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The map label for this gene is 110679548

Identifier: 110679548

GI number: 110679548

Start: 2181047

End: 2181754

Strand: Direct

Name: 110679548

Synonym: RD1_2286

Alternate gene names: NA

Gene position: 2181047-2181754 (Clockwise)

Preceding gene: 110679547

Following gene: 110679549

Centisome position: 52.77

GC content: 61.02

Gene sequence:

>708_bases
ATGGCGAAGAACAGAAGGGCGGATGCGGATCGGTTGCCGATCAGTCAGCGCATTGATCAACGAATGCCGAACCCGAAGCG
TCGGCAAAGCAGCCCGACCGAATGGGCGATCAAGGGCGAGTTGTTTCTCAACTGCTCCTGCACGGTATTTTGTCCCTGTG
TCGTCAGCCTTGGCGCACACCCGCCCACCGAGGGGCATTGTCATGCGTGGATGGCCATCGCCATCGACGAAGGGCACTTT
GAGGGCGAAGACCTCGCCGGCCTCAATATCGGTCTGCTCGTGGACATCCCCGGTCGCATGGGGGAGGGCAACTGGAAGGT
TGCCGCCTATGTGGATGAACGCGCCAGTGGCAAGGCCTATAACGGTATCCTGCAGATCTTTTCGGGTGCTGCGGGCGGCA
CCACGGGGCTGTTCACCATGCTGGTCAGCGAGATCATCGGCGCGGAACGTGCGCCGGTTGAGATCGTGCGCGAGGGCAAC
CGCCGCTCCATCATGATCGGGCGCAAGATACAGGGCGAGATCGAGATGCTGGCGGGCAAGGATCCGGAGCATCCGGTGAT
GGTCAGCAATTCCAAATACTGGATGGGTCCGGATATCATCGCGGCCACGGGGCTCAAAAGCCGGGTGCGGGATTATGGCC
GCGTCTGGGACTTTGGCGGTAAATCGGCGGAAATCTGTCCGATCGACTGGAAAGGCCCCAAGCCGTGA

Upstream 100 bases:

>100_bases
GCCCCAGATCGGGCATTACGTCACAAAACCAATGGGGTTTGTCCTGATCATCGCGGGGATCGCGGTGTTGGGCTGGCCCG
TCTTTTCGGGAGGATAAGGC

Downstream 100 bases:

>100_bases
TCGACTCGCGCTATGTGCAAACCATGGCGCGCTACAACAGCTGGCAGAACAACCAACTGATGCCGGTGTTGGAGGCCATG
TCGCATGCAGAGCTGACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAKNRRADADRLPISQRIDQRMPNPKRRQSSPTEWAIKGELFLNCSCTVFCPCVVSLGAHPPTEGHCHAWMAIAIDEGHF
EGEDLAGLNIGLLVDIPGRMGEGNWKVAAYVDERASGKAYNGILQIFSGAAGGTTGLFTMLVSEIIGAERAPVEIVREGN
RRSIMIGRKIQGEIEMLAGKDPEHPVMVSNSKYWMGPDIIAATGLKSRVRDYGRVWDFGGKSAEICPIDWKGPKP

Sequences:

>Translated_235_residues
MAKNRRADADRLPISQRIDQRMPNPKRRQSSPTEWAIKGELFLNCSCTVFCPCVVSLGAHPPTEGHCHAWMAIAIDEGHF
EGEDLAGLNIGLLVDIPGRMGEGNWKVAAYVDERASGKAYNGILQIFSGAAGGTTGLFTMLVSEIIGAERAPVEIVREGN
RRSIMIGRKIQGEIEMLAGKDPEHPVMVSNSKYWMGPDIIAATGLKSRVRDYGRVWDFGGKSAEICPIDWKGPKP
>Mature_234_residues
AKNRRADADRLPISQRIDQRMPNPKRRQSSPTEWAIKGELFLNCSCTVFCPCVVSLGAHPPTEGHCHAWMAIAIDEGHFE
GEDLAGLNIGLLVDIPGRMGEGNWKVAAYVDERASGKAYNGILQIFSGAAGGTTGLFTMLVSEIIGAERAPVEIVREGNR
RSIMIGRKIQGEIEMLAGKDPEHPVMVSNSKYWMGPDIIAATGLKSRVRDYGRVWDFGGKSAEICPIDWKGPKP

Specific function: Unknown

COG id: COG5588

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25703; Mature: 25572

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNRRADADRLPISQRIDQRMPNPKRRQSSPTEWAIKGELFLNCSCTVFCPCVVSLGAH
CCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCEEEEEEEEEECCHHEEHHHHHHCCCC
PPTEGHCHAWMAIAIDEGHFEGEDLAGLNIGLLVDIPGRMGEGNWKVAAYVDERASGKAY
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHH
NGILQIFSGAAGGTTGLFTMLVSEIIGAERAPVEIVREGNRRSIMIGRKIQGEIEMLAGK
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCEEEECCC
DPEHPVMVSNSKYWMGPDIIAATGLKSRVRDYGRVWDFGGKSAEICPIDWKGPKP
CCCCCEEEECCCEEECCCCEECCCHHHHHHHHHCEECCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
AKNRRADADRLPISQRIDQRMPNPKRRQSSPTEWAIKGELFLNCSCTVFCPCVVSLGAH
CCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCEEEEEEEEEECCHHEEHHHHHHCCCC
PPTEGHCHAWMAIAIDEGHFEGEDLAGLNIGLLVDIPGRMGEGNWKVAAYVDERASGKAY
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHH
NGILQIFSGAAGGTTGLFTMLVSEIIGAERAPVEIVREGNRRSIMIGRKIQGEIEMLAGK
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCEEEECCC
DPEHPVMVSNSKYWMGPDIIAATGLKSRVRDYGRVWDFGGKSAEICPIDWKGPKP
CCCCCEEEECCCEEECCCCEECCCHHHHHHHHHCEECCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA