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The map label for this gene is 110679547

Identifier: 110679547

GI number: 110679547

Start: 2180255

End: 2181043

Strand: Direct

Name: 110679547

Synonym: RD1_2284

Alternate gene names: NA

Gene position: 2180255-2181043 (Clockwise)

Preceding gene: 110679540

Following gene: 110679548

Centisome position: 52.75

GC content: 60.33

Gene sequence:

>789_bases
GTGCACGGTATTATGCGCTCCACCCTCTGGCTTGGTTTTTTCGGTGCCATTCTGGCGGCGTGGTGGGTGATGTATGCGAT
GGCGATTGACATGGATGTGGATATGCTGGGGCGTCCGGGTGAAATGGGCGCGCGTATGGCCGCGATGGATCCGCGCATGC
CGATGTATATGCCGATGGCGAACTTCGGGCCGCTGTTCTGGATGTGGGCCGTGATGATGGCGGCGATGATGCTGCCGACG
CTGGTGCCGACGCTGCGCGCCTATGAGGACCTGATGACCAGTGCCACGGGCACGCGGGCCGGGTGGTCCGGCGTGCTGCT
GGGATATTTCATCGTCTGGGTTGCCTTTGCCGCGCTGATCACGGGGGTGCAGCTGGCGCTGCTGTTTGGCGGCGTGATTG
ACATGCTGGGCATCGCGAAAAGCCCTTGGGTGGCAGGGGGCTTGCTGATCCTTGTGGGAGCTTTCCAGTTCACCCGCACC
AAGGAGGTTTGCCATGGCGTATGTCATTCCCCGATGATGTATTTTCTGGGCCATTGGCGGACGGGTTTCGCGGGGGGCTT
GCGCATGGGGCTGGGACTTGGTGCCTTTTGCGTGGGATGTTGTTGGGGGTTCATGGCGCTTGGCTTTGTCGGCGGCGTGA
TGAACCTTGCATGGATGGGTCTTGCGACACTGTTCATGGTCATCGAAAAACTGCCCCAGATCGGGCATTACGTCACAAAA
CCAATGGGGTTTGTCCTGATCATCGCGGGGATCGCGGTGTTGGGCTGGCCCGTCTTTTCGGGAGGATAA

Upstream 100 bases:

>100_bases
TCGGCTGGGTTTTCAGGATCAATTTTCATATGTCTTACATTTAGTGTTTGCCCGTTTTCTAATTGTCTGGCATTTGAAGT
GCAAGGAAAAGGAATCCCCC

Downstream 100 bases:

>100_bases
GGCATGGCGAAGAACAGAAGGGCGGATGCGGATCGGTTGCCGATCAGTCAGCGCATTGATCAACGAATGCCGAACCCGAA
GCGTCGGCAAAGCAGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MHGIMRSTLWLGFFGAILAAWWVMYAMAIDMDVDMLGRPGEMGARMAAMDPRMPMYMPMANFGPLFWMWAVMMAAMMLPT
LVPTLRAYEDLMTSATGTRAGWSGVLLGYFIVWVAFAALITGVQLALLFGGVIDMLGIAKSPWVAGGLLILVGAFQFTRT
KEVCHGVCHSPMMYFLGHWRTGFAGGLRMGLGLGAFCVGCCWGFMALGFVGGVMNLAWMGLATLFMVIEKLPQIGHYVTK
PMGFVLIIAGIAVLGWPVFSGG

Sequences:

>Translated_262_residues
MHGIMRSTLWLGFFGAILAAWWVMYAMAIDMDVDMLGRPGEMGARMAAMDPRMPMYMPMANFGPLFWMWAVMMAAMMLPT
LVPTLRAYEDLMTSATGTRAGWSGVLLGYFIVWVAFAALITGVQLALLFGGVIDMLGIAKSPWVAGGLLILVGAFQFTRT
KEVCHGVCHSPMMYFLGHWRTGFAGGLRMGLGLGAFCVGCCWGFMALGFVGGVMNLAWMGLATLFMVIEKLPQIGHYVTK
PMGFVLIIAGIAVLGWPVFSGG
>Mature_262_residues
MHGIMRSTLWLGFFGAILAAWWVMYAMAIDMDVDMLGRPGEMGARMAAMDPRMPMYMPMANFGPLFWMWAVMMAAMMLPT
LVPTLRAYEDLMTSATGTRAGWSGVLLGYFIVWVAFAALITGVQLALLFGGVIDMLGIAKSPWVAGGLLILVGAFQFTRT
KEVCHGVCHSPMMYFLGHWRTGFAGGLRMGLGLGAFCVGCCWGFMALGFVGGVMNLAWMGLATLFMVIEKLPQIGHYVTK
PMGFVLIIAGIAVLGWPVFSGG

Specific function: Unknown

COG id: COG5486

COG function: function code S; Predicted metal-binding integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28425; Mature: 28425

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
10.7 %Met     (Translated Protein)
12.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
10.7 %Met     (Mature Protein)
12.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA