Click here to switch to the map view.

The map label for this gene is 110679451

Identifier: 110679451

GI number: 110679451

Start: 2074558

End: 2075322

Strand: Reverse

Name: 110679451

Synonym: RD1_2177

Alternate gene names: NA

Gene position: 2075322-2074558 (Counterclockwise)

Preceding gene: 110679453

Following gene: 110679450

Centisome position: 50.21

GC content: 60.65

Gene sequence:

>765_bases
ATGAATCAGTCGCAAAACATAGATGATGACGCAGTGGTCGAGGTGCTCAATGCCGCGGGAACCTCGGATATCGTGCTGGT
CTGCGAACATGCCAGCGCCTTCATCCCGCCTGCGTTGAGCGATCTGGGGCTGTCTGACGCGGCGAAGCGGAGCCATGCGG
CGTGGGACCCCGGCGCGCGCGCGGTGGCTGTGCTGATGTCCCGACAGTTGGACGCGCCTCTCGTTGCATCGAAAGTGTCG
CGGCTGGTCTATGATTGCAACCGCCCGCCCCATGTGCCGAGCGCGATGATTGAGCGCAGCGAAGTGTTCGACATTCCCGG
CAACCAAAATCTGACGCAAGAGGACCGCAAGACCCGGGCGGCCAGATATTACACCCCGTTTCGAGACCGGCTGACACAGG
TTCTGGCCGCAAAACCCGATCCCATCATCGTAACGATCCATAGTTTCACACGCATCTATCAGGGGATCACCAGAGAGGTC
GAGATCGGCATCCTGCATGATCAGGACACGCGGCTTGCCGATGCGATGCTGGAAGCCGACACCGGCAGATTTGTGACCCG
GCGCAATGAACCCTACGGGCCGGCAGACGGCGTGACGCACACTCTGAAGGAGCACGCGTTGCCCCATGGCCGCCGCAATG
TGATGATCGAAATCCGCAACGATCTGATTGAAACAGAGGACACGCAGACCGCCATGGCGACGCTGATGTCGCGTTGGGTG
GCGGAGGCTGTCGCGCACACCAAGGGCCTTTCATGCAAGGTCTGA

Upstream 100 bases:

>100_bases
GTTCAGAAAATTACCAGCAGCGGCACGTCTGTGATAAATTTTTCACAATTTTGTTGACATATCTGCGCTGAGGCAAGCAC
TTTATCGCTCAGGGGTGCGG

Downstream 100 bases:

>100_bases
TGCGCGGATACATACGCGGCGTCGATGCGCTCAACTATCGCCTTGGGCGCGTGGTGATGTATGGAATTTTCGTGCTGATG
GCGATCCTGCTGTGGTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNQSQNIDDDAVVEVLNAAGTSDIVLVCEHASAFIPPALSDLGLSDAAKRSHAAWDPGARAVAVLMSRQLDAPLVASKVS
RLVYDCNRPPHVPSAMIERSEVFDIPGNQNLTQEDRKTRAARYYTPFRDRLTQVLAAKPDPIIVTIHSFTRIYQGITREV
EIGILHDQDTRLADAMLEADTGRFVTRRNEPYGPADGVTHTLKEHALPHGRRNVMIEIRNDLIETEDTQTAMATLMSRWV
AEAVAHTKGLSCKV

Sequences:

>Translated_254_residues
MNQSQNIDDDAVVEVLNAAGTSDIVLVCEHASAFIPPALSDLGLSDAAKRSHAAWDPGARAVAVLMSRQLDAPLVASKVS
RLVYDCNRPPHVPSAMIERSEVFDIPGNQNLTQEDRKTRAARYYTPFRDRLTQVLAAKPDPIIVTIHSFTRIYQGITREV
EIGILHDQDTRLADAMLEADTGRFVTRRNEPYGPADGVTHTLKEHALPHGRRNVMIEIRNDLIETEDTQTAMATLMSRWV
AEAVAHTKGLSCKV
>Mature_254_residues
MNQSQNIDDDAVVEVLNAAGTSDIVLVCEHASAFIPPALSDLGLSDAAKRSHAAWDPGARAVAVLMSRQLDAPLVASKVS
RLVYDCNRPPHVPSAMIERSEVFDIPGNQNLTQEDRKTRAARYYTPFRDRLTQVLAAKPDPIIVTIHSFTRIYQGITREV
EIGILHDQDTRLADAMLEADTGRFVTRRNEPYGPADGVTHTLKEHALPHGRRNVMIEIRNDLIETEDTQTAMATLMSRWV
AEAVAHTKGLSCKV

Specific function: Unknown

COG id: COG3931

COG function: function code E; Predicted N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28072; Mature: 28072

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSQNIDDDAVVEVLNAAGTSDIVLVCEHASAFIPPALSDLGLSDAAKRSHAAWDPGAR
CCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHCCCCCCCCHH
AVAVLMSRQLDAPLVASKVSRLVYDCNRPPHVPSAMIERSEVFDIPGNQNLTQEDRKTRA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHH
ARYYTPFRDRLTQVLAAKPDPIIVTIHSFTRIYQGITREVEIGILHDQDTRLADAMLEAD
HHCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCC
TGRFVTRRNEPYGPADGVTHTLKEHALPHGRRNVMIEIRNDLIETEDTQTAMATLMSRWV
CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH
AEAVAHTKGLSCKV
HHHHHHHCCCCCCC
>Mature Secondary Structure
MNQSQNIDDDAVVEVLNAAGTSDIVLVCEHASAFIPPALSDLGLSDAAKRSHAAWDPGAR
CCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHCCCCCCCCHH
AVAVLMSRQLDAPLVASKVSRLVYDCNRPPHVPSAMIERSEVFDIPGNQNLTQEDRKTRA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHH
ARYYTPFRDRLTQVLAAKPDPIIVTIHSFTRIYQGITREVEIGILHDQDTRLADAMLEAD
HHCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCC
TGRFVTRRNEPYGPADGVTHTLKEHALPHGRRNVMIEIRNDLIETEDTQTAMATLMSRWV
CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH
AEAVAHTKGLSCKV
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA