTTCGCCGGCACTGTCGAGACGTCCGAGGATGCCCGTTAT
GCGCCCGGCGACAAGGTCGTGCTGACAGGCTGGCGCGTGGGAGAGGCGCATTGGGGCGGCTACGGCCAAAAGGCGCGCGT
CAAGGCCGATTGGCTGGTGCCATTGCCCGCCGGTCTGGACACGCGGCAAGCCATGGCGGTAGGGACCGCCGGGTTTACCT
CGATGTTGGCAGTCATGGCGCTGGAAGATCACGGTCTGACACCGGGCAACGGGCCGGTGCTGGTCACCGGTGCTGCGGGC
GGCGTCGGGTCGGTCGCGGTCGCGATCCTCGCAAACCTCGGTTACGAGGTCGCTGGCGTGACCGGACGGCCCGAAACCGC
AGATTACATCAAATCGCTGGGTGCGGCGCAGATCGTCGCGCGTGACGAGATCAACGAAACCGTCAAACGCCCGCTCGAGG
CCGAAACATGGGCTGGCTGCGTCGATGCGGTAGGCGGTGCCATGCTTGCGCGGGTGCTGGGGCAGATGAAATACGGGGCG
TCGGTCTCTGCGGTCGGATTGGCCGGGGGGGCGGGGCTGCCTGCCACGGTGATCCCGTTCCTGTTGCGCGGTGTGAACCT
GCTGGGCATTGATTCCGTCATGCAGCCCTATGACAACCGGGTCCGCGCCTGGGAGCGGATCGCGCGTGATCTGCCGATGG
ACAAGCTCGAAGCGATGGTGCAGCCCGCAACACTTGCCGATCTGCCCAAGCTCGGCAGTGATATCCTCAAAGGTCAGGTC
AAGGGCCGCGTGGTCGTAGACGTCAACGCCTGA

Upstream 100 bases:

>100_bases
AGGCCGGTTTCTGGCACTGATGGTTTTTGCTTTTGCCGGGCTTTCCGGCAGGGGCGTTCAACACCAACGACAGGGGCAAG
TCCCCGGATAGGAGAGAGAC

Downstream 100 bases:

>100_bases
AATCCAGTGTGAACGTATGGCCCGGTAGCCAAGGACAAGGCCTACGCGCGGGCAAAGCGTACACATCCGATGAAAAAGCG
CGTCACGGTGTGGCGCGCTT

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MFKALVVNKDEESGKTSAAVEEMTLDQLPAGDVTVAVEYSTVNYKDGLCIGPGGGLVRNYPHVPGIDFAGTVETSEDARY
APGDKVVLTGWRVGEAHWGGYGQKARVKADWLVPLPAGLDTRQAMAVGTAGFTSMLAVMALEDHGLTPGNGPVLVTGAAG
GVGSVAVAILANLGYEVAGVTGRPETADYIKSLGAAQIVARDEINETVKRPLEAETWAGCVDAVGGAMLARVLGQMKYGA
SVSAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYDNRVRAWERIARDLPMDKLEAMVQPATLADLPKLGSDILKGQV
KGRVVVDVNA

Sequences:

>Translated_330_residues
MFKALVVNKDEESGKTSAAVEEMTLDQLPAGDVTVAVEYSTVNYKDGLCIGPGGGLVRNYPHVPGIDFAGTVETSEDARY
APGDKVVLTGWRVGEAHWGGYGQKARVKADWLVPLPAGLDTRQAMAVGTAGFTSMLAVMALEDHGLTPGNGPVLVTGAAG
GVGSVAVAILANLGYEVAGVTGRPETADYIKSLGAAQIVARDEINETVKRPLEAETWAGCVDAVGGAMLARVLGQMKYGA
SVSAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYDNRVRAWERIARDLPMDKLEAMVQPATLADLPKLGSDILKGQV
KGRVVVDVNA
>Mature_330_residues
MFKALVVNKDEESGKTSAAVEEMTLDQLPAGDVTVAVEYSTVNYKDGLCIGPGGGLVRNYPHVPGIDFAGTVETSEDARY
APGDKVVLTGWRVGEAHWGGYGQKARVKADWLVPLPAGLDTRQAMAVGTAGFTSMLAVMALEDHGLTPGNGPVLVTGAAG
GVGSVAVAILANLGYEVAGVTGRPETADYIKSLGAAQIVARDEINETVKRPLEAETWAGCVDAVGGAMLARVLGQMKYGA
SVSAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYDNRVRAWERIARDLPMDKLEAMVQPATLADLPKLGSDILKGQV
KGRVVVDVNA

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=320, Percent_Identity=53.4375, Blast_Score=358, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6323961, Length=239, Percent_Identity=26.7782426778243, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34265; Mature: 34265

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKALVVNKDEESGKTSAAVEEMTLDQLPAGDVTVAVEYSTVNYKDGLCIGPGGGLVRNY
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEECCCCCCCCCC
PHVPGIDFAGTVETSEDARYAPGDKVVLTGWRVGEAHWGGYGQKARVKADWLVPLPAGLD
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCC
TRQAMAVGTAGFTSMLAVMALEDHGLTPGNGPVLVTGAAGGVGSVAVAILANLGYEVAGV
CHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
TGRPETADYIKSLGAAQIVARDEINETVKRPLEAETWAGCVDAVGGAMLARVLGQMKYGA
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVSAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYDNRVRAWERIARDLPMDKLEAMV
CEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QPATLADLPKLGSDILKGQVKGRVVVDVNA
CCHHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MFKALVVNKDEESGKTSAAVEEMTLDQLPAGDVTVAVEYSTVNYKDGLCIGPGGGLVRNY
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEECCCCCCCCCC
PHVPGIDFAGTVETSEDARYAPGDKVVLTGWRVGEAHWGGYGQKARVKADWLVPLPAGLD
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCC
TRQAMAVGTAGFTSMLAVMALEDHGLTPGNGPVLVTGAAGGVGSVAVAILANLGYEVAGV
CHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
TGRPETADYIKSLGAAQIVARDEINETVKRPLEAETWAGCVDAVGGAMLARVLGQMKYGA
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVSAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYDNRVRAWERIARDLPMDKLEAMV
CEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QPATLADLPKLGSDILKGQVKGRVVVDVNA
CCHHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]