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The map label for this gene is 110679540

Identifier: 110679540

GI number: 110679540

Start: 2174932

End: 2175486

Strand: Direct

Name: 110679540

Synonym: RD1_2275

Alternate gene names: NA

Gene position: 2174932-2175486 (Clockwise)

Preceding gene: 110679539

Following gene: 110679547

Centisome position: 52.62

GC content: 56.58

Gene sequence:

>555_bases
ATGAACCGTCAGTTCTTGCCACGTCACTTGGTGTTGGCCTGTGGTGCATTGATCATGGGCCTGTTGCTGACGGCCACTGC
CGTGCATGCCGATATTTCCCGTTTTGTCGGCAGCTACGTTGGTGCAGCGGACGTGCAGTCTGCGGATGGAACCAGCCGCC
CCCGCGACATGAGCGTCAAGATATCGCAAACCAAGGAGGGGTTTCGCGTCTATTGGAAATCGACGACCTACCGCAAGGAT
GGCACCGCCAAGGAAAAGGCCTATACCATTGATTTCGTGCCAAGCGCGCGCCCGGGTGTTTACGCTTCCGCGATGAAGCG
CAACGTTTTCGGTCATGCCGCACAGCTTGATCCGATGAAGGGCGAACCCTACGTCTGGGGGCGCATCGACGGGGAGACGC
TGAGCGTTTATTCGATGTATGTCACCGAAGATGGCGGCTATGAAATCCAGCAGTTTGACCGTTCACTGGCATCACGCGGC
CTGATGCTCGACTTCCAAACCATTAGGGACGGTGAAATCCAGCGGACGGTGTCAACGCTGTTGAAACGGGAATAA

Upstream 100 bases:

>100_bases
GGGCATTGTTTGCCAAACCAAAGGAATTATCTGATAGGGTTGTGAAACCGTCCGGCTTGTGGTCGTGCGGTCAAAACGCC
AAAGCCTCGGAGGATTTTGA

Downstream 100 bases:

>100_bases
CGCGCGTTTACTTGCGGAAACTGTCCAGTGAGACGATCTCGGCGTCCTTTGCACCGTCTTTTGCCGGTGCTGCCTCCGCT
TTGGGTTTTTCAACCTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNRQFLPRHLVLACGALIMGLLLTATAVHADISRFVGSYVGAADVQSADGTSRPRDMSVKISQTKEGFRVYWKSTTYRKD
GTAKEKAYTIDFVPSARPGVYASAMKRNVFGHAAQLDPMKGEPYVWGRIDGETLSVYSMYVTEDGGYEIQQFDRSLASRG
LMLDFQTIRDGEIQRTVSTLLKRE

Sequences:

>Translated_184_residues
MNRQFLPRHLVLACGALIMGLLLTATAVHADISRFVGSYVGAADVQSADGTSRPRDMSVKISQTKEGFRVYWKSTTYRKD
GTAKEKAYTIDFVPSARPGVYASAMKRNVFGHAAQLDPMKGEPYVWGRIDGETLSVYSMYVTEDGGYEIQQFDRSLASRG
LMLDFQTIRDGEIQRTVSTLLKRE
>Mature_184_residues
MNRQFLPRHLVLACGALIMGLLLTATAVHADISRFVGSYVGAADVQSADGTSRPRDMSVKISQTKEGFRVYWKSTTYRKD
GTAKEKAYTIDFVPSARPGVYASAMKRNVFGHAAQLDPMKGEPYVWGRIDGETLSVYSMYVTEDGGYEIQQFDRSLASRG
LMLDFQTIRDGEIQRTVSTLLKRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20530; Mature: 20530

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQFLPRHLVLACGALIMGLLLTATAVHADISRFVGSYVGAADVQSADGTSRPRDMSVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
ISQTKEGFRVYWKSTTYRKDGTAKEKAYTIDFVPSARPGVYASAMKRNVFGHAAQLDPMK
EECCCCCEEEEEECCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCC
GEPYVWGRIDGETLSVYSMYVTEDGGYEIQQFDRSLASRGLMLDFQTIRDGEIQRTVSTL
CCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
LKRE
HCCC
>Mature Secondary Structure
MNRQFLPRHLVLACGALIMGLLLTATAVHADISRFVGSYVGAADVQSADGTSRPRDMSVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
ISQTKEGFRVYWKSTTYRKDGTAKEKAYTIDFVPSARPGVYASAMKRNVFGHAAQLDPMK
EECCCCCEEEEEECCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCC
GEPYVWGRIDGETLSVYSMYVTEDGGYEIQQFDRSLASRGLMLDFQTIRDGEIQRTVSTL
CCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
LKRE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA