| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is ggtA [H]
Identifier: 110679453
GI number: 110679453
Start: 2076320
End: 2077915
Strand: Reverse
Name: ggtA [H]
Synonym: RD1_2179
Alternate gene names: 110679453
Gene position: 2077915-2076320 (Counterclockwise)
Preceding gene: 110679454
Following gene: 110679451
Centisome position: 50.28
GC content: 62.47
Gene sequence:
>1596_bases ATGGAACTCAGCGCACATCACCCCTACCCCTCGCGTCGCTCTGCTGTTGCGGCGGACAACATCGTGTCATCCTCGCATCC GCTGGCCACGCAAGCCGGGGTGTCCATGATGGCGCGGGGCGGAAATGCGGTGGATGCTGCCCTTGCCACGGCGATCACGC TGACGGTGGTTGAGCCGACAGGCAATGGTATCGGTTCAGATGCCTTTGCCATTTTGTGGGATGGGCAGGACTTGCATGGG TTGAACGCATCGGGCCGCGCCCCGGCTGCCTATACGGCTGAGAGGTTTGCCGGGCTTGACCAGATACCAATGCACGGCTG GGGCTCTGTCACCGTGCCGGGGGCGGTGTCGGCATGGGTGGCGCTGTCGGATCGCTTTGGCAAATTGCCCTTTGCGGCCT TGTTTGAACCAGCGATCCGCTATGCGGAAAACGGATTTCCTGTCTCACCCGTGATTGCCAAACTATGGCAGCGCGCGGCA GAGCAACTGGCCGAACAGCCCGGCTTTGCCGATGCTTTCCTTCCCGGTGGCCGCGCCCCGCGCGCAGGCGAATATTTTCG CAGCACAGGTCACGCGCGTTCGCTGCGACTGATCGCCGAAACCAAGGGCACAGCCTTTTACGAAGGTGTGCTGGCCGAGG AAATCGCAGCCCATGCGCAGGCCCACGGCGGCGCGCTGACGGTGACCGATCTGGCCGCACACAGGGCAGATTGGTGCGGC ACGATCGCGCGCGATTTTGACGCGGTCTCGCTGCATGAAATCCCGCCCAATGGTCAGGGGATAGCAGCGCTGATGGGCCT GGGGATCCTGTCCCGGACCAACATCCGCGATCTTGACCCTGACAGCGCGCAGGCCTTCCATCTACAGATCGAGGCCATGA AACTTGCCCTGCGCGACGCCGAAGGATTCGTGGCGGATGCGGACCATATGACATCCGTCACCGTGCAGGACTTGCTGGAC GATGGGTATCTCGCAACGCGGGCGGCGGAAATCAATCTGGACACTGCGAGCGACTTCAAACCCGGCGCGCCGAAACGCGG CGGCACCGTGTATCTGAGCGCGGCAGATGCCAGCGGGATGATGGTGTCCTTCATTCAATCGAACTATATGGGGTTCGGGT CCGGCGTGGTTGTGCCAGATACCGGAATATCCATGCAGAACAGGGGTTTCGGATTTTCTCTTGATCCATCACATCAAAAC CACATCGCCCCCGGCAAACGCCCGTTTCATACGATTATCCCCGGCTTCCTCATGCGCGATGGCGCGCCTCTGATGAGTTT TGGGGTCATGGGCGGCCCCATGCAGGCGCAAGGGCATGTTCAGATGGTGCTGCGCACGCAACTCTGGGGCCAGGACCCGC AGATGGCGGTGGATGCCCCCCGCTGGCGCGTGACGCAAGGCCTCGGCGTTGCCTGCGAAACGACCATGGCCCCCGATACG ATTTCGACCCTGCGCGCGATGGGGCATGACATCACGCTGGAAACCCCGGACAATGCCTTTGGTTTTGGCGGCGCGCAGCT TATTCACCGCCTGCCGGGGCGCGGGTATGTCGCCGGGTCCGACCCGCGCAAAGACGGCTGCGCAATGGGGTTTTAA
Upstream 100 bases:
>100_bases CCAGCACGGTATCACTGGAAACACAACCACCCCGATTGACTCCGCGCGCGTCAGGCCACAGACCTTGGCACAACGACCAA ACCGCAGGACAGACCACCCC
Downstream 100 bases:
>100_bases ACGCGCTGCGTCAGGTAAATTTGCGGAACAGTTTGGTGCTGTCAAAGATCTCTTCCAGCTCCTGCATGCGCTCTTTGGTC TCGCCCCAATGCAGCCCCTG
Product: gamma-glutamyltranspeptidase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MELSAHHPYPSRRSAVAADNIVSSSHPLATQAGVSMMARGGNAVDAALATAITLTVVEPTGNGIGSDAFAILWDGQDLHG LNASGRAPAAYTAERFAGLDQIPMHGWGSVTVPGAVSAWVALSDRFGKLPFAALFEPAIRYAENGFPVSPVIAKLWQRAA EQLAEQPGFADAFLPGGRAPRAGEYFRSTGHARSLRLIAETKGTAFYEGVLAEEIAAHAQAHGGALTVTDLAAHRADWCG TIARDFDAVSLHEIPPNGQGIAALMGLGILSRTNIRDLDPDSAQAFHLQIEAMKLALRDAEGFVADADHMTSVTVQDLLD DGYLATRAAEINLDTASDFKPGAPKRGGTVYLSAADASGMMVSFIQSNYMGFGSGVVVPDTGISMQNRGFGFSLDPSHQN HIAPGKRPFHTIIPGFLMRDGAPLMSFGVMGGPMQAQGHVQMVLRTQLWGQDPQMAVDAPRWRVTQGLGVACETTMAPDT ISTLRAMGHDITLETPDNAFGFGGAQLIHRLPGRGYVAGSDPRKDGCAMGF
Sequences:
>Translated_531_residues MELSAHHPYPSRRSAVAADNIVSSSHPLATQAGVSMMARGGNAVDAALATAITLTVVEPTGNGIGSDAFAILWDGQDLHG LNASGRAPAAYTAERFAGLDQIPMHGWGSVTVPGAVSAWVALSDRFGKLPFAALFEPAIRYAENGFPVSPVIAKLWQRAA EQLAEQPGFADAFLPGGRAPRAGEYFRSTGHARSLRLIAETKGTAFYEGVLAEEIAAHAQAHGGALTVTDLAAHRADWCG TIARDFDAVSLHEIPPNGQGIAALMGLGILSRTNIRDLDPDSAQAFHLQIEAMKLALRDAEGFVADADHMTSVTVQDLLD DGYLATRAAEINLDTASDFKPGAPKRGGTVYLSAADASGMMVSFIQSNYMGFGSGVVVPDTGISMQNRGFGFSLDPSHQN HIAPGKRPFHTIIPGFLMRDGAPLMSFGVMGGPMQAQGHVQMVLRTQLWGQDPQMAVDAPRWRVTQGLGVACETTMAPDT ISTLRAMGHDITLETPDNAFGFGGAQLIHRLPGRGYVAGSDPRKDGCAMGF >Mature_531_residues MELSAHHPYPSRRSAVAADNIVSSSHPLATQAGVSMMARGGNAVDAALATAITLTVVEPTGNGIGSDAFAILWDGQDLHG LNASGRAPAAYTAERFAGLDQIPMHGWGSVTVPGAVSAWVALSDRFGKLPFAALFEPAIRYAENGFPVSPVIAKLWQRAA EQLAEQPGFADAFLPGGRAPRAGEYFRSTGHARSLRLIAETKGTAFYEGVLAEEIAAHAQAHGGALTVTDLAAHRADWCG TIARDFDAVSLHEIPPNGQGIAALMGLGILSRTNIRDLDPDSAQAFHLQIEAMKLALRDAEGFVADADHMTSVTVQDLLD DGYLATRAAEINLDTASDFKPGAPKRGGTVYLSAADASGMMVSFIQSNYMGFGSGVVVPDTGISMQNRGFGFSLDPSHQN HIAPGKRPFHTIIPGFLMRDGAPLMSFGVMGGPMQAQGHVQMVLRTQLWGQDPQMAVDAPRWRVTQGLGVACETTMAPDT ISTLRAMGHDITLETPDNAFGFGGAQLIHRLPGRGYVAGSDPRKDGCAMGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=558, Percent_Identity=27.5985663082437, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI73915090, Length=558, Percent_Identity=27.5985663082437, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI73915096, Length=558, Percent_Identity=27.5985663082437, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI73915094, Length=558, Percent_Identity=27.5985663082437, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI113429324, Length=557, Percent_Identity=26.7504488330341, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI113429326, Length=555, Percent_Identity=26.4864864864865, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI109148539, Length=415, Percent_Identity=26.9879518072289, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI153266885, Length=545, Percent_Identity=22.9357798165138, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI153266901, Length=546, Percent_Identity=22.8937728937729, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1789856, Length=550, Percent_Identity=28.7272727272727, Blast_Score=185, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17506189, Length=488, Percent_Identity=27.0491803278689, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI193208247, Length=503, Percent_Identity=27.6341948310139, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI193208245, Length=503, Percent_Identity=27.6341948310139, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI72000294, Length=485, Percent_Identity=23.9175257731959, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI212646519, Length=485, Percent_Identity=23.9175257731959, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17542894, Length=483, Percent_Identity=25.2587991718427, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24642670, Length=478, Percent_Identity=26.9874476987448, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI24642666, Length=478, Percent_Identity=26.9874476987448, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI161077880, Length=478, Percent_Identity=26.9874476987448, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI45551474, Length=478, Percent_Identity=26.9874476987448, Blast_Score=119, Evalue=8e-27, Organism=Drosophila melanogaster, GI161077878, Length=478, Percent_Identity=26.9874476987448, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI18859893, Length=502, Percent_Identity=25.6972111553785, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI161077496, Length=521, Percent_Identity=24.1842610364683, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859741, Length=485, Percent_Identity=23.7113402061856, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 56010; Mature: 56010
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSAHHPYPSRRSAVAADNIVSSSHPLATQAGVSMMARGGNAVDAALATAITLTVVEPT CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHEEEEEEEECCC GNGIGSDAFAILWDGQDLHGLNASGRAPAAYTAERFAGLDQIPMHGWGSVTVPGAVSAWV CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCHHHHHH ALSDRFGKLPFAALFEPAIRYAENGFPVSPVIAKLWQRAAEQLAEQPGFADAFLPGGRAP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RAGEYFRSTGHARSLRLIAETKGTAFYEGVLAEEIAAHAQAHGGALTVTDLAAHRADWCG CCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH TIARDFDAVSLHEIPPNGQGIAALMGLGILSRTNIRDLDPDSAQAFHLQIEAMKLALRDA HHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCC EGFVADADHMTSVTVQDLLDDGYLATRAAEINLDTASDFKPGAPKRGGTVYLSAADASGM CCCEECCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCH MVSFIQSNYMGFGSGVVVPDTGISMQNRGFGFSLDPSHQNHIAPGKRPFHTIIPGFLMRD HHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHCCHHHHCC GAPLMSFGVMGGPMQAQGHVQMVLRTQLWGQDPQMAVDAPRWRVTQGLGVACETTMAPDT CCCHHHHCCCCCCCCCCCHHEEEEEHHHCCCCCCEEECCCCEEECCCCCEEEECCCCCHH ISTLRAMGHDITLETPDNAFGFGGAQLIHRLPGRGYVAGSDPRKDGCAMGF HHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MELSAHHPYPSRRSAVAADNIVSSSHPLATQAGVSMMARGGNAVDAALATAITLTVVEPT CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHEEEEEEEECCC GNGIGSDAFAILWDGQDLHGLNASGRAPAAYTAERFAGLDQIPMHGWGSVTVPGAVSAWV CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCHHHHHH ALSDRFGKLPFAALFEPAIRYAENGFPVSPVIAKLWQRAAEQLAEQPGFADAFLPGGRAP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RAGEYFRSTGHARSLRLIAETKGTAFYEGVLAEEIAAHAQAHGGALTVTDLAAHRADWCG CCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH TIARDFDAVSLHEIPPNGQGIAALMGLGILSRTNIRDLDPDSAQAFHLQIEAMKLALRDA HHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCC EGFVADADHMTSVTVQDLLDDGYLATRAAEINLDTASDFKPGAPKRGGTVYLSAADASGM CCCEECCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCH MVSFIQSNYMGFGSGVVVPDTGISMQNRGFGFSLDPSHQNHIAPGKRPFHTIIPGFLMRD HHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHCCHHHHCC GAPLMSFGVMGGPMQAQGHVQMVLRTQLWGQDPQMAVDAPRWRVTQGLGVACETTMAPDT CCCHHHHCCCCCCCCCCCHHEEEEEHHHCCCCCCEEECCCCEEECCCCCEEEECCCCCHH ISTLRAMGHDITLETPDNAFGFGGAQLIHRLPGRGYVAGSDPRKDGCAMGF HHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]